Protein–RNA interactions for Protein: P54730

UBX4, UBX domain-containing protein 4, yeastyeast

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBX4P54730 snR72snR72 98 nt1.77□□□□□ -2.13
UBX4P54730 YLR140WYLR140W 327 nt1.77□□□□□ -2.13
UBX4P54730 YOL160WYOL160W 342 nt1.77□□□□□ -2.13
UBX4P54730 YOR376WYOR376W 369 nt1.77□□□□□ -2.13
UBX4P54730 YLR035C-AYLR035C-A 3468 nt1.77□□□□□ -2.13
UBX4P54730 KAP122YGL016W 3246 nt1.76□□□□□ -2.13
UBX4P54730 YDR426CYDR426C 378 nt1.76□□□□□ -2.13
UBX4P54730 YDR524W-CYDR524W-C 90 nt1.76□□□□□ -2.13
UBX4P54730 VPS55YJR044C 423 nt1.76□□□□□ -2.13
UBX4P54730 YMR175W-AYMR175W-A 195 nt1.76□□□□□ -2.13
UBX4P54730 MEC1YBR136W 7107 nt1.76□□□□□ -2.13
UBX4P54730 NUT1YGL151W 3399 nt1.76□□□□□ -2.13
UBX4P54730 YMR247W-AYMR247W-A 144 nt1.75□□□□□ -2.13
UBX4P54730 TIM18YOR297C 579 nt1.75□□□□□ -2.13
UBX4P54730 SMC4YLR086W 4257 nt1.74□□□□□ -2.13
UBX4P54730 YHR007C-AYHR007C-A 216 nt1.74□□□□□ -2.13
UBX4P54730 HTB2YBL002W 396 nt1.74□□□□□ -2.13
UBX4P54730 VPS54YDR027C 2670 nt1.74□□□□□ -2.13
UBX4P54730 YCS4YLR272C 3531 nt1.74□□□□□ -2.13
UBX4P54730 KIP1YBL063W 3336 nt1.73□□□□□ -2.13
UBX4P54730 SXM1YDR395W 2835 nt1.73□□□□□ -2.13
UBX4P54730 YGR109W-BYGR109W-B 4644 nt1.73□□□□□ -2.13
UBX4P54730 NPC2YDL046W 522 nt1.73□□□□□ -2.13
UBX4P54730 RPL35AYDL191W 363 nt1.73□□□□□ -2.13
UBX4P54730 YGL217CYGL217C 342 nt1.73□□□□□ -2.13
UBX4P54730 YJL135WYJL135W 318 nt1.73□□□□□ -2.13
UBX4P54730 YMR290W-AYMR290W-A 348 nt1.73□□□□□ -2.13
UBX4P54730 SLX4YLR135W 2247 nt1.72□□□□□ -2.13
UBX4P54730 IRA1YBR140C 9279 nt1.72□□□□□ -2.13
UBX4P54730 YLL054CYLL054C 2532 nt1.72□□□□□ -2.13
UBX4P54730 ATG11YPR049C 3537 nt1.72□□□□□ -2.13
UBX4P54730 MAD1YGL086W 2250 nt1.72□□□□□ -2.13
UBX4P54730 CFT1YDR301W 4074 nt1.71□□□□□ -2.14
UBX4P54730 SCW11YGL028C 1629 nt1.71□□□□□ -2.14
UBX4P54730 Q0142Q0142 177 nt1.71□□□□□ -2.14
UBX4P54730 YAF9YNL107W 681 nt1.71□□□□□ -2.14
UBX4P54730 SBE22YHR103W 2559 nt1.69□□□□□ -2.14
UBX4P54730 YDR102CYDR102C 333 nt1.69□□□□□ -2.14
UBX4P54730 RAD34YDR314C 2079 nt1.68□□□□□ -2.14
UBX4P54730 NIP100YPL174C 2607 nt1.68□□□□□ -2.14
UBX4P54730 TAR1YLR154W-C 375 nt1.68□□□□□ -2.14
UBX4P54730 YOR161W-BYOR161W-B 261 nt1.68□□□□□ -2.14
UBX4P54730 SLI15YBR156C 2097 nt1.68□□□□□ -2.14
UBX4P54730 BRR2YER172C 6492 nt1.68□□□□□ -2.14
UBX4P54730 EST2YLR318W 2655 nt1.67□□□□□ -2.14
UBX4P54730 YSY6YBR162W-A 198 nt1.66□□□□□ -2.14
UBX4P54730 PMD1YER132C 5262 nt1.65□□□□□ -2.14
UBX4P54730 YDR169C-AYDR169C-A 150 nt1.65□□□□□ -2.15
UBX4P54730 MAM33YIL070C 801 nt1.65□□□□□ -2.15
UBX4P54730 YIR044CYIR044C 186 nt1.65□□□□□ -2.15
UBX4P54730 YJL015CYJL015C 285 nt1.65□□□□□ -2.15
UBX4P54730 AZF1YOR113W 2745 nt1.64□□□□□ -2.15
UBX4P54730 YAR029WYAR029W 225 nt1.64□□□□□ -2.15
UBX4P54730 YPL225WYPL225W 441 nt1.64□□□□□ -2.15
UBX4P54730 AIM44YPL158C 2277 nt1.64□□□□□ -2.15
UBX4P54730 YDL211CYDL211C 1119 nt1.63□□□□□ -2.15
UBX4P54730 YKL118WYKL118W 312 nt1.63□□□□□ -2.15
UBX4P54730 YKL136WYKL136W 399 nt1.63□□□□□ -2.15
UBX4P54730 MPT5YGL178W 2580 nt1.63□□□□□ -2.15
UBX4P54730 COG4YPR105C 2586 nt1.63□□□□□ -2.15
UBX4P54730 LCD1YDR499W 2244 nt1.63□□□□□ -2.15
UBX4P54730 SPC98YNL126W 2541 nt1.63□□□□□ -2.15
UBX4P54730 ALY2YJL084C 3141 nt1.62□□□□□ -2.15
UBX4P54730 YDR048CYDR048C 315 nt1.62□□□□□ -2.15
UBX4P54730 TRM732YMR259C 4263 nt1.62□□□□□ -2.15
UBX4P54730 CUL3YGR003W 2235 nt1.62□□□□□ -2.15
UBX4P54730 MSN5YDR335W 3675 nt1.61□□□□□ -2.15
UBX4P54730 COA6YMR244C-A 315 nt1.61□□□□□ -2.15
UBX4P54730 snR14snR14 160 nt1.61□□□□□ -2.15
UBX4P54730 SPT21YMR179W 2277 nt1.61□□□□□ -2.15
UBX4P54730 PIP2YOR363C 2991 nt1.6□□□□□ -2.15
UBX4P54730 OST1YJL002C 1431 nt1.6□□□□□ -2.15
UBX4P54730 YDR183C-AYDR183C-A 258 nt1.6□□□□□ -2.15
UBX4P54730 snR36snR36 182 nt1.6□□□□□ -2.15
UBX4P54730 SWI4YER111C 3282 nt1.6□□□□□ -2.15
UBX4P54730 MDS3YGL197W 4464 nt1.6□□□□□ -2.15
UBX4P54730 SPC110YDR356W 2835 nt1.59□□□□□ -2.16
UBX4P54730 TRM3YDL112W 4311 nt1.59□□□□□ -2.16
UBX4P54730 MMS4YBR098W 2076 nt1.59□□□□□ -2.16
UBX4P54730 PKH2YOL100W 3246 nt1.58□□□□□ -2.16
UBX4P54730 IFH1YLR223C 3258 nt1.57□□□□□ -2.16
UBX4P54730 GPG1YGL121C 381 nt1.57□□□□□ -2.16
UBX4P54730 ANS1YHR126C 480 nt1.57□□□□□ -2.16
UBX4P54730 RPL34BYIL052C 366 nt1.57□□□□□ -2.16
UBX4P54730 PTP2YOR208W 2253 nt1.56□□□□□ -2.16
UBX4P54730 CLU1YMR012W 3834 nt1.56□□□□□ -2.16
UBX4P54730 PIK1YNL267W 3201 nt1.56□□□□□ -2.16
UBX4P54730 tQ(UUG)E2tQ(UUG)E2 72 nt1.56□□□□□ -2.16
UBX4P54730 YJR011CYJR011C 786 nt1.56□□□□□ -2.16
UBX4P54730 NUP188YML103C 4968 nt1.55□□□□□ -2.16
UBX4P54730 YLL007CYLL007C 1998 nt1.54□□□□□ -2.16
UBX4P54730 HTL1YCR020W-B 237 nt1.54□□□□□ -2.16
UBX4P54730 NHP2YDL208W 471 nt1.54□□□□□ -2.16
UBX4P54730 YDR413CYDR413C 576 nt1.54□□□□□ -2.16
UBX4P54730 YBL008W-AYBL008W-A 240 nt1.54□□□□□ -2.16
UBX4P54730 YPR063CYPR063C 423 nt1.54□□□□□ -2.16
UBX4P54730 YCK3YER123W 1575 nt1.54□□□□□ -2.16
UBX4P54730 CHS1YNL192W 3396 nt1.54□□□□□ -2.16
UBX4P54730 NUP145YGL092W 3954 nt1.54□□□□□ -2.16
UBX4P54730 CAT8YMR280C 4302 nt1.53□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 35 ms