Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 AC006128.1-201ENST00000624704 1661 ntBASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV23-1A0A0A0MS06 AIRN-201ENST00000601203 4374 ntBASIC16.93■□□□□ 0.3
TRBV23-1A0A0A0MS06 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV23-1A0A0A0MS06 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV23-1A0A0A0MS06 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRBV23-1A0A0A0MS06 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
TRBV23-1A0A0A0MS06 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TRBV23-1A0A0A0MS06 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.93■□□□□ 0.3
TRBV23-1A0A0A0MS06 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV23-1A0A0A0MS06 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV23-1A0A0A0MS06 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV23-1A0A0A0MS06 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV23-1A0A0A0MS06 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV23-1A0A0A0MS06 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV23-1A0A0A0MS06 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
TRBV23-1A0A0A0MS06 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV23-1A0A0A0MS06 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.93■□□□□ 0.3
TRBV23-1A0A0A0MS06 AC087633.2-202ENST00000565166 1439 ntBASIC16.93■□□□□ 0.3
TRBV23-1A0A0A0MS06 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV23-1A0A0A0MS06 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV23-1A0A0A0MS06 CYP21A1P-202ENST00000354927 1481 ntBASIC16.93■□□□□ 0.3
TRBV23-1A0A0A0MS06 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV23-1A0A0A0MS06 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 MKRN4P-201ENST00000444706 1521 ntBASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 SLC29A4P1-201ENST00000398760 971 ntBASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 AC083906.2-201ENST00000511578 360 ntBASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 AC010980.2-201ENST00000587099 1412 ntBASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 AC106820.2-201ENST00000563775 3264 ntBASIC16.92■□□□□ 0.3
TRBV23-1A0A0A0MS06 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 PLK5-205ENST00000642079 1969 ntBASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV23-1A0A0A0MS06 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 AC093787.1-201ENST00000450396 207 ntBASIC16.9■□□□□ 0.3
TRBV23-1A0A0A0MS06 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms