Protein–RNA interactions for Protein: P53540

SPC98, Spindle pole body component SPC98, yeastyeast

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPC98P53540 IRR1YIL026C 3453 nt2.32□□□□□ -2.04
SPC98P53540 RIC1YLR039C 3171 nt2.32□□□□□ -2.04
SPC98P53540 VPS34YLR240W 2628 nt2.32□□□□□ -2.04
SPC98P53540 GIS1YDR096W 2685 nt2.32□□□□□ -2.04
SPC98P53540 AFI1YOR129C 2682 nt2.32□□□□□ -2.04
SPC98P53540 PEP3YLR148W 2757 nt2.32□□□□□ -2.04
SPC98P53540 SPF1YEL031W 3648 nt2.31□□□□□ -2.04
SPC98P53540 PHO2YDL106C 1680 nt2.31□□□□□ -2.04
SPC98P53540 VPH1YOR270C 2523 nt2.31□□□□□ -2.04
SPC98P53540 SWA2YDR320C 2007 nt2.31□□□□□ -2.04
SPC98P53540 BRP1YGL007W 378 nt2.31□□□□□ -2.04
SPC98P53540 RPS29AYLR388W 171 nt2.31□□□□□ -2.04
SPC98P53540 PXA2YKL188C 2562 nt2.31□□□□□ -2.04
SPC98P53540 YBR184WYBR184W 1572 nt2.31□□□□□ -2.04
SPC98P53540 SMY1YKL079W 1971 nt2.3□□□□□ -2.04
SPC98P53540 VMR1YHL035C 4779 nt2.3□□□□□ -2.04
SPC98P53540 UTP22YGR090W 3714 nt2.3□□□□□ -2.04
SPC98P53540 YEL043WYEL043W 2871 nt2.3□□□□□ -2.04
SPC98P53540 FAR11YNL127W 2862 nt2.3□□□□□ -2.04
SPC98P53540 SSS1YDR086C 243 nt2.3□□□□□ -2.04
SPC98P53540 VIK1YPL253C 1944 nt2.3□□□□□ -2.04
SPC98P53540 CFT2YLR115W 2580 nt2.3□□□□□ -2.04
SPC98P53540 PLC1YPL268W 2610 nt2.3□□□□□ -2.04
SPC98P53540 TRS130YMR218C 3309 nt2.29□□□□□ -2.04
SPC98P53540 YEF3YLR249W 3135 nt2.29□□□□□ -2.04
SPC98P53540 INA22YIR024C 651 nt2.29□□□□□ -2.04
SPC98P53540 YLR146W-AYLR146W-A 189 nt2.29□□□□□ -2.04
SPC98P53540 KRE33YNL132W 3171 nt2.29□□□□□ -2.04
SPC98P53540 GRR1YJR090C 3456 nt2.29□□□□□ -2.04
SPC98P53540 IRA2YOL081W 9240 nt2.28□□□□□ -2.04
SPC98P53540 CRM1YGR218W 3255 nt2.28□□□□□ -2.04
SPC98P53540 YDR286CYDR286C 345 nt2.28□□□□□ -2.04
SPC98P53540 YNL114CYNL114C 372 nt2.28□□□□□ -2.04
SPC98P53540 SIR3YLR442C 2937 nt2.28□□□□□ -2.04
SPC98P53540 EDS1YBR033W 2760 nt2.28□□□□□ -2.04
SPC98P53540 UBR1YGR184C 5853 nt2.28□□□□□ -2.04
SPC98P53540 SCH9YHR205W 2475 nt2.28□□□□□ -2.04
SPC98P53540 TFC3YAL001C 3483 nt2.27□□□□□ -2.05
SPC98P53540 SNF5YBR289W 2718 nt2.27□□□□□ -2.05
SPC98P53540 EMP24YGL200C 612 nt2.27□□□□□ -2.05
SPC98P53540 VPS55YJR044C 423 nt2.27□□□□□ -2.05
SPC98P53540 CDC53YDL132W 2448 nt2.27□□□□□ -2.05
SPC98P53540 AI5_ALPHAQ0070 1893 nt2.26□□□□□ -2.05
SPC98P53540 INP2YMR163C 2118 nt2.26□□□□□ -2.05
SPC98P53540 ATP8Q0080 147 nt2.26□□□□□ -2.05
SPC98P53540 YJL150WYJL150W 303 nt2.26□□□□□ -2.05
SPC98P53540 PDE2YOR360C 1581 nt2.26□□□□□ -2.05
SPC98P53540 MUK1YPL070W 1839 nt2.26□□□□□ -2.05
SPC98P53540 RPH1YER169W 2391 nt2.25□□□□□ -2.05
SPC98P53540 DNF1YER166W 4716 nt2.25□□□□□ -2.05
SPC98P53540 YDL007C-AYDL007C-A 258 nt2.25□□□□□ -2.05
SPC98P53540 YER088C-AYER088C-A 324 nt2.25□□□□□ -2.05
SPC98P53540 VPS13YLL040C 9435 nt2.25□□□□□ -2.05
SPC98P53540 UBP15YMR304W 3693 nt2.24□□□□□ -2.05
SPC98P53540 RRT15YLR162W-A 189 nt2.24□□□□□ -2.05
SPC98P53540 YBL083CYBL083C 426 nt2.24□□□□□ -2.05
SPC98P53540 YNL338WYNL338W 159 nt2.24□□□□□ -2.05
SPC98P53540 MGM1YOR211C 2646 nt2.23□□□□□ -2.05
SPC98P53540 GIP3YPL137C 3831 nt2.23□□□□□ -2.05
SPC98P53540 RAV1YJR033C 4074 nt2.23□□□□□ -2.05
SPC98P53540 VPS54YDR027C 2670 nt2.23□□□□□ -2.05
SPC98P53540 SPT21YMR179W 2277 nt2.23□□□□□ -2.05
SPC98P53540 YLR342W-AYLR342W-A 174 nt2.23□□□□□ -2.05
SPC98P53540 MPT5YGL178W 2580 nt2.23□□□□□ -2.05
SPC98P53540 MNL2YLR057W 2550 nt2.23□□□□□ -2.05
SPC98P53540 INO80YGL150C 4470 nt2.23□□□□□ -2.05
SPC98P53540 REV3YPL167C 4515 nt2.23□□□□□ -2.05
SPC98P53540 RPL42BYHR141C 321 nt2.22□□□□□ -2.05
SPC98P53540 RPL42AYNL162W 321 nt2.22□□□□□ -2.05
SPC98P53540 YOR394C-AYOR394C-A 168 nt2.22□□□□□ -2.05
SPC98P53540 TRS65YGR166W 1683 nt2.22□□□□□ -2.05
SPC98P53540 SWI6YLR182W 2412 nt2.21□□□□□ -2.06
SPC98P53540 MRP10YDL045W-A 288 nt2.21□□□□□ -2.06
SPC98P53540 YJL135WYJL135W 318 nt2.21□□□□□ -2.06
SPC98P53540 PAU8YAL068C 363 nt2.21□□□□□ -2.06
SPC98P53540 PAU20YOL161C 363 nt2.21□□□□□ -2.06
SPC98P53540 NIP100YPL174C 2607 nt2.21□□□□□ -2.06
SPC98P53540 PRP39YML046W 1890 nt2.2□□□□□ -2.06
SPC98P53540 RFX1YLR176C 2436 nt2.2□□□□□ -2.06
SPC98P53540 SET2YJL168C 2202 nt2.2□□□□□ -2.06
SPC98P53540 OLI1Q0130 231 nt2.2□□□□□ -2.06
SPC98P53540 YJL052C-AYJL052C-A 120 nt2.2□□□□□ -2.06
SPC98P53540 YLR140WYLR140W 327 nt2.2□□□□□ -2.06
SPC98P53540 YNL097C-BYNL097C-B 123 nt2.2□□□□□ -2.06
SPC98P53540 COS111YBR203W 2775 nt2.2□□□□□ -2.06
SPC98P53540 NUP100YKL068W 2880 nt2.2□□□□□ -2.06
SPC98P53540 ZRG8YER033C 3231 nt2.19□□□□□ -2.06
SPC98P53540 GYP5YPL249C 2685 nt2.19□□□□□ -2.06
SPC98P53540 YCR043CYCR043C 384 nt2.19□□□□□ -2.06
SPC98P53540 YRB1YDR002W 606 nt2.19□□□□□ -2.06
SPC98P53540 YPR092WYPR092W 306 nt2.19□□□□□ -2.06
SPC98P53540 SLM1YIL105C 2061 nt2.19□□□□□ -2.06
SPC98P53540 CHC1YGL206C 4962 nt2.18□□□□□ -2.06
SPC98P53540 snR72snR72 98 nt2.18□□□□□ -2.06
SPC98P53540 YEL014CYEL014C 306 nt2.18□□□□□ -2.06
SPC98P53540 RPS17AYML024W 411 nt2.18□□□□□ -2.06
SPC98P53540 YOR376WYOR376W 369 nt2.18□□□□□ -2.06
SPC98P53540 SSD1YDR293C 3753 nt2.18□□□□□ -2.06
SPC98P53540 TUS1YLR425W 3924 nt2.18□□□□□ -2.06
SPC98P53540 snR74snR74 88 nt2.17□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 25.1 ms