Protein–RNA interactions for Protein: P09007

SRD1, Pre-rRNA-processing protein SRD1, yeastyeast

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRD1P09007 LCL1YPL056C 306 nt2.39□□□□□ -2.03
SRD1P09007 SPF1YEL031W 3648 nt2.39□□□□□ -2.03
SRD1P09007 INP2YMR163C 2118 nt2.39□□□□□ -2.03
SRD1P09007 SSD1YDR293C 3753 nt2.39□□□□□ -2.03
SRD1P09007 SIR4YDR227W 4077 nt2.39□□□□□ -2.03
SRD1P09007 YGR250CYGR250C 2346 nt2.39□□□□□ -2.03
SRD1P09007 YDR341CYDR341C 1824 nt2.38□□□□□ -2.03
SRD1P09007 PAU18YLL064C 363 nt2.38□□□□□ -2.03
SRD1P09007 PAU6YNR076W 363 nt2.38□□□□□ -2.03
SRD1P09007 RTT107YHR154W 3213 nt2.38□□□□□ -2.03
SRD1P09007 RAD61YDR014W 1944 nt2.37□□□□□ -2.03
SRD1P09007 MRP10YDL045W-A 288 nt2.37□□□□□ -2.03
SRD1P09007 BRP1YGL007W 378 nt2.37□□□□□ -2.03
SRD1P09007 YGL188C-AYGL188C-A 141 nt2.37□□□□□ -2.03
SRD1P09007 YHR073W-AYHR073W-A 177 nt2.37□□□□□ -2.03
SRD1P09007 LYS14YDR034C 2373 nt2.37□□□□□ -2.03
SRD1P09007 SPG3YDR504C 384 nt2.36□□□□□ -2.03
SRD1P09007 MVP1YMR004W 1536 nt2.36□□□□□ -2.03
SRD1P09007 RTT101YJL047C 2529 nt2.35□□□□□ -2.03
SRD1P09007 PET309YLR067C 2898 nt2.35□□□□□ -2.03
SRD1P09007 YJL052C-AYJL052C-A 120 nt2.35□□□□□ -2.03
SRD1P09007 YKR075W-AYKR075W-A 270 nt2.35□□□□□ -2.03
SRD1P09007 RPB10YOR210W 213 nt2.35□□□□□ -2.03
SRD1P09007 YCL023CYCL023C 348 nt2.35□□□□□ -2.03
SRD1P09007 SYH1YPL105C 2550 nt2.35□□□□□ -2.03
SRD1P09007 NAM7YMR080C 2916 nt2.35□□□□□ -2.03
SRD1P09007 ATG11YPR049C 3537 nt2.34□□□□□ -2.03
SRD1P09007 HCS1YKL017C 2052 nt2.34□□□□□ -2.03
SRD1P09007 YCL046WYCL046W 324 nt2.34□□□□□ -2.03
SRD1P09007 PLC1YPL268W 2610 nt2.34□□□□□ -2.04
SRD1P09007 UBP1YDL122W 2430 nt2.33□□□□□ -2.04
SRD1P09007 ZRG17YNR039C 1818 nt2.33□□□□□ -2.04
SRD1P09007 DCP2YNL118C 2913 nt2.33□□□□□ -2.04
SRD1P09007 IRA2YOL081W 9240 nt2.33□□□□□ -2.04
SRD1P09007 DNF1YER166W 4716 nt2.33□□□□□ -2.04
SRD1P09007 snR60snR60 104 nt2.33□□□□□ -2.04
SRD1P09007 YEL020C-BYEL020C-B 198 nt2.33□□□□□ -2.04
SRD1P09007 TRA1YHR099W 11235 nt2.33□□□□□ -2.04
SRD1P09007 SCW11YGL028C 1629 nt2.32□□□□□ -2.04
SRD1P09007 RPL37BYDR500C 267 nt2.32□□□□□ -2.04
SRD1P09007 snR49snR49 165 nt2.32□□□□□ -2.04
SRD1P09007 SAP185YJL098W 3177 nt2.31□□□□□ -2.04
SRD1P09007 IST2YBR086C 2841 nt2.31□□□□□ -2.04
SRD1P09007 UFD4YKL010C 4452 nt2.31□□□□□ -2.04
SRD1P09007 YER088C-AYER088C-A 324 nt2.31□□□□□ -2.04
SRD1P09007 YHR071C-AYHR071C-A 321 nt2.31□□□□□ -2.04
SRD1P09007 ARP7YPR034W 1434 nt2.31□□□□□ -2.04
SRD1P09007 ZIP1YDR285W 2628 nt2.31□□□□□ -2.04
SRD1P09007 LCD1YDR499W 2244 nt2.3□□□□□ -2.04
SRD1P09007 MAK10YEL053C 2202 nt2.3□□□□□ -2.04
SRD1P09007 YDR003W-AYDR003W-A 123 nt2.29□□□□□ -2.04
SRD1P09007 YJL135WYJL135W 318 nt2.29□□□□□ -2.04
SRD1P09007 SDH2YLL041C 801 nt2.29□□□□□ -2.04
SRD1P09007 KOG1YHR186C 4674 nt2.29□□□□□ -2.04
SRD1P09007 NOP14YDL148C 2433 nt2.29□□□□□ -2.04
SRD1P09007 BRE1YDL074C 2103 nt2.29□□□□□ -2.04
SRD1P09007 YFR016CYFR016C 3702 nt2.28□□□□□ -2.04
SRD1P09007 YLL032CYLL032C 2478 nt2.28□□□□□ -2.04
SRD1P09007 BNI1YNL271C 5862 nt2.28□□□□□ -2.04
SRD1P09007 GYP5YPL249C 2685 nt2.28□□□□□ -2.04
SRD1P09007 YCR087C-AYCR087C-A 462 nt2.27□□□□□ -2.05
SRD1P09007 snR72snR72 98 nt2.27□□□□□ -2.05
SRD1P09007 tM(CAU)Q1tM(CAU)Q1 76 nt2.27□□□□□ -2.05
SRD1P09007 YOL098CYOL098C 3114 nt2.27□□□□□ -2.05
SRD1P09007 MCD1YDL003W 1701 nt2.26□□□□□ -2.05
SRD1P09007 JLP2YMR132C 627 nt2.26□□□□□ -2.05
SRD1P09007 YMR194C-AYMR194C-A 225 nt2.26□□□□□ -2.05
SRD1P09007 YNL028WYNL028W 318 nt2.26□□□□□ -2.05
SRD1P09007 CHC1YGL206C 4962 nt2.26□□□□□ -2.05
SRD1P09007 IRC8YJL051W 2469 nt2.25□□□□□ -2.05
SRD1P09007 YBR064WYBR064W 429 nt2.25□□□□□ -2.05
SRD1P09007 SPT21YMR179W 2277 nt2.25□□□□□ -2.05
SRD1P09007 TDA9YML081W 3756 nt2.25□□□□□ -2.05
SRD1P09007 CTR9YOL145C 3234 nt2.25□□□□□ -2.05
SRD1P09007 SAS3YBL052C 2496 nt2.24□□□□□ -2.05
SRD1P09007 snR80snR80 171 nt2.24□□□□□ -2.05
SRD1P09007 SSS1YDR086C 243 nt2.24□□□□□ -2.05
SRD1P09007 CSE2YNR010W 450 nt2.24□□□□□ -2.05
SRD1P09007 YOL155W-AYOL155W-A 135 nt2.24□□□□□ -2.05
SRD1P09007 IRE1YHR079C 3348 nt2.24□□□□□ -2.05
SRD1P09007 CAT2YML042W 2013 nt2.24□□□□□ -2.05
SRD1P09007 VIK1YPL253C 1944 nt2.23□□□□□ -2.05
SRD1P09007 CDC36YDL165W 576 nt2.23□□□□□ -2.05
SRD1P09007 ABF2YMR072W 552 nt2.23□□□□□ -2.05
SRD1P09007 DGR1YNL130C-A 147 nt2.23□□□□□ -2.05
SRD1P09007 YOL160WYOL160W 342 nt2.23□□□□□ -2.05
SRD1P09007 MDM20YOL076W 2391 nt2.23□□□□□ -2.05
SRD1P09007 HMI1YOL095C 2121 nt2.23□□□□□ -2.05
SRD1P09007 HER1YOR227W 3741 nt2.22□□□□□ -2.05
SRD1P09007 MSC6YOR354C 2079 nt2.22□□□□□ -2.05
SRD1P09007 BUD2YKL092C 3315 nt2.22□□□□□ -2.05
SRD1P09007 NIP100YPL174C 2607 nt2.21□□□□□ -2.05
SRD1P09007 MLH3YPL164C 2148 nt2.21□□□□□ -2.06
SRD1P09007 MSH5YDL154W 2706 nt2.21□□□□□ -2.06
SRD1P09007 snR55snR55 98 nt2.21□□□□□ -2.06
SRD1P09007 YER172C-AYER172C-A 381 nt2.21□□□□□ -2.06
SRD1P09007 BLI1YKL061W 342 nt2.21□□□□□ -2.06
SRD1P09007 YOR108C-AYOR108C-A 210 nt2.21□□□□□ -2.06
SRD1P09007 STH1YIL126W 4080 nt2.21□□□□□ -2.06
SRD1P09007 SRP14YDL092W 441 nt2.2□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 71.9 ms