Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 SLC29A4P1-201ENST00000398760 971 ntBASIC19.48■□□□□ 0.71
NIPAL1Q6NVV3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.48■□□□□ 0.71
NIPAL1Q6NVV3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NIPAL1Q6NVV3 AC083906.2-201ENST00000511578 360 ntBASIC19.48■□□□□ 0.71
NIPAL1Q6NVV3 AC105036.2-201ENST00000569468 176 ntBASIC19.48■□□□□ 0.71
NIPAL1Q6NVV3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.48■□□□□ 0.71
NIPAL1Q6NVV3 AL050303.2-201ENST00000619798 666 ntBASIC19.48■□□□□ 0.71
NIPAL1Q6NVV3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
NIPAL1Q6NVV3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NIPAL1Q6NVV3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NIPAL1Q6NVV3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NIPAL1Q6NVV3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.47■□□□□ 0.71
NIPAL1Q6NVV3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NIPAL1Q6NVV3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NIPAL1Q6NVV3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.47■□□□□ 0.71
NIPAL1Q6NVV3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NIPAL1Q6NVV3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.47■□□□□ 0.71
NIPAL1Q6NVV3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.47■□□□□ 0.71
NIPAL1Q6NVV3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NIPAL1Q6NVV3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NIPAL1Q6NVV3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NIPAL1Q6NVV3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NIPAL1Q6NVV3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NIPAL1Q6NVV3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NIPAL1Q6NVV3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NIPAL1Q6NVV3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NIPAL1Q6NVV3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.47■□□□□ 0.71
NIPAL1Q6NVV3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.47■□□□□ 0.71
NIPAL1Q6NVV3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NIPAL1Q6NVV3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NIPAL1Q6NVV3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NIPAL1Q6NVV3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NIPAL1Q6NVV3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.46■□□□□ 0.71
NIPAL1Q6NVV3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.46■□□□□ 0.71
NIPAL1Q6NVV3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NIPAL1Q6NVV3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NIPAL1Q6NVV3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NIPAL1Q6NVV3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.46■□□□□ 0.71
NIPAL1Q6NVV3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NIPAL1Q6NVV3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.46■□□□□ 0.71
NIPAL1Q6NVV3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NIPAL1Q6NVV3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
NIPAL1Q6NVV3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
NIPAL1Q6NVV3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NIPAL1Q6NVV3 MKRN4P-201ENST00000444706 1521 ntBASIC19.46■□□□□ 0.71
NIPAL1Q6NVV3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
NIPAL1Q6NVV3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
NIPAL1Q6NVV3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.45■□□□□ 0.7
NIPAL1Q6NVV3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NIPAL1Q6NVV3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NIPAL1Q6NVV3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NIPAL1Q6NVV3 AC010980.2-201ENST00000587099 1412 ntBASIC19.45■□□□□ 0.7
NIPAL1Q6NVV3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.45■□□□□ 0.7
NIPAL1Q6NVV3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.45■□□□□ 0.7
NIPAL1Q6NVV3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.45■□□□□ 0.7
NIPAL1Q6NVV3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NIPAL1Q6NVV3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.45■□□□□ 0.7
NIPAL1Q6NVV3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.45■□□□□ 0.7
NIPAL1Q6NVV3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NIPAL1Q6NVV3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NIPAL1Q6NVV3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
NIPAL1Q6NVV3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
NIPAL1Q6NVV3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NIPAL1Q6NVV3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NIPAL1Q6NVV3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NIPAL1Q6NVV3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NIPAL1Q6NVV3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NIPAL1Q6NVV3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.44■□□□□ 0.7
NIPAL1Q6NVV3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPAL1Q6NVV3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPAL1Q6NVV3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPAL1Q6NVV3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPAL1Q6NVV3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.44■□□□□ 0.7
NIPAL1Q6NVV3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NIPAL1Q6NVV3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NIPAL1Q6NVV3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.44■□□□□ 0.7
NIPAL1Q6NVV3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPAL1Q6NVV3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.44■□□□□ 0.7
NIPAL1Q6NVV3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.44■□□□□ 0.7
NIPAL1Q6NVV3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.44■□□□□ 0.7
NIPAL1Q6NVV3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NIPAL1Q6NVV3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.44■□□□□ 0.7
NIPAL1Q6NVV3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.44■□□□□ 0.7
NIPAL1Q6NVV3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.44■□□□□ 0.7
NIPAL1Q6NVV3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NIPAL1Q6NVV3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPAL1Q6NVV3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.44■□□□□ 0.7
NIPAL1Q6NVV3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NIPAL1Q6NVV3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPAL1Q6NVV3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NIPAL1Q6NVV3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NIPAL1Q6NVV3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NIPAL1Q6NVV3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.43■□□□□ 0.7
NIPAL1Q6NVV3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NIPAL1Q6NVV3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NIPAL1Q6NVV3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NIPAL1Q6NVV3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.43■□□□□ 0.7
NIPAL1Q6NVV3 ID1-201ENST00000376105 1233 ntBASIC19.43■□□□□ 0.7
NIPAL1Q6NVV3 TSPY6P-201ENST00000448518 926 ntBASIC19.43■□□□□ 0.7
NIPAL1Q6NVV3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms