Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 APL4YPR029C 2499 nt3.24□□□□□ -1.89
TY1A-MR1Q04215 YHR032C-AYHR032C-A 120 nt3.24□□□□□ -1.89
TY1A-MR1Q04215 tV(CAC)DtV(CAC)D 73 nt3.24□□□□□ -1.89
TY1A-MR1Q04215 tV(CAC)HtV(CAC)H 73 nt3.24□□□□□ -1.89
TY1A-MR1Q04215 PHD1YKL043W 1101 nt3.24□□□□□ -1.89
TY1A-MR1Q04215 YLR146W-AYLR146W-A 189 nt3.24□□□□□ -1.89
TY1A-MR1Q04215 ERB1YMR049C 2424 nt3.24□□□□□ -1.89
TY1A-MR1Q04215 PSK2YOL045W 3306 nt3.24□□□□□ -1.89
TY1A-MR1Q04215 GIS1YDR096W 2685 nt3.24□□□□□ -1.89
TY1A-MR1Q04215 STU1YBL034C 4542 nt3.23□□□□□ -1.89
TY1A-MR1Q04215 TRS120YDR407C 3870 nt3.23□□□□□ -1.89
TY1A-MR1Q04215 SEC15YGL233W 2733 nt3.23□□□□□ -1.89
TY1A-MR1Q04215 MPH1YIR002C 2982 nt3.23□□□□□ -1.89
TY1A-MR1Q04215 PHM6YDR281C 315 nt3.23□□□□□ -1.89
TY1A-MR1Q04215 HEF3YNL014W 3135 nt3.23□□□□□ -1.89
TY1A-MR1Q04215 FAR1YJL157C 2493 nt3.22□□□□□ -1.89
TY1A-MR1Q04215 YDL025W-AYDL025W-A 105 nt3.22□□□□□ -1.89
TY1A-MR1Q04215 RPL31AYDL075W 342 nt3.22□□□□□ -1.89
TY1A-MR1Q04215 SSM4YIL030C 3960 nt3.22□□□□□ -1.89
TY1A-MR1Q04215 FLO10YKR102W 3510 nt3.22□□□□□ -1.89
TY1A-MR1Q04215 MET10YFR030W 3108 nt3.22□□□□□ -1.89
TY1A-MR1Q04215 URA2YJL130C 6645 nt3.21□□□□□ -1.9
TY1A-MR1Q04215 SPC98YNL126W 2541 nt3.21□□□□□ -1.9
TY1A-MR1Q04215 NIP100YPL174C 2607 nt3.21□□□□□ -1.9
TY1A-MR1Q04215 YBL012CYBL012C 402 nt3.21□□□□□ -1.9
TY1A-MR1Q04215 YPR022CYPR022C 3402 nt3.21□□□□□ -1.9
TY1A-MR1Q04215 RPO21YDL140C 5202 nt3.21□□□□□ -1.9
TY1A-MR1Q04215 YDR034C-DYDR034C-D 5313 nt3.21□□□□□ -1.9
TY1A-MR1Q04215 MSC6YOR354C 2079 nt3.21□□□□□ -1.9
TY1A-MR1Q04215 AIM44YPL158C 2277 nt3.21□□□□□ -1.9
TY1A-MR1Q04215 PBY1YBR094W 2262 nt3.21□□□□□ -1.9
TY1A-MR1Q04215 TOP1YOL006C 2310 nt3.2□□□□□ -1.9
TY1A-MR1Q04215 ITC1YGL133W 3795 nt3.2□□□□□ -1.9
TY1A-MR1Q04215 TMA17YDL110C 453 nt3.2□□□□□ -1.9
TY1A-MR1Q04215 YDR371C-AYDR371C-A 105 nt3.2□□□□□ -1.9
TY1A-MR1Q04215 SPT4YGR063C 309 nt3.2□□□□□ -1.9
TY1A-MR1Q04215 snR43snR43 209 nt3.2□□□□□ -1.9
TY1A-MR1Q04215 MTR4YJL050W 3222 nt3.2□□□□□ -1.9
TY1A-MR1Q04215 MYO3YKL129C 3819 nt3.2□□□□□ -1.9
TY1A-MR1Q04215 TMA108YIL137C 2841 nt3.2□□□□□ -1.9
TY1A-MR1Q04215 SYT1YPR095C 3681 nt3.2□□□□□ -1.9
TY1A-MR1Q04215 KAP95YLR347C 2586 nt3.19□□□□□ -1.9
TY1A-MR1Q04215 ARO80YDR421W 2853 nt3.19□□□□□ -1.9
TY1A-MR1Q04215 YHR032W-AYHR032W-A 180 nt3.19□□□□□ -1.9
TY1A-MR1Q04215 RPL42BYHR141C 321 nt3.19□□□□□ -1.9
TY1A-MR1Q04215 JEN1YKL217W 1851 nt3.19□□□□□ -1.9
TY1A-MR1Q04215 YIL080WYIL080W 4722 nt3.19□□□□□ -1.9
TY1A-MR1Q04215 SEF1YBL066C 3447 nt3.19□□□□□ -1.9
TY1A-MR1Q04215 FAS1YKL182W 6156 nt3.18□□□□□ -1.9
TY1A-MR1Q04215 VPS35YJL154C 2835 nt3.18□□□□□ -1.9
TY1A-MR1Q04215 ZDS2YML109W 2829 nt3.18□□□□□ -1.9
TY1A-MR1Q04215 PAU3YCR104W 375 nt3.18□□□□□ -1.9
TY1A-MR1Q04215 YJL120WYJL120W 324 nt3.18□□□□□ -1.9
TY1A-MR1Q04215 RPS25BYLR333C 327 nt3.18□□□□□ -1.9
TY1A-MR1Q04215 YPR108W-AYPR108W-A 213 nt3.18□□□□□ -1.9
TY1A-MR1Q04215 SWI6YLR182W 2412 nt3.18□□□□□ -1.9
TY1A-MR1Q04215 RDS1YCR106W 2499 nt3.17□□□□□ -1.9
TY1A-MR1Q04215 YKL162C-AYKL162C-A 153 nt3.17□□□□□ -1.9
TY1A-MR1Q04215 MDV1YJL112W 2145 nt3.17□□□□□ -1.9
TY1A-MR1Q04215 SAK1YER129W 3429 nt3.17□□□□□ -1.9
TY1A-MR1Q04215 SRP14YDL092W 441 nt3.16□□□□□ -1.9
TY1A-MR1Q04215 RPS8AYBL072C 603 nt3.16□□□□□ -1.9
TY1A-MR1Q04215 AI2Q0055 2565 nt3.16□□□□□ -1.9
TY1A-MR1Q04215 VBA4YDR119W 2307 nt3.16□□□□□ -1.9
TY1A-MR1Q04215 SMC3YJL074C 3693 nt3.16□□□□□ -1.9
TY1A-MR1Q04215 CHS3YBR023C 3498 nt3.16□□□□□ -1.9
TY1A-MR1Q04215 RPN2YIL075C 2838 nt3.15□□□□□ -1.9
TY1A-MR1Q04215 YCR043CYCR043C 384 nt3.15□□□□□ -1.91
TY1A-MR1Q04215 FAP7YDL166C 594 nt3.15□□□□□ -1.91
TY1A-MR1Q04215 FMP16YDR070C 282 nt3.15□□□□□ -1.91
TY1A-MR1Q04215 YDR464C-AYDR464C-A 189 nt3.15□□□□□ -1.91
TY1A-MR1Q04215 RPL23BYER117W 414 nt3.15□□□□□ -1.91
TY1A-MR1Q04215 SQS1YNL224C 2304 nt3.14□□□□□ -1.91
TY1A-MR1Q04215 snR81snR81 201 nt3.14□□□□□ -1.91
TY1A-MR1Q04215 MDN1YLR106C 14733 nt3.13□□□□□ -1.91
TY1A-MR1Q04215 YIL134C-AYIL134C-A 204 nt3.13□□□□□ -1.91
TY1A-MR1Q04215 RPS12YOR369C 432 nt3.13□□□□□ -1.91
TY1A-MR1Q04215 ZIP1YDR285W 2628 nt3.13□□□□□ -1.91
TY1A-MR1Q04215 ZIP2YGL249W 2115 nt3.13□□□□□ -1.91
TY1A-MR1Q04215 FRE2YKL220C 2136 nt3.13□□□□□ -1.91
TY1A-MR1Q04215 RCY1YJL204C 2523 nt3.13□□□□□ -1.91
TY1A-MR1Q04215 ORC1YML065W 2745 nt3.13□□□□□ -1.91
TY1A-MR1Q04215 BOI1YBL085W 2943 nt3.13□□□□□ -1.91
TY1A-MR1Q04215 YDR210W-BYDR210W-B 5313 nt3.12□□□□□ -1.91
TY1A-MR1Q04215 YDR261W-BYDR261W-B 5313 nt3.12□□□□□ -1.91
TY1A-MR1Q04215 YFL002W-AYFL002W-A 5313 nt3.12□□□□□ -1.91
TY1A-MR1Q04215 YGR161W-BYGR161W-B 5313 nt3.12□□□□□ -1.91
TY1A-MR1Q04215 YLR410W-BYLR410W-B 5313 nt3.12□□□□□ -1.91
TY1A-MR1Q04215 YCL019WYCL019W 5313 nt3.12□□□□□ -1.91
TY1A-MR1Q04215 RFX1YLR176C 2436 nt3.12□□□□□ -1.91
TY1A-MR1Q04215 PHO81YGR233C 3537 nt3.12□□□□□ -1.91
TY1A-MR1Q04215 RCO1YMR075W 2055 nt3.12□□□□□ -1.91
TY1A-MR1Q04215 YFL065CYFL065C 309 nt3.12□□□□□ -1.91
TY1A-MR1Q04215 EDS1YBR033W 2760 nt3.12□□□□□ -1.91
TY1A-MR1Q04215 RPH1YER169W 2391 nt3.12□□□□□ -1.91
TY1A-MR1Q04215 SLY1YDR189W 2001 nt3.12□□□□□ -1.91
TY1A-MR1Q04215 PKH1YDR490C 2301 nt3.11□□□□□ -1.91
TY1A-MR1Q04215 SMY2YBR172C 2223 nt3.11□□□□□ -1.91
TY1A-MR1Q04215 SLX4YLR135W 2247 nt3.11□□□□□ -1.91
TY1A-MR1Q04215 MNE1YOR350C 1992 nt3.11□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 58.9 ms