Protein–RNA interactions for Protein: P53540

SPC98, Spindle pole body component SPC98, yeastyeast

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPC98P53540 DBP6YNR038W 1890 nt2.57□□□□□ -2
SPC98P53540 YFH1YDL120W 525 nt2.57□□□□□ -2
SPC98P53540 YGL024WYGL024W 336 nt2.57□□□□□ -2
SPC98P53540 RPL36AYMR194W 303 nt2.57□□□□□ -2
SPC98P53540 LSM7YNL147W 348 nt2.57□□□□□ -2
SPC98P53540 LCL1YPL056C 306 nt2.57□□□□□ -2
SPC98P53540 snR49snR49 165 nt2.57□□□□□ -2
SPC98P53540 SRB8YCR081W 4284 nt2.57□□□□□ -2
SPC98P53540 SCP160YJL080C 3669 nt2.57□□□□□ -2
SPC98P53540 MPH1YIR002C 2982 nt2.57□□□□□ -2
SPC98P53540 NUM1YDR150W 8247 nt2.57□□□□□ -2
SPC98P53540 FIR1YER032W 2631 nt2.56□□□□□ -2
SPC98P53540 YIL156W-BYIL156W-B 222 nt2.56□□□□□ -2
SPC98P53540 SDH2YLL041C 801 nt2.56□□□□□ -2
SPC98P53540 ABF2YMR072W 552 nt2.56□□□□□ -2
SPC98P53540 FPR1YNL135C 345 nt2.56□□□□□ -2
SPC98P53540 RTT10YPL183C 3042 nt2.56□□□□□ -2
SPC98P53540 GCV2YMR189W 3105 nt2.56□□□□□ -2
SPC98P53540 RAD61YDR014W 1944 nt2.56□□□□□ -2
SPC98P53540 YCK3YER123W 1575 nt2.55□□□□□ -2
SPC98P53540 KSP1YHR082C 3090 nt2.55□□□□□ -2
SPC98P53540 APQ12YIL040W 417 nt2.55□□□□□ -2
SPC98P53540 GRX8YLR364W 330 nt2.55□□□□□ -2
SPC98P53540 YNL198CYNL198C 303 nt2.55□□□□□ -2
SPC98P53540 YOR008C-AYOR008C-A 225 nt2.55□□□□□ -2
SPC98P53540 RTC6YPL183W-A 282 nt2.55□□□□□ -2
SPC98P53540 YBL005W-BYBL005W-B 5268 nt2.55□□□□□ -2
SPC98P53540 PDR11YIL013C 4236 nt2.54□□□□□ -2
SPC98P53540 YGL014C-AYGL014C-A 162 nt2.54□□□□□ -2
SPC98P53540 YGL041CYGL041C 204 nt2.54□□□□□ -2
SPC98P53540 YAL042C-AYAL042C-A 378 nt2.54□□□□□ -2
SPC98P53540 YNL010WYNL010W 726 nt2.54□□□□□ -2
SPC98P53540 TMN3YER113C 2121 nt2.54□□□□□ -2
SPC98P53540 CAF120YNL278W 3183 nt2.54□□□□□ -2
SPC98P53540 YPR089WYPR089W 2667 nt2.54□□□□□ -2
SPC98P53540 HCS1YKL017C 2052 nt2.53□□□□□ -2
SPC98P53540 PHS1YJL097W 654 nt2.53□□□□□ -2
SPC98P53540 YOR055WYOR055W 435 nt2.53□□□□□ -2
SPC98P53540 COG8YML071C 1824 nt2.53□□□□□ -2
SPC98P53540 PHO91YNR013C 2685 nt2.52□□□□□ -2.01
SPC98P53540 STE11YLR362W 2154 nt2.52□□□□□ -2.01
SPC98P53540 YDL025W-AYDL025W-A 105 nt2.52□□□□□ -2.01
SPC98P53540 YGL069CYGL069C 465 nt2.52□□□□□ -2.01
SPC98P53540 SAR1YPL218W 573 nt2.52□□□□□ -2.01
SPC98P53540 ESL2YKR096W 3588 nt2.52□□□□□ -2.01
SPC98P53540 APL5YPL195W 2799 nt2.52□□□□□ -2.01
SPC98P53540 UTP14YML093W 2700 nt2.51□□□□□ -2.01
SPC98P53540 YDR209CYDR209C 414 nt2.51□□□□□ -2.01
SPC98P53540 VTC1YER072W 390 nt2.51□□□□□ -2.01
SPC98P53540 YHL042WYHL042W 453 nt2.51□□□□□ -2.01
SPC98P53540 YIL032CYIL032C 357 nt2.51□□□□□ -2.01
SPC98P53540 YLR053CYLR053C 327 nt2.51□□□□□ -2.01
SPC98P53540 MRPL33YMR286W 261 nt2.51□□□□□ -2.01
SPC98P53540 YBR064WYBR064W 429 nt2.51□□□□□ -2.01
SPC98P53540 VPS35YJL154C 2835 nt2.51□□□□□ -2.01
SPC98P53540 ESC1YMR219W 4977 nt2.51□□□□□ -2.01
SPC98P53540 SWR1YDR334W 4545 nt2.51□□□□□ -2.01
SPC98P53540 MSB1YOR188W 3414 nt2.51□□□□□ -2.01
SPC98P53540 RIM20YOR275C 1986 nt2.5□□□□□ -2.01
SPC98P53540 NCL1YBL024W 2055 nt2.5□□□□□ -2.01
SPC98P53540 RBK1YCR036W 1002 nt2.5□□□□□ -2.01
SPC98P53540 YHL041WYHL041W 450 nt2.5□□□□□ -2.01
SPC98P53540 PAM16YJL104W 450 nt2.5□□□□□ -2.01
SPC98P53540 RPS27AYKL156W 249 nt2.5□□□□□ -2.01
SPC98P53540 RPL38YLR325C 237 nt2.5□□□□□ -2.01
SPC98P53540 YOL155W-AYOL155W-A 135 nt2.5□□□□□ -2.01
SPC98P53540 RGA2YDR379W 3030 nt2.5□□□□□ -2.01
SPC98P53540 SRO77YBL106C 3033 nt2.5□□□□□ -2.01
SPC98P53540 SGD1YLR336C 2700 nt2.49□□□□□ -2.01
SPC98P53540 PRP6YBR055C 2700 nt2.49□□□□□ -2.01
SPC98P53540 UBP11YKR098C 2154 nt2.49□□□□□ -2.01
SPC98P53540 NFT1YKR103W 3657 nt2.49□□□□□ -2.01
SPC98P53540 YIL059CYIL059C 366 nt2.49□□□□□ -2.01
SPC98P53540 YLR154W-EYLR154W-E 204 nt2.49□□□□□ -2.01
SPC98P53540 HHT1YBR010W 411 nt2.49□□□□□ -2.01
SPC98P53540 YCL023CYCL023C 348 nt2.49□□□□□ -2.01
SPC98P53540 DOT6YER088C 2013 nt2.49□□□□□ -2.01
SPC98P53540 PTC5YOR090C 1719 nt2.48□□□□□ -2.01
SPC98P53540 YPR063CYPR063C 423 nt2.48□□□□□ -2.01
SPC98P53540 HRD3YLR207W 2502 nt2.48□□□□□ -2.01
SPC98P53540 PAN3YKL025C 2040 nt2.47□□□□□ -2.01
SPC98P53540 ARP8YOR141C 2646 nt2.47□□□□□ -2.01
SPC98P53540 PRE4YFR050C 801 nt2.47□□□□□ -2.01
SPC98P53540 SMD1YGR074W 441 nt2.47□□□□□ -2.01
SPC98P53540 YMR307C-AYMR307C-A 195 nt2.47□□□□□ -2.01
SPC98P53540 SDC25YLL016W 3147 nt2.46□□□□□ -2.01
SPC98P53540 SMC6YLR383W 3345 nt2.46□□□□□ -2.02
SPC98P53540 NPC2YDL046W 522 nt2.46□□□□□ -2.02
SPC98P53540 YMR172C-AYMR172C-A 384 nt2.46□□□□□ -2.02
SPC98P53540 CRS5YOR031W 210 nt2.46□□□□□ -2.02
SPC98P53540 TRA1YHR099W 11235 nt2.46□□□□□ -2.02
SPC98P53540 SNU114YKL173W 3027 nt2.46□□□□□ -2.02
SPC98P53540 DFG16YOR030W 1860 nt2.45□□□□□ -2.02
SPC98P53540 NUP170YBL079W 4509 nt2.45□□□□□ -2.02
SPC98P53540 TOF2YKR010C 2316 nt2.45□□□□□ -2.02
SPC98P53540 GUP1YGL084C 1683 nt2.45□□□□□ -2.02
SPC98P53540 YJL182CYJL182C 318 nt2.45□□□□□ -2.02
SPC98P53540 IES4YOR189W 351 nt2.45□□□□□ -2.02
SPC98P53540 MDM20YOL076W 2391 nt2.45□□□□□ -2.02
SPC98P53540 NPR2YEL062W 1848 nt2.45□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 31.2 ms