Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CDH20Q9HBT6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH20Q9HBT6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH20Q9HBT6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDH20Q9HBT6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.73■□□□□ 0.43
CDH20Q9HBT6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.73■□□□□ 0.43
CDH20Q9HBT6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CDH20Q9HBT6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH20Q9HBT6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDH20Q9HBT6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 AL109923.1-201ENST00000618799 583 ntBASIC17.72■□□□□ 0.43
CDH20Q9HBT6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 AC087633.2-202ENST00000565166 1439 ntBASIC17.72■□□□□ 0.43
CDH20Q9HBT6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
CDH20Q9HBT6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH20Q9HBT6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH20Q9HBT6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH20Q9HBT6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH20Q9HBT6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH20Q9HBT6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH20Q9HBT6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH20Q9HBT6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CDH20Q9HBT6 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.71■□□□□ 0.43
CDH20Q9HBT6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH20Q9HBT6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CDH20Q9HBT6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH20Q9HBT6 CYP2T3P-201ENST00000601990 817 ntBASIC17.71■□□□□ 0.43
CDH20Q9HBT6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CDH20Q9HBT6 MIR2861-201ENST00000636310 90 ntBASIC17.71■□□□□ 0.43
CDH20Q9HBT6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH20Q9HBT6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH20Q9HBT6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH20Q9HBT6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH20Q9HBT6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH20Q9HBT6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH20Q9HBT6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CDH20Q9HBT6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.71■□□□□ 0.42
CDH20Q9HBT6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH20Q9HBT6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH20Q9HBT6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CDH20Q9HBT6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH20Q9HBT6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH20Q9HBT6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CDH20Q9HBT6 AC138932.1-201ENST00000534164 6830 ntBASIC17.7■□□□□ 0.42
CDH20Q9HBT6 FP700111.2-201ENST00000619190 1892 ntBASIC17.7■□□□□ 0.42
CDH20Q9HBT6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH20Q9HBT6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH20Q9HBT6 KRT18P68-201ENST00000392293 1000 ntBASIC17.7■□□□□ 0.42
CDH20Q9HBT6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH20Q9HBT6 LSM12P1-201ENST00000411836 588 ntBASIC17.7■□□□□ 0.42
CDH20Q9HBT6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDH20Q9HBT6 AL355472.2-201ENST00000422958 438 ntBASIC17.7■□□□□ 0.42
CDH20Q9HBT6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH20Q9HBT6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDH20Q9HBT6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH20Q9HBT6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.7■□□□□ 0.42
CDH20Q9HBT6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH20Q9HBT6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH20Q9HBT6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH20Q9HBT6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH20Q9HBT6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDH20Q9HBT6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 521.2 ms