RNA–Protein interactions for RNA: ENST00000411836.1

LSM12P1-201, Transcript of LSM12 pseudogene 1, humanhuman

BASIC

Gene LSM12P1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12P1-201ENST00000411836 NISCHQ9Y2I1 1504 aa49.38■■■■■ 5.5
LSM12P1-201ENST00000411836 CCDC180Q9P1Z9 1646 aa43.87■■■■■ 4.61
LSM12P1-201ENST00000411836 ABCC9O60706 1549 aa43.11■■■■■ 4.49
LSM12P1-201ENST00000411836 DCAF8L2P0C7V8 631 aa41.55■■■■■ 4.24
LSM12P1-201ENST00000411836 RB1CC1Q8TDY2 1594 aa41.4■■■■■ 4.22
LSM12P1-201ENST00000411836 NACADO15069 1562 aa41.31■■■■■ 4.2
LSM12P1-201ENST00000411836 ZCCHC6Q5VYS8 1495 aaKnown RBP41.09■■■■■ 4.17
LSM12P1-201ENST00000411836 MYO15BQ96JP2 1530 aa40.98■■■■■ 4.15
LSM12P1-201ENST00000411836 DCAF1Q9Y4B6 1507 aa40.8■■■■■ 4.12
LSM12P1-201ENST00000411836 PABPN1Q86U42 306 aaKnown RBP eCLIP40.33■■■■■ 4.05
LSM12P1-201ENST00000411836 UNC13AQ9UPW8 1703 aa40.33■■■■■ 4.05
LSM12P1-201ENST00000411836 SCRIBQ14160 1630 aa40.11■■■■■ 4.01
LSM12P1-201ENST00000411836 BICRAQ9NZM4 1560 aa40.05■■■■■ 4
LSM12P1-201ENST00000411836 SHROOM4Q9ULL8 1493 aa39.65■■■■□ 3.94
LSM12P1-201ENST00000411836 DNAJC5BQ9UF47 199 aa39.58■■■■□ 3.93
LSM12P1-201ENST00000411836 EIF4G1Q04637 1599 aaKnown RBP39.06■■■■□ 3.84
LSM12P1-201ENST00000411836 CC2D2AQ9P2K1 1620 aa38.92■■■■□ 3.82
LSM12P1-201ENST00000411836 CECR2Q9BXF3 1484 aa38.73■■■■□ 3.79
LSM12P1-201ENST00000411836 SMARCA4P51532 1647 aa38.3■■■■□ 3.72
LSM12P1-201ENST00000411836 BAZ1AQ9NRL2 1556 aaPredicted RBP38.29■■■■□ 3.72
LSM12P1-201ENST00000411836 ATAD2BQ9ULI0 1458 aa38.14■■■■□ 3.7
LSM12P1-201ENST00000411836 NCAPD3P42695 1498 aa38.12■■■■□ 3.69
LSM12P1-201ENST00000411836 SMARCA2P51531 1590 aa38.11■■■■□ 3.69
LSM12P1-201ENST00000411836 MROH2BQ7Z745 1585 aa38.06■■■■□ 3.68
LSM12P1-201ENST00000411836 HMGXB3Q12766 1538 aa37.9■■■■□ 3.66
LSM12P1-201ENST00000411836 BAZ1BQ9UIG0 1483 aaKnown RBP37.88■■■■□ 3.65
LSM12P1-201ENST00000411836 PEG3Q9GZU2 1588 aa37.88■■■■□ 3.65
LSM12P1-201ENST00000411836 WIZO95785 1651 aa37.64■■■■□ 3.62
LSM12P1-201ENST00000411836 RSF1Q96T23 1441 aaPredicted RBP37.62■■■■□ 3.61
LSM12P1-201ENST00000411836 TOP2AP11388 1531 aaKnown RBP37.24■■■■□ 3.55
LSM12P1-201ENST00000411836 NESP48681 1621 aa37.24■■■■□ 3.55
LSM12P1-201ENST00000411836 ERCC6Q03468 1493 aa37.21■■■■□ 3.55
LSM12P1-201ENST00000411836 LAMC3Q9Y6N6 1575 aa37.12■■■■□ 3.53
LSM12P1-201ENST00000411836 CADPSQ9ULU8 1353 aa37.06■■■■□ 3.52
LSM12P1-201ENST00000411836 PDS5BQ9NTI5 1447 aa36.96■■■■□ 3.51
LSM12P1-201ENST00000411836 CCDC88BA6NC98 1476 aa36.83■■■■□ 3.49
LSM12P1-201ENST00000411836 SUPT5HO00267 1087 aaKnown RBP36.82■■■■□ 3.48
LSM12P1-201ENST00000411836 CFTRP13569 1480 aa36.78■■■■□ 3.48
LSM12P1-201ENST00000411836 KIF21AQ7Z4S6 1674 aa36.74■■■■□ 3.47
LSM12P1-201ENST00000411836 CUX2O14529 1486 aa36.74■■■■□ 3.47
LSM12P1-201ENST00000411836 FANCD2Q9BXW9 1451 aa36.63■■■■□ 3.45
LSM12P1-201ENST00000411836 THOC2Q8NI27 1593 aaKnown RBP36.61■■■■□ 3.45
LSM12P1-201ENST00000411836 CEP164Q9UPV0 1460 aa36.6■■■■□ 3.45
LSM12P1-201ENST00000411836 MRC2Q9UBG0 1479 aa36.54■■■■□ 3.44
LSM12P1-201ENST00000411836 PRDM2Q13029 1718 aa36.42■■■■□ 3.42
LSM12P1-201ENST00000411836 WDR62O43379 1518 aa36.36■■■■□ 3.41
LSM12P1-201ENST00000411836 URB2Q14146 1524 aaKnown RBP36.22■■■■□ 3.39
LSM12P1-201ENST00000411836 ABCC8Q09428 1581 aa36.05■■■■□ 3.36
LSM12P1-201ENST00000411836 TOPBP1Q92547 1522 aa36.01■■■■□ 3.36
LSM12P1-201ENST00000411836 DNMBPQ6XZF7 1577 aa35.95■■■■□ 3.35
LSM12P1-201ENST00000411836 IFT140Q96RY7 1462 aa35.82■■■■□ 3.32
LSM12P1-201ENST00000411836 DNAJC5Q9H3Z4 198 aa35.73■■■■□ 3.31
LSM12P1-201ENST00000411836 CUX1P39880 1505 aa35.7■■■■□ 3.31
LSM12P1-201ENST00000411836 POLA1P09884 1462 aaPredicted RBP35.69■■■■□ 3.3
LSM12P1-201ENST00000411836 ZNF608Q9ULD9 1512 aaPredicted RBP35.64■■■■□ 3.3
LSM12P1-201ENST00000411836 FGD5Q6ZNL6 1462 aa35.63■■■■□ 3.29
LSM12P1-201ENST00000411836 SOGA1O94964 1423 aa35.63■■■■□ 3.29
LSM12P1-201ENST00000411836 RAD54L2Q9Y4B4 1467 aa35.58■■■■□ 3.29
LSM12P1-201ENST00000411836 TARBP1Q13395 1621 aaKnown RBP35.56■■■■□ 3.28
LSM12P1-201ENST00000411836 WRNQ14191 1432 aaPredicted RBP eCLIP35.52■■■■□ 3.28
LSM12P1-201ENST00000411836 AQRO60306 1485 aaKnown RBP eCLIP35.48■■■■□ 3.27
LSM12P1-201ENST00000411836 EIF4G3O43432 1585 aaKnown RBP35.47■■■■□ 3.27
LSM12P1-201ENST00000411836 TDRD9Q8NDG6 1382 aaKnown RBP35.43■■■■□ 3.26
LSM12P1-201ENST00000411836 TOP2BQ02880 1626 aa35.37■■■■□ 3.25
LSM12P1-201ENST00000411836 SYNJ1O43426 1573 aa35.35■■■■□ 3.25
LSM12P1-201ENST00000411836 BIVM-ERCC5R4GMW8 1640 aa35.34■■■■□ 3.25
LSM12P1-201ENST00000411836 OSCARQ8IYS5 282 aa35.33■■■■□ 3.25
LSM12P1-201ENST00000411836 WDR97A6NE52 1622 aa35.29■■■■□ 3.24
LSM12P1-201ENST00000411836 ABCA10Q8WWZ4 1543 aa35.25■■■■□ 3.23
LSM12P1-201ENST00000411836 FBLN2P98095 1184 aa35.22■■■■□ 3.23
LSM12P1-201ENST00000411836 GRIN2BQ13224 1484 aa35.18■■■■□ 3.22
LSM12P1-201ENST00000411836 GAPVD1Q14C86 1478 aa35.18■■■■□ 3.22
LSM12P1-201ENST00000411836 SNAPC4Q5SXM2 1469 aa35.14■■■■□ 3.22
LSM12P1-201ENST00000411836 MAGI1Q96QZ7 1491 aaPredicted RBP35.08■■■■□ 3.21
LSM12P1-201ENST00000411836 CHMP7Q8WUX9 453 aaPredicted RBP35.07■■■■□ 3.2
LSM12P1-201ENST00000411836 ABCA5Q8WWZ7 1642 aa35.06■■■■□ 3.2
LSM12P1-201ENST00000411836 PBRM1Q86U86 1689 aa35.03■■■■□ 3.2
LSM12P1-201ENST00000411836 CHD1O14646 1710 aa35.03■■■■□ 3.2
LSM12P1-201ENST00000411836 SYNJ2O15056 1496 aa34.95■■■■□ 3.19
LSM12P1-201ENST00000411836 ERICH3Q5RHP9 1530 aa34.83■■■■□ 3.17
LSM12P1-201ENST00000411836 KIF27Q86VH2 1401 aa34.81■■■■□ 3.16
LSM12P1-201ENST00000411836 FHAD1B1AJZ9 1412 aa34.78■■■■□ 3.16
LSM12P1-201ENST00000411836 TRIM41Q8WV44 630 aa34.77■■■■□ 3.16
LSM12P1-201ENST00000411836 ADAMTS12P58397 1594 aa34.77■■■■□ 3.16
LSM12P1-201ENST00000411836 GRIN2AQ12879 1464 aa34.71■■■■□ 3.15
LSM12P1-201ENST00000411836 ARHGEF11O15085 1522 aa34.64■■■■□ 3.14
LSM12P1-201ENST00000411836 IGF1RP08069 1367 aa34.63■■■■□ 3.13
LSM12P1-201ENST00000411836 RIMBP3CA6NJZ7 1639 aa34.63■■■■□ 3.13
LSM12P1-201ENST00000411836 RIMBP3BA6NNM3 1639 aa34.63■■■■□ 3.13
LSM12P1-201ENST00000411836 RIMBP3Q9UFD9 1639 aa34.63■■■■□ 3.13
LSM12P1-201ENST00000411836 CLASP1Q7Z460 1538 aa34.63■■■■□ 3.13
LSM12P1-201ENST00000411836 NUP160Q12769 1436 aa34.52■■■■□ 3.12
LSM12P1-201ENST00000411836 CUL7Q14999 1698 aa34.5■■■■□ 3.11
LSM12P1-201ENST00000411836 CEP170Q5SW79 1584 aa34.5■■■■□ 3.11
LSM12P1-201ENST00000411836 CARMIL1Q5VZK9 1371 aa34.47■■■■□ 3.11
LSM12P1-201ENST00000411836 CYB5RLQ6IPT4 315 aa34.46■■■■□ 3.11
LSM12P1-201ENST00000411836 RUSC2Q8N2Y8 1516 aa34.41■■■■□ 3.1
LSM12P1-201ENST00000411836 ARAP1Q96P48 1450 aa34.35■■■■□ 3.09
LSM12P1-201ENST00000411836 JPH4Q96JJ6 628 aa34.29■■■■□ 3.08
LSM12P1-201ENST00000411836 RAPGEF2Q9Y4G8 1499 aa34.24■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms