Protein–RNA interactions for Protein: Q07988

YLR040C, Cell wall protein YLR040C, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR040CQ07988 NPR1YNL183C 2373 nt2.94□□□□□ -1.94
YLR040CQ07988 DRS2YAL026C 4068 nt2.94□□□□□ -1.94
YLR040CQ07988 SDH6YDR379C-A 240 nt2.94□□□□□ -1.94
YLR040CQ07988 TIM13YGR181W 318 nt2.94□□□□□ -1.94
YLR040CQ07988 PHS1YJL097W 654 nt2.94□□□□□ -1.94
YLR040CQ07988 YJL150WYJL150W 303 nt2.94□□□□□ -1.94
YLR040CQ07988 YOR302WYOR302W 78 nt2.94□□□□□ -1.94
YLR040CQ07988 snR191snR191 274 nt2.94□□□□□ -1.94
YLR040CQ07988 YBR197CYBR197C 654 nt2.94□□□□□ -1.94
YLR040CQ07988 FLO5YHR211W 3228 nt2.94□□□□□ -1.94
YLR040CQ07988 CHS2YBR038W 2892 nt2.94□□□□□ -1.94
YLR040CQ07988 SHQ1YIL104C 1524 nt2.93□□□□□ -1.94
YLR040CQ07988 SCW11YGL028C 1629 nt2.93□□□□□ -1.94
YLR040CQ07988 MNT3YIL014W 1893 nt2.93□□□□□ -1.94
YLR040CQ07988 YDR193WYDR193W 399 nt2.93□□□□□ -1.94
YLR040CQ07988 YER088C-AYER088C-A 324 nt2.93□□□□□ -1.94
YLR040CQ07988 YAL064W-BYAL064W-B 381 nt2.93□□□□□ -1.94
YLR040CQ07988 YPR146CYPR146C 330 nt2.93□□□□□ -1.94
YLR040CQ07988 MET10YFR030W 3108 nt2.93□□□□□ -1.94
YLR040CQ07988 ROM1YGR070W 3468 nt2.93□□□□□ -1.94
YLR040CQ07988 CDC24YAL041W 2565 nt2.93□□□□□ -1.94
YLR040CQ07988 YMR317WYMR317W 3423 nt2.93□□□□□ -1.94
YLR040CQ07988 GYP7YDL234C 2241 nt2.92□□□□□ -1.94
YLR040CQ07988 BNI4YNL233W 2679 nt2.92□□□□□ -1.94
YLR040CQ07988 TFB1YDR311W 1929 nt2.92□□□□□ -1.94
YLR040CQ07988 YJL181WYJL181W 1836 nt2.92□□□□□ -1.94
YLR040CQ07988 DUF1YOL087C 3351 nt2.92□□□□□ -1.94
YLR040CQ07988 BRO1YPL084W 2535 nt2.92□□□□□ -1.94
YLR040CQ07988 BFA1YJR053W 1725 nt2.91□□□□□ -1.94
YLR040CQ07988 tK(UUU)DtK(UUU)D 73 nt2.91□□□□□ -1.94
YLR040CQ07988 tK(UUU)G1tK(UUU)G1 73 nt2.91□□□□□ -1.94
YLR040CQ07988 tK(UUU)G2tK(UUU)G2 73 nt2.91□□□□□ -1.94
YLR040CQ07988 tK(UUU)KtK(UUU)K 73 nt2.91□□□□□ -1.94
YLR040CQ07988 tK(UUU)LtK(UUU)L 73 nt2.91□□□□□ -1.94
YLR040CQ07988 tK(UUU)OtK(UUU)O 73 nt2.91□□□□□ -1.94
YLR040CQ07988 tK(UUU)PtK(UUU)P 73 nt2.91□□□□□ -1.94
YLR040CQ07988 YLR053CYLR053C 327 nt2.91□□□□□ -1.94
YLR040CQ07988 YMR141W-AYMR141W-A 225 nt2.91□□□□□ -1.94
YLR040CQ07988 YMR194C-AYMR194C-A 225 nt2.91□□□□□ -1.94
YLR040CQ07988 VIK1YPL253C 1944 nt2.91□□□□□ -1.94
YLR040CQ07988 VPS64YDR200C 1815 nt2.91□□□□□ -1.94
YLR040CQ07988 YTA7YGR270W 4140 nt2.91□□□□□ -1.94
YLR040CQ07988 YGL239CYGL239C 315 nt2.9□□□□□ -1.95
YLR040CQ07988 YMR122W-AYMR122W-A 255 nt2.9□□□□□ -1.95
YLR040CQ07988 CHO2YGR157W 2610 nt2.9□□□□□ -1.95
YLR040CQ07988 SOK2YMR016C 2358 nt2.9□□□□□ -1.95
YLR040CQ07988 PRP39YML046W 1890 nt2.9□□□□□ -1.95
YLR040CQ07988 STE6YKL209C 3873 nt2.9□□□□□ -1.95
YLR040CQ07988 YIL166CYIL166C 1629 nt2.9□□□□□ -1.95
YLR040CQ07988 SPO71YDR104C 3738 nt2.89□□□□□ -1.95
YLR040CQ07988 RPS17BYDR447C 411 nt2.89□□□□□ -1.95
YLR040CQ07988 YEL014CYEL014C 306 nt2.89□□□□□ -1.95
YLR040CQ07988 PAU2YEL049W 363 nt2.89□□□□□ -1.95
YLR040CQ07988 COX23YHR116W 456 nt2.89□□□□□ -1.95
YLR040CQ07988 DLS1YJL065C 504 nt2.89□□□□□ -1.95
YLR040CQ07988 YMR172C-AYMR172C-A 384 nt2.89□□□□□ -1.95
YLR040CQ07988 CYB5YNL111C 363 nt2.89□□□□□ -1.95
YLR040CQ07988 TRM7YBR061C 933 nt2.89□□□□□ -1.95
YLR040CQ07988 CHS3YBR023C 3498 nt2.89□□□□□ -1.95
YLR040CQ07988 VPS3YDR495C 3036 nt2.88□□□□□ -1.95
YLR040CQ07988 YJL222W-BYJL222W-B 138 nt2.88□□□□□ -1.95
YLR040CQ07988 LCL2YLR104W 396 nt2.88□□□□□ -1.95
YLR040CQ07988 RPL36AYMR194W 303 nt2.88□□□□□ -1.95
YLR040CQ07988 VAS1YGR094W 3315 nt2.88□□□□□ -1.95
YLR040CQ07988 APC11YDL008W 498 nt2.87□□□□□ -1.95
YLR040CQ07988 YER121WYER121W 345 nt2.87□□□□□ -1.95
YLR040CQ07988 SAR1YPL218W 573 nt2.87□□□□□ -1.95
YLR040CQ07988 TIM12YBR091C 330 nt2.87□□□□□ -1.95
YLR040CQ07988 FLO1YAR050W 4614 nt2.87□□□□□ -1.95
YLR040CQ07988 SPO14YKR031C 5052 nt2.87□□□□□ -1.95
YLR040CQ07988 ECM25YJL201W 1800 nt2.86□□□□□ -1.95
YLR040CQ07988 SKT5YBL061C 2091 nt2.86□□□□□ -1.95
YLR040CQ07988 RCY1YJL204C 2523 nt2.86□□□□□ -1.95
YLR040CQ07988 COG3YER157W 2406 nt2.86□□□□□ -1.95
YLR040CQ07988 TSC11YER093C 4293 nt2.86□□□□□ -1.95
YLR040CQ07988 snR60snR60 104 nt2.86□□□□□ -1.95
YLR040CQ07988 AYR1YIL124W 894 nt2.86□□□□□ -1.95
YLR040CQ07988 YJL135WYJL135W 318 nt2.86□□□□□ -1.95
YLR040CQ07988 EPL1YFL024C 2499 nt2.86□□□□□ -1.95
YLR040CQ07988 DOA4YDR069C 2781 nt2.86□□□□□ -1.95
YLR040CQ07988 YKU70YMR284W 1809 nt2.86□□□□□ -1.95
YLR040CQ07988 NOP4YPL043W 2058 nt2.85□□□□□ -1.95
YLR040CQ07988 BUD4YJR092W 4344 nt2.85□□□□□ -1.95
YLR040CQ07988 YNL010WYNL010W 726 nt2.85□□□□□ -1.95
YLR040CQ07988 YBR121C-AYBR121C-A 159 nt2.85□□□□□ -1.95
YLR040CQ07988 EXO84YBR102C 2262 nt2.85□□□□□ -1.95
YLR040CQ07988 YDR034C-DYDR034C-D 5313 nt2.85□□□□□ -1.95
YLR040CQ07988 YHL041WYHL041W 450 nt2.84□□□□□ -1.95
YLR040CQ07988 COA4YLR218C 453 nt2.84□□□□□ -1.95
YLR040CQ07988 YBL065WYBL065W 345 nt2.84□□□□□ -1.95
YLR040CQ07988 HHT1YBR010W 411 nt2.84□□□□□ -1.95
YLR040CQ07988 YPR063CYPR063C 423 nt2.84□□□□□ -1.95
YLR040CQ07988 SSE1YPL106C 2082 nt2.84□□□□□ -1.95
YLR040CQ07988 PUF6YDR496C 1971 nt2.83□□□□□ -1.96
YLR040CQ07988 VPS55YJR044C 423 nt2.83□□□□□ -1.96
YLR040CQ07988 PHD1YKL043W 1101 nt2.83□□□□□ -1.96
YLR040CQ07988 RPS27AYKL156W 249 nt2.83□□□□□ -1.96
YLR040CQ07988 RPL20BYOR312C 519 nt2.83□□□□□ -1.96
YLR040CQ07988 FRE2YKL220C 2136 nt2.83□□□□□ -1.96
YLR040CQ07988 RIX1YHR197W 2292 nt2.82□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 105 ms