Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 ARK1YNL020C 1917 nt3.43□□□□□ -1.86
PUF3Q07807 CIN1YOR349W 3045 nt3.43□□□□□ -1.86 RIP-Chip
PUF3Q07807 IOC3YFR013W 2364 nt3.43□□□□□ -1.86
PUF3Q07807 AIM11YER093C-A 414 nt3.43□□□□□ -1.86 RIP-Chip
PUF3Q07807 tK(UUU)DtK(UUU)D 73 nt3.43□□□□□ -1.86
PUF3Q07807 tK(UUU)G1tK(UUU)G1 73 nt3.43□□□□□ -1.86
PUF3Q07807 tK(UUU)G2tK(UUU)G2 73 nt3.43□□□□□ -1.86
PUF3Q07807 tK(UUU)KtK(UUU)K 73 nt3.43□□□□□ -1.86
PUF3Q07807 tK(UUU)LtK(UUU)L 73 nt3.43□□□□□ -1.86
PUF3Q07807 tK(UUU)OtK(UUU)O 73 nt3.43□□□□□ -1.86
PUF3Q07807 tK(UUU)PtK(UUU)P 73 nt3.43□□□□□ -1.86
PUF3Q07807 YJL222W-BYJL222W-B 138 nt3.43□□□□□ -1.86
PUF3Q07807 YLL007CYLL007C 1998 nt3.43□□□□□ -1.86
PUF3Q07807 SSE1YPL106C 2082 nt3.42□□□□□ -1.86
PUF3Q07807 MUS81YDR386W 1899 nt3.42□□□□□ -1.86
PUF3Q07807 NPC2YDL046W 522 nt3.42□□□□□ -1.86
PUF3Q07807 YFL065CYFL065C 309 nt3.42□□□□□ -1.86
PUF3Q07807 SMD1YGR074W 441 nt3.42□□□□□ -1.86
PUF3Q07807 RPS27BYHR021C 249 nt3.42□□□□□ -1.86
PUF3Q07807 YNL097C-BYNL097C-B 123 nt3.42□□□□□ -1.86
PUF3Q07807 YPR146CYPR146C 330 nt3.42□□□□□ -1.86
PUF3Q07807 UBP5YER144C 2418 nt3.42□□□□□ -1.86
PUF3Q07807 BMS1YPL217C 3552 nt3.42□□□□□ -1.86
PUF3Q07807 CDH1YGL003C 1701 nt3.41□□□□□ -1.86
PUF3Q07807 MET10YFR030W 3108 nt3.41□□□□□ -1.86
PUF3Q07807 YIL058WYIL058W 285 nt3.41□□□□□ -1.86
PUF3Q07807 YMR326CYMR326C 309 nt3.41□□□□□ -1.86
PUF3Q07807 GCN1YGL195W 8019 nt3.41□□□□□ -1.86
PUF3Q07807 ARO1YDR127W 4767 nt3.4□□□□□ -1.86 RIP-Chip
PUF3Q07807 HDA3YPR179C 1968 nt3.4□□□□□ -1.86
PUF3Q07807 YDL247W-AYDL247W-A 75 nt3.4□□□□□ -1.87
PUF3Q07807 YDR426CYDR426C 378 nt3.4□□□□□ -1.87
PUF3Q07807 YDR544CYDR544C 429 nt3.4□□□□□ -1.87
PUF3Q07807 PFK26YIL107C 2484 nt3.4□□□□□ -1.87
PUF3Q07807 DLS1YJL065C 504 nt3.4□□□□□ -1.87
PUF3Q07807 YOR376WYOR376W 369 nt3.4□□□□□ -1.87
PUF3Q07807 YMR317WYMR317W 3423 nt3.4□□□□□ -1.87
PUF3Q07807 TOF2YKR010C 2316 nt3.39□□□□□ -1.87
PUF3Q07807 KHA1YJL094C 2622 nt3.39□□□□□ -1.87
PUF3Q07807 RPS28BYLR264W 204 nt3.39□□□□□ -1.87
PUF3Q07807 NUT2YPR168W 474 nt3.39□□□□□ -1.87
PUF3Q07807 YHR080CYHR080C 4038 nt3.39□□□□□ -1.87
PUF3Q07807 YJL181WYJL181W 1836 nt3.39□□□□□ -1.87 RIP-Chip
PUF3Q07807 TCP1YDR212W 1680 nt3.39□□□□□ -1.87
PUF3Q07807 VBA4YDR119W 2307 nt3.38□□□□□ -1.87
PUF3Q07807 PUF6YDR496C 1971 nt3.38□□□□□ -1.87
PUF3Q07807 YNL034WYNL034W 1839 nt3.38□□□□□ -1.87
PUF3Q07807 YER039C-AYER039C-A 219 nt3.38□□□□□ -1.87
PUF3Q07807 URB2YJR041C 3525 nt3.38□□□□□ -1.87
PUF3Q07807 MDM20YOL076W 2391 nt3.38□□□□□ -1.87
PUF3Q07807 YGR027W-BYGR027W-B 5268 nt3.37□□□□□ -1.87
PUF3Q07807 YLR227W-BYLR227W-B 5268 nt3.37□□□□□ -1.87
PUF3Q07807 YPR158C-DYPR158C-D 5268 nt3.37□□□□□ -1.87
PUF3Q07807 TFB1YDR311W 1929 nt3.37□□□□□ -1.87
PUF3Q07807 CHO2YGR157W 2610 nt3.37□□□□□ -1.87
PUF3Q07807 YDL242WYDL242W 354 nt3.37□□□□□ -1.87
PUF3Q07807 RPS7AYOR096W 573 nt3.37□□□□□ -1.87
PUF3Q07807 YBR182C-AYBR182C-A 195 nt3.37□□□□□ -1.87
PUF3Q07807 DRS2YAL026C 4068 nt3.37□□□□□ -1.87
PUF3Q07807 YAK1YJL141C 2424 nt3.36□□□□□ -1.87
PUF3Q07807 PHO81YGR233C 3537 nt3.36□□□□□ -1.87
PUF3Q07807 RSM19YNR037C 276 nt3.36□□□□□ -1.87 RIP-Chip
PUF3Q07807 PRP42YDR235W 1635 nt3.36□□□□□ -1.87
PUF3Q07807 VTC4YJL012C 2166 nt3.35□□□□□ -1.87
PUF3Q07807 NMA111YNL123W 2994 nt3.35□□□□□ -1.87
PUF3Q07807 PDE2YOR360C 1581 nt3.35□□□□□ -1.87
PUF3Q07807 SIZ1YDR409W 2715 nt3.35□□□□□ -1.87
PUF3Q07807 TFB5YDR079C-A 219 nt3.35□□□□□ -1.87
PUF3Q07807 YER121WYER121W 345 nt3.35□□□□□ -1.87
PUF3Q07807 YIL071W-AYIL071W-A 477 nt3.35□□□□□ -1.87
PUF3Q07807 APC9YLR102C 798 nt3.35□□□□□ -1.87
PUF3Q07807 UPS1YLR193C 528 nt3.35□□□□□ -1.87 RIP-Chip
PUF3Q07807 MRPL33YMR286W 261 nt3.35□□□□□ -1.87 RIP-Chip
PUF3Q07807 YOR161W-BYOR161W-B 261 nt3.35□□□□□ -1.87
PUF3Q07807 RPS23BYPR132W 438 nt3.35□□□□□ -1.87
PUF3Q07807 PEX8YGR077C 1770 nt3.35□□□□□ -1.87
PUF3Q07807 LCD1YDR499W 2244 nt3.35□□□□□ -1.87
PUF3Q07807 YSP2YDR326C 4317 nt3.35□□□□□ -1.87
PUF3Q07807 ECM5YMR176W 4236 nt3.34□□□□□ -1.87
PUF3Q07807 SEC5YDR166C 2916 nt3.34□□□□□ -1.87
PUF3Q07807 APC2YLR127C 2562 nt3.34□□□□□ -1.87 RIP-Chip
PUF3Q07807 RBK1YCR036W 1002 nt3.34□□□□□ -1.87
PUF3Q07807 SNU13YEL026W 381 nt3.34□□□□□ -1.87
PUF3Q07807 RPS27AYKL156W 249 nt3.34□□□□□ -1.87
PUF3Q07807 YBR121C-AYBR121C-A 159 nt3.34□□□□□ -1.87
PUF3Q07807 YBR131C-AYBR131C-A 90 nt3.34□□□□□ -1.87
PUF3Q07807 BRO1YPL084W 2535 nt3.34□□□□□ -1.88
PUF3Q07807 KEL2YGR238C 2649 nt3.34□□□□□ -1.88
PUF3Q07807 CIN8YEL061C 3003 nt3.33□□□□□ -1.88
PUF3Q07807 NOP4YPL043W 2058 nt3.33□□□□□ -1.88
PUF3Q07807 YHL006W-AYHL006W-A 354 nt3.33□□□□□ -1.88
PUF3Q07807 YIL059CYIL059C 366 nt3.33□□□□□ -1.88
PUF3Q07807 RPL38YLR325C 237 nt3.33□□□□□ -1.88
PUF3Q07807 YPR014CYPR014C 330 nt3.33□□□□□ -1.88
PUF3Q07807 REG1YDR028C 3045 nt3.33□□□□□ -1.88
PUF3Q07807 DIS3YOL021C 3006 nt3.33□□□□□ -1.88
PUF3Q07807 MSH2YOL090W 2895 nt3.33□□□□□ -1.88
PUF3Q07807 ENA2YDR039C 3276 nt3.32□□□□□ -1.88
PUF3Q07807 ENA1YDR040C 3276 nt3.32□□□□□ -1.88
PUF3Q07807 SWA2YDR320C 2007 nt3.32□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 33.7 ms