Protein–RNA interactions for Protein: Q04437

YKU80, ATP-dependent DNA helicase II subunit 2, yeastyeast

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YKU80Q04437 AFI1YOR129C 2682 nt2.39□□□□□ -2.03
YKU80Q04437 HMLALPHA2YCL067C 633 nt2.39□□□□□ -2.03
YKU80Q04437 MATALPHA2YCR039C 633 nt2.39□□□□□ -2.03
YKU80Q04437 YER006C-AYER006C-A 318 nt2.39□□□□□ -2.03
YKU80Q04437 SNC1YAL030W 354 nt2.39□□□□□ -2.03
YKU80Q04437 YOR248WYOR248W 303 nt2.39□□□□□ -2.03
YKU80Q04437 TOF1YNL273W 3717 nt2.39□□□□□ -2.03
YKU80Q04437 IRC10YOL015W 1761 nt2.38□□□□□ -2.03
YKU80Q04437 UBR1YGR184C 5853 nt2.38□□□□□ -2.03
YKU80Q04437 MPH1YIR002C 2982 nt2.38□□□□□ -2.03
YKU80Q04437 SMC6YLR383W 3345 nt2.38□□□□□ -2.03
YKU80Q04437 ATP17YDR377W 306 nt2.38□□□□□ -2.03
YKU80Q04437 tW(CCA)G1tW(CCA)G1 72 nt2.38□□□□□ -2.03
YKU80Q04437 tW(CCA)G2tW(CCA)G2 72 nt2.38□□□□□ -2.03
YKU80Q04437 tW(CCA)JtW(CCA)J 72 nt2.38□□□□□ -2.03
YKU80Q04437 tW(CCA)KtW(CCA)K 72 nt2.38□□□□□ -2.03
YKU80Q04437 tW(CCA)MtW(CCA)M 72 nt2.38□□□□□ -2.03
YKU80Q04437 tW(CCA)PtW(CCA)P 72 nt2.38□□□□□ -2.03
YKU80Q04437 MSL1YIR009W 336 nt2.38□□□□□ -2.03
YKU80Q04437 CLN3YAL040C 1743 nt2.38□□□□□ -2.03
YKU80Q04437 RSA1YPL193W 1146 nt2.38□□□□□ -2.03
YKU80Q04437 NAN1YPL126W 2691 nt2.37□□□□□ -2.03
YKU80Q04437 RPL27BYDR471W 411 nt2.37□□□□□ -2.03
YKU80Q04437 VOA1YGR106C 798 nt2.37□□□□□ -2.03
YKU80Q04437 NCE101YJL205C 162 nt2.37□□□□□ -2.03
YKU80Q04437 YKL063CYKL063C 504 nt2.37□□□□□ -2.03
YKU80Q04437 YAL059C-AYAL059C-A 423 nt2.37□□□□□ -2.03
YKU80Q04437 YOR050CYOR050C 348 nt2.37□□□□□ -2.03
YKU80Q04437 YPR039WYPR039W 336 nt2.37□□□□□ -2.03
YKU80Q04437 MCD1YDL003W 1701 nt2.37□□□□□ -2.03
YKU80Q04437 BFA1YJR053W 1725 nt2.37□□□□□ -2.03
YKU80Q04437 MET18YIL128W 3099 nt2.36□□□□□ -2.03
YKU80Q04437 NIC96YFR002W 2520 nt2.36□□□□□ -2.03
YKU80Q04437 CDC53YDL132W 2448 nt2.36□□□□□ -2.03
YKU80Q04437 YFL019CYFL019C 354 nt2.36□□□□□ -2.03
YKU80Q04437 YKL202WYKL202W 582 nt2.36□□□□□ -2.03
YKU80Q04437 YNL324WYNL324W 396 nt2.36□□□□□ -2.03
YKU80Q04437 VPS52YDR484W 1926 nt2.36□□□□□ -2.03
YKU80Q04437 DNA2YHR164C 4569 nt2.36□□□□□ -2.03
YKU80Q04437 STH1YIL126W 4080 nt2.35□□□□□ -2.03
YKU80Q04437 snR79snR79 84 nt2.35□□□□□ -2.03
YKU80Q04437 YLR264C-AYLR264C-A 117 nt2.35□□□□□ -2.03
YKU80Q04437 TIF11YMR260C 462 nt2.35□□□□□ -2.03
YKU80Q04437 ROX1YPR065W 1107 nt2.35□□□□□ -2.03
YKU80Q04437 SLN1YIL147C 3663 nt2.35□□□□□ -2.03
YKU80Q04437 NOP14YDL148C 2433 nt2.34□□□□□ -2.03
YKU80Q04437 INO80YGL150C 4470 nt2.34□□□□□ -2.03
YKU80Q04437 SNF5YBR289W 2718 nt2.34□□□□□ -2.03
YKU80Q04437 LSO2YGR169C-A 279 nt2.34□□□□□ -2.03
YKU80Q04437 YHR032W-AYHR032W-A 180 nt2.34□□□□□ -2.03
YKU80Q04437 GRX8YLR364W 330 nt2.34□□□□□ -2.03
YKU80Q04437 RPB5YBR154C 648 nt2.34□□□□□ -2.03
YKU80Q04437 CRM1YGR218W 3255 nt2.34□□□□□ -2.03
YKU80Q04437 IPT1YDR072C 1584 nt2.34□□□□□ -2.03
YKU80Q04437 VPH1YOR270C 2523 nt2.34□□□□□ -2.04
YKU80Q04437 IST2YBR086C 2841 nt2.33□□□□□ -2.04
YKU80Q04437 PET309YLR067C 2898 nt2.33□□□□□ -2.04
YKU80Q04437 YDL041WYDL041W 354 nt2.33□□□□□ -2.04
YKU80Q04437 NOP10YHR072W-A 177 nt2.33□□□□□ -2.04
YKU80Q04437 YLR101CYLR101C 396 nt2.33□□□□□ -2.04
YKU80Q04437 snR13snR13 124 nt2.33□□□□□ -2.04
YKU80Q04437 KAR3YPR141C 2190 nt2.33□□□□□ -2.04
YKU80Q04437 GDS1YOR355W 1569 nt2.32□□□□□ -2.04
YKU80Q04437 YCR064CYCR064C 411 nt2.32□□□□□ -2.04
YKU80Q04437 HMRA1YCR097W 381 nt2.32□□□□□ -2.04
YKU80Q04437 GET1YGL020C 708 nt2.32□□□□□ -2.04
YKU80Q04437 YGR025WYGR025W 303 nt2.32□□□□□ -2.04
YKU80Q04437 YGR042WYGR042W 816 nt2.32□□□□□ -2.04
YKU80Q04437 SNC2YOR327C 348 nt2.32□□□□□ -2.04
YKU80Q04437 RTC6YPL183W-A 282 nt2.32□□□□□ -2.04
YKU80Q04437 RTT101YJL047C 2529 nt2.32□□□□□ -2.04
YKU80Q04437 SCP160YJL080C 3669 nt2.32□□□□□ -2.04
YKU80Q04437 SEC16YPL085W 6588 nt2.32□□□□□ -2.04
YKU80Q04437 SCD5YOR329C 2619 nt2.32□□□□□ -2.04
YKU80Q04437 SIR4YDR227W 4077 nt2.32□□□□□ -2.04
YKU80Q04437 RIC1YLR039C 3171 nt2.31□□□□□ -2.04
YKU80Q04437 snR70snR70 164 nt2.31□□□□□ -2.04
YKU80Q04437 YER068C-AYER068C-A 432 nt2.31□□□□□ -2.04
YKU80Q04437 YIL156W-BYIL156W-B 222 nt2.31□□□□□ -2.04
YKU80Q04437 YKL165C-AYKL165C-A 234 nt2.31□□□□□ -2.04
YKU80Q04437 EMC6YLL014W 327 nt2.31□□□□□ -2.04
YKU80Q04437 SEC22YLR268W 645 nt2.31□□□□□ -2.04
YKU80Q04437 YMR324CYMR324C 243 nt2.31□□□□□ -2.04
YKU80Q04437 CDC33YOL139C 642 nt2.31□□□□□ -2.04
YKU80Q04437 FYV12YOR183W 390 nt2.31□□□□□ -2.04
YKU80Q04437 YBR032WYBR032W 303 nt2.31□□□□□ -2.04
YKU80Q04437 CDC60YPL160W 3273 nt2.31□□□□□ -2.04
YKU80Q04437 SGS1YMR190C 4344 nt2.31□□□□□ -2.04
YKU80Q04437 PDR11YIL013C 4236 nt2.31□□□□□ -2.04
YKU80Q04437 BUB1YGR188C 3066 nt2.31□□□□□ -2.04
YKU80Q04437 SGD1YLR336C 2700 nt2.3□□□□□ -2.04
YKU80Q04437 BNI1YNL271C 5862 nt2.3□□□□□ -2.04
YKU80Q04437 YHR180W-AYHR180W-A 183 nt2.3□□□□□ -2.04
YKU80Q04437 CMC2YBL059C-A 330 nt2.3□□□□□ -2.04
YKU80Q04437 SPC72YAL047C 1869 nt2.3□□□□□ -2.04
YKU80Q04437 MGM1YOR211C 2646 nt2.3□□□□□ -2.04
YKU80Q04437 IRA2YOL081W 9240 nt2.3□□□□□ -2.04
YKU80Q04437 SAP185YJL098W 3177 nt2.3□□□□□ -2.04
YKU80Q04437 RTT107YHR154W 3213 nt2.3□□□□□ -2.04
YKU80Q04437 TRL1YJL087C 2484 nt2.29□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 89.9 ms