Protein–RNA interactions for Protein: P54787

VPS9, Vacuolar protein sorting-associated protein 9, yeastyeast

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS9P54787 CRM1YGR218W 3255 nt2.05□□□□□ -2.08
VPS9P54787 YDL016CYDL016C 303 nt2.05□□□□□ -2.08
VPS9P54787 SPO13YHR014W 876 nt2.05□□□□□ -2.08
VPS9P54787 YIL029CYIL029C 429 nt2.05□□□□□ -2.08
VPS9P54787 HSK3YKL138C-A 210 nt2.05□□□□□ -2.08
VPS9P54787 AFB1YLR040C 675 nt2.05□□□□□ -2.08
VPS9P54787 SIP18YMR175W 240 nt2.05□□□□□ -2.08
VPS9P54787 CFT2YLR115W 2580 nt2.05□□□□□ -2.08
VPS9P54787 STB4YMR019W 2850 nt2.05□□□□□ -2.08
VPS9P54787 VPS35YJL154C 2835 nt2.04□□□□□ -2.08
VPS9P54787 YDL068WYDL068W 330 nt2.04□□□□□ -2.08
VPS9P54787 YDL158CYDL158C 309 nt2.04□□□□□ -2.08
VPS9P54787 YPS5YGL259W 498 nt2.04□□□□□ -2.08
VPS9P54787 LCL2YLR104W 396 nt2.04□□□□□ -2.08
VPS9P54787 NAM7YMR080C 2916 nt2.04□□□□□ -2.08
VPS9P54787 ATG11YPR049C 3537 nt2.04□□□□□ -2.08
VPS9P54787 SOK2YMR016C 2358 nt2.03□□□□□ -2.08
VPS9P54787 YCR087C-AYCR087C-A 462 nt2.03□□□□□ -2.08
VPS9P54787 YBL012CYBL012C 402 nt2.03□□□□□ -2.08
VPS9P54787 VPS15YBR097W 4365 nt2.03□□□□□ -2.09
VPS9P54787 UTP13YLR222C 2454 nt2.02□□□□□ -2.09
VPS9P54787 ELG1YOR144C 2376 nt2.02□□□□□ -2.09
VPS9P54787 DAD4YDR320C-A 219 nt2.02□□□□□ -2.09
VPS9P54787 YEL018C-AYEL018C-A 534 nt2.02□□□□□ -2.09
VPS9P54787 CAJ1YER048C 1176 nt2.02□□□□□ -2.09
VPS9P54787 LSO2YGR169C-A 279 nt2.02□□□□□ -2.09
VPS9P54787 RRF1YHR038W 693 nt2.02□□□□□ -2.09
VPS9P54787 BUD19YJL188C 309 nt2.02□□□□□ -2.09
VPS9P54787 SNC2YOR327C 348 nt2.02□□□□□ -2.09
VPS9P54787 YPL197CYPL197C 414 nt2.02□□□□□ -2.09
VPS9P54787 YCL023CYCL023C 348 nt2.02□□□□□ -2.09
VPS9P54787 YDR029WYDR029W 315 nt2.01□□□□□ -2.09
VPS9P54787 PRM8YGL053W 714 nt2.01□□□□□ -2.09
VPS9P54787 PEP1YBL017C 4740 nt2□□□□□ -2.09
VPS9P54787 HCS1YKL017C 2052 nt2□□□□□ -2.09
VPS9P54787 CDC27YBL084C 2277 nt2□□□□□ -2.09
VPS9P54787 PET309YLR067C 2898 nt2□□□□□ -2.09
VPS9P54787 SEC31YDL195W 3822 nt2□□□□□ -2.09
VPS9P54787 RTR2YDR066C 591 nt2□□□□□ -2.09
VPS9P54787 YGL069CYGL069C 465 nt2□□□□□ -2.09
VPS9P54787 YHR052W-AYHR052W-A 195 nt2□□□□□ -2.09
VPS9P54787 YHR054W-AYHR054W-A 195 nt2□□□□□ -2.09
VPS9P54787 YNR025CYNR025C 360 nt2□□□□□ -2.09
VPS9P54787 YPL238CYPL238C 390 nt2□□□□□ -2.09
VPS9P54787 MUD2YKL074C 1584 nt2□□□□□ -2.09
VPS9P54787 IRC20YLR247C 4671 nt2□□□□□ -2.09
VPS9P54787 PLC1YPL268W 2610 nt2□□□□□ -2.09
VPS9P54787 NEO1YIL048W 3456 nt2□□□□□ -2.09
VPS9P54787 SWT1YOR166C 1377 nt1.99□□□□□ -2.09
VPS9P54787 YJR140W-AYJR140W-A 150 nt1.99□□□□□ -2.09
VPS9P54787 YJR141WYJR141W 1044 nt1.99□□□□□ -2.09
VPS9P54787 UBP2YOR124C 3819 nt1.99□□□□□ -2.09
VPS9P54787 RIC1YLR039C 3171 nt1.99□□□□□ -2.09
VPS9P54787 FAB1YFR019W 6837 nt1.99□□□□□ -2.09
VPS9P54787 YNL144CYNL144C 2223 nt1.98□□□□□ -2.09
VPS9P54787 MYO4YAL029C 4416 nt1.98□□□□□ -2.09
VPS9P54787 SPC1YJR010C-A 285 nt1.98□□□□□ -2.09
VPS9P54787 IRC19YLL033W 693 nt1.98□□□□□ -2.09
VPS9P54787 TMA7YLR262C-A 195 nt1.98□□□□□ -2.09
VPS9P54787 SEC22YLR268W 645 nt1.98□□□□□ -2.09
VPS9P54787 COX7YMR256C 183 nt1.98□□□□□ -2.09
VPS9P54787 SPC29YPL124W 762 nt1.98□□□□□ -2.09
VPS9P54787 IRC10YOL015W 1761 nt1.98□□□□□ -2.09
VPS9P54787 YDR210W-AYDR210W-A 1317 nt1.97□□□□□ -2.09
VPS9P54787 YOR343W-AYOR343W-A 1317 nt1.97□□□□□ -2.09
VPS9P54787 SET2YJL168C 2202 nt1.97□□□□□ -2.09
VPS9P54787 YDL118WYDL118W 381 nt1.97□□□□□ -2.09
VPS9P54787 BTT1YDR252W 450 nt1.97□□□□□ -2.09
VPS9P54787 RPL27BYDR471W 411 nt1.97□□□□□ -2.09
VPS9P54787 tT(UGU)Q1tT(UGU)Q1 76 nt1.97□□□□□ -2.09
VPS9P54787 YAL016C-BYAL016C-B 186 nt1.97□□□□□ -2.09
VPS9P54787 BER1YLR412W 825 nt1.97□□□□□ -2.09
VPS9P54787 UBX4YMR067C 1251 nt1.97□□□□□ -2.09
VPS9P54787 SIR4YDR227W 4077 nt1.97□□□□□ -2.09
VPS9P54787 VPS52YDR484W 1926 nt1.97□□□□□ -2.09
VPS9P54787 DFG16YOR030W 1860 nt1.97□□□□□ -2.09
VPS9P54787 HSL1YKL101W 4557 nt1.96□□□□□ -2.09
VPS9P54787 YJL016WYJL016W 1686 nt1.96□□□□□ -2.1
VPS9P54787 NOT5YPR072W 1683 nt1.96□□□□□ -2.1
VPS9P54787 YOR093CYOR093C 4947 nt1.96□□□□□ -2.1
VPS9P54787 YKL111CYKL111C 336 nt1.96□□□□□ -2.1
VPS9P54787 SEN15YMR059W 387 nt1.96□□□□□ -2.1
VPS9P54787 RPH1YER169W 2391 nt1.96□□□□□ -2.1
VPS9P54787 ARP7YPR034W 1434 nt1.96□□□□□ -2.1
VPS9P54787 RNH70YGR276C 1662 nt1.96□□□□□ -2.1
VPS9P54787 HNT1YDL125C 477 nt1.95□□□□□ -2.1
VPS9P54787 YJR079WYJR079W 330 nt1.95□□□□□ -2.1
VPS9P54787 YKL044WYKL044W 321 nt1.95□□□□□ -2.1
VPS9P54787 CYB5YNL111C 363 nt1.95□□□□□ -2.1
VPS9P54787 MEI5YPL121C 669 nt1.95□□□□□ -2.1
VPS9P54787 YHR214C-BYHR214C-B 5382 nt1.95□□□□□ -2.1
VPS9P54787 LYS9YNR050C 1341 nt1.94□□□□□ -2.1
VPS9P54787 KAR3YPR141C 2190 nt1.94□□□□□ -2.1
VPS9P54787 RPC10YHR143W-A 213 nt1.94□□□□□ -2.1
VPS9P54787 ILM1YJR118C 612 nt1.94□□□□□ -2.1
VPS9P54787 RCN2YOR220W 798 nt1.94□□□□□ -2.1
VPS9P54787 GPX2YBR244W 489 nt1.94□□□□□ -2.1
VPS9P54787 GRR1YJR090C 3456 nt1.94□□□□□ -2.1
VPS9P54787 HSH155YMR288W 2916 nt1.93□□□□□ -2.1
VPS9P54787 snR84snR84 550 nt1.93□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 181.7 ms