RNA–Protein interactions for RNA: YPR072W

NOT5, Transcript of Subunit of CCR4-NOT global transcriptional regulator, yeastyeast

Gene NOT5, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NOT5YPR072W MTC1P47018 478 aaKnown RBP10.82□□□□□ -0.68
NOT5YPR072W FAP1P53971 965 aa9.92□□□□□ -0.82
NOT5YPR072W DRS1P32892 752 aaKnown RBP9.9□□□□□ -0.83
NOT5YPR072W PRY3P47033 881 aa9.35□□□□□ -0.91
NOT5YPR072W PRI1P10363 409 aa9.23□□□□□ -0.93
NOT5YPR072W AAD16Q02895 342 aa9.19□□□□□ -0.94
NOT5YPR072W ISW2Q08773 1120 aa8.99□□□□□ -0.97
NOT5YPR072W RPG1P38249 964 aaKnown RBP8.91□□□□□ -0.98
NOT5YPR072W YCK3P39962 524 aa8.88□□□□□ -0.99
NOT5YPR072W HAA1Q12753 694 aaKnown RBP8.75□□□□□ -1.01
NOT5YPR072W DIP2Q12220 943 aaPredicted RBP8.75□□□□□ -1.01
NOT5YPR072W TSR3Q12094 313 aaKnown RBP8.71□□□□□ -1.02
NOT5YPR072W RSE1Q04693 1361 aaKnown RBP8.51□□□□□ -1.05
NOT5YPR072W AVT3P36062 692 aa8.4□□□□□ -1.07
NOT5YPR072W MRPL32P25348 183 aa8.35□□□□□ -1.07
NOT5YPR072W RPL17AP05740 184 aaKnown RBP8.26□□□□□ -1.09
NOT5YPR072W RPL17BP46990 184 aaKnown RBP8.26□□□□□ -1.09
NOT5YPR072W REB1P21538 810 aa8.23□□□□□ -1.09
NOT5YPR072W BFR2Q06631 534 aaKnown RBP8.13□□□□□ -1.11
NOT5YPR072W YGL015CP33199 130 aa8.06□□□□□ -1.12
NOT5YPR072W CDC27P38042 758 aa7.94□□□□□ -1.14
NOT5YPR072W SPT21P35209 758 aa7.92□□□□□ -1.14
NOT5YPR072W YKR023WP36119 530 aaKnown RBP7.86□□□□□ -1.15
NOT5YPR072W UBP10P53874 792 aaPredicted RBP7.73□□□□□ -1.17
NOT5YPR072W MAP2P38174 421 aaKnown RBP7.7□□□□□ -1.18
NOT5YPR072W TFC8Q12308 588 aa7.7□□□□□ -1.18
NOT5YPR072W HOP09932 586 aa7.69□□□□□ -1.18
NOT5YPR072W DCD1P06773 312 aa7.67□□□□□ -1.18
NOT5YPR072W RIM101P33400 625 aa7.59□□□□□ -1.19
NOT5YPR072W SCY1P53009 804 aa7.51□□□□□ -1.21
NOT5YPR072W BUD31P25337 157 aaPredicted RBP7.5□□□□□ -1.21
NOT5YPR072W BCH2P36122 765 aa7.43□□□□□ -1.22
NOT5YPR072W SLX5P32828 619 aaKnown RBP7.41□□□□□ -1.22
NOT5YPR072W TIF4632P39936 914 aaKnown RBP7.38□□□□□ -1.23
NOT5YPR072W TGL3P40308 642 aa7.37□□□□□ -1.23
NOT5YPR072W OXP1P28273 1286 aa7.32□□□□□ -1.24
NOT5YPR072W EPS1P40557 701 aa7.24□□□□□ -1.25
NOT5YPR072W BDF1P35817 686 aa7.21□□□□□ -1.26
NOT5YPR072W PTP3P40048 928 aa7.19□□□□□ -1.26
NOT5YPR072W UBP9P39967 754 aa7.18□□□□□ -1.26
NOT5YPR072W YIL055CP40523 627 aaKnown RBP7.18□□□□□ -1.26
NOT5YPR072W SIS1P25294 352 aaKnown RBP7.09□□□□□ -1.27
NOT5YPR072W RSM7P47150 247 aa7.09□□□□□ -1.27
NOT5YPR072W MST1P07236 462 aa7.06□□□□□ -1.28
NOT5YPR072W YAH1Q12184 172 aaKnown RBP7.06□□□□□ -1.28
NOT5YPR072W AI2P03876 854 aa7.05□□□□□ -1.28
NOT5YPR072W BBC1P47068 1157 aa7.05□□□□□ -1.28
NOT5YPR072W NSR1P27476 414 aaKnown RBP RIP-Chip data7.01□□□□□ -1.29not detected
NOT5YPR072W TFA1P36100 482 aa7.01□□□□□ -1.29
NOT5YPR072W YOR238WQ08634 303 aa7□□□□□ -1.29
NOT5YPR072W YBL029C-AQ3E756 94 aa6.96□□□□□ -1.29
NOT5YPR072W YLR271WQ06152 274 aa6.96□□□□□ -1.3
NOT5YPR072W YAP5P40574 245 aa6.93□□□□□ -1.3
NOT5YPR072W VNX1P42839 908 aa6.88□□□□□ -1.31
NOT5YPR072W PSD2P53037 1138 aaKnown RBP6.88□□□□□ -1.31
NOT5YPR072W WSC3Q12215 556 aa6.82□□□□□ -1.32
NOT5YPR072W SPP1Q03012 353 aa6.81□□□□□ -1.32
NOT5YPR072W SSP1P38871 571 aa6.8□□□□□ -1.32
NOT5YPR072W MRM1P25270 412 aa6.78□□□□□ -1.32
NOT5YPR072W GTT3P39996 337 aa6.77□□□□□ -1.32
NOT5YPR072W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
NOT5YPR072W TIF11P38912 153 aaKnown RBP6.74□□□□□ -1.33
NOT5YPR072W PIB1Q06651 286 aa6.74□□□□□ -1.33
NOT5YPR072W CST9Q06032 482 aa6.71□□□□□ -1.34
NOT5YPR072W FKH1P40466 484 aa6.69□□□□□ -1.34
NOT5YPR072W AIR2Q12476 344 aaKnown RBP6.69□□□□□ -1.34
NOT5YPR072W MGA2P40578 1113 aa6.66□□□□□ -1.34
NOT5YPR072W VPS29P38759 282 aa6.65□□□□□ -1.34
NOT5YPR072W ULI1P43604 169 aa6.65□□□□□ -1.35
NOT5YPR072W IOC2Q12072 812 aa6.65□□□□□ -1.35
NOT5YPR072W YMR1P47147 688 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
NOT5YPR072W LDB19Q12502 818 aa6.64□□□□□ -1.35
NOT5YPR072W RTG3P38165 486 aa6.62□□□□□ -1.35
NOT5YPR072W MSB4Q12317 492 aa6.62□□□□□ -1.35
NOT5YPR072W DBP1P24784 617 aaKnown RBP6.61□□□□□ -1.35
NOT5YPR072W YOL036WQ08206 761 aa6.6□□□□□ -1.35
NOT5YPR072W STS1P38637 319 aa6.59□□□□□ -1.35
NOT5YPR072W YFR006WP43590 535 aa6.59□□□□□ -1.35
NOT5YPR072W YJL171CP46992 396 aa6.59□□□□□ -1.35
NOT5YPR072W EAP1P36041 632 aaKnown RBP6.57□□□□□ -1.36
NOT5YPR072W SET4P42948 560 aa6.57□□□□□ -1.36
NOT5YPR072W VMA1P17255 1071 aaKnown RBP6.56□□□□□ -1.36
NOT5YPR072W RCR1P38212 213 aa6.56□□□□□ -1.36
NOT5YPR072W SAM3Q08986 587 aa6.54□□□□□ -1.36
NOT5YPR072W TRP5P00931 707 aaKnown RBP6.53□□□□□ -1.36
NOT5YPR072W BMT6Q12291 365 aa6.52□□□□□ -1.37
NOT5YPR072W RTG1P32607 177 aa6.51□□□□□ -1.37
NOT5YPR072W YNL035CP53962 389 aaKnown RBP6.46□□□□□ -1.37
NOT5YPR072W NCR1Q12200 1170 aa6.45□□□□□ -1.38
NOT5YPR072W SEC61P32915 480 aa6.45□□□□□ -1.38
NOT5YPR072W GYP5Q12344 894 aa6.42□□□□□ -1.38
NOT5YPR072W ABP1P15891 592 aaKnown RBP6.41□□□□□ -1.38
NOT5YPR072W DAN4P47179 1161 aa6.39□□□□□ -1.39
NOT5YPR072W JIP4Q03361 876 aa6.38□□□□□ -1.39
NOT5YPR072W HTA1P04911 132 aaKnown RBP6.36□□□□□ -1.39
NOT5YPR072W HTA2P04912 132 aa6.36□□□□□ -1.39
NOT5YPR072W DCW1P36091 449 aa6.36□□□□□ -1.39
NOT5YPR072W TFG1P41895 735 aaPredicted RBP6.34□□□□□ -1.39
NOT5YPR072W RAM2P29703 316 aa6.33□□□□□ -1.4
NOT5YPR072W YEL023CP39992 682 aa6.33□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms