RNA–Protein interactions for RNA: YOR343W-A

YOR343W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YOR343W-A, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOR343W-AYOR343W-A MTC1P47018 478 aaKnown RBP13.43□□□□□ -0.26
YOR343W-AYOR343W-A DRS1P32892 752 aaKnown RBP12.63□□□□□ -0.39
YOR343W-AYOR343W-A FAP1P53971 965 aa12.11□□□□□ -0.47
YOR343W-AYOR343W-A PRY3P47033 881 aa11.44□□□□□ -0.58
YOR343W-AYOR343W-A PRI1P10363 409 aa11.25□□□□□ -0.61
YOR343W-AYOR343W-A AAD16Q02895 342 aa11.12□□□□□ -0.63
YOR343W-AYOR343W-A ISW2Q08773 1120 aa11.04□□□□□ -0.64
YOR343W-AYOR343W-A DIP2Q12220 943 aaPredicted RBP11.03□□□□□ -0.64
YOR343W-AYOR343W-A RPG1P38249 964 aaKnown RBP10.95□□□□□ -0.66
YOR343W-AYOR343W-A YCK3P39962 524 aa10.79□□□□□ -0.68
YOR343W-AYOR343W-A HAA1Q12753 694 aaKnown RBP10.75□□□□□ -0.69
YOR343W-AYOR343W-A AVT3P36062 692 aa10.73□□□□□ -0.69
YOR343W-AYOR343W-A RSE1Q04693 1361 aaKnown RBP10.62□□□□□ -0.71
YOR343W-AYOR343W-A TSR3Q12094 313 aaKnown RBP10.61□□□□□ -0.71
YOR343W-AYOR343W-A BFR2Q06631 534 aaKnown RBP10.55□□□□□ -0.72
YOR343W-AYOR343W-A RPL17AP05740 184 aaKnown RBP10.29□□□□□ -0.76
YOR343W-AYOR343W-A RPL17BP46990 184 aaKnown RBP10.29□□□□□ -0.76
YOR343W-AYOR343W-A REB1P21538 810 aa10.18□□□□□ -0.78
YOR343W-AYOR343W-A MRPL32P25348 183 aa10.15□□□□□ -0.78
YOR343W-AYOR343W-A SPT21P35209 758 aa9.94□□□□□ -0.82
YOR343W-AYOR343W-A YKR023WP36119 530 aaKnown RBP9.78□□□□□ -0.84
YOR343W-AYOR343W-A CDC27P38042 758 aa9.77□□□□□ -0.85
YOR343W-AYOR343W-A YGL015CP33199 130 aa9.71□□□□□ -0.86
YOR343W-AYOR343W-A RIM101P33400 625 aa9.58□□□□□ -0.88
YOR343W-AYOR343W-A TFC8Q12308 588 aa9.56□□□□□ -0.88
YOR343W-AYOR343W-A HOP09932 586 aa9.53□□□□□ -0.88
YOR343W-AYOR343W-A DCD1P06773 312 aa9.5□□□□□ -0.89
YOR343W-AYOR343W-A BUD31P25337 157 aaPredicted RBP9.46□□□□□ -0.9
YOR343W-AYOR343W-A UBP10P53874 792 aaPredicted RBP9.44□□□□□ -0.9
YOR343W-AYOR343W-A TFA1P36100 482 aa9.43□□□□□ -0.9
YOR343W-AYOR343W-A MAP2P38174 421 aaKnown RBP9.42□□□□□ -0.9
YOR343W-AYOR343W-A OXP1P28273 1286 aa9.29□□□□□ -0.92
YOR343W-AYOR343W-A BCH2P36122 765 aa9.24□□□□□ -0.93
YOR343W-AYOR343W-A SCY1P53009 804 aa9.23□□□□□ -0.93
YOR343W-AYOR343W-A SLX5P32828 619 aaKnown RBP9.09□□□□□ -0.95
YOR343W-AYOR343W-A PTP3P40048 928 aa9.03□□□□□ -0.96
YOR343W-AYOR343W-A YIL055CP40523 627 aaKnown RBP9.02□□□□□ -0.97
YOR343W-AYOR343W-A EPS1P40557 701 aa9.02□□□□□ -0.97
YOR343W-AYOR343W-A BDF1P35817 686 aa8.98□□□□□ -0.97
YOR343W-AYOR343W-A TIF4632P39936 914 aaKnown RBP8.98□□□□□ -0.97
YOR343W-AYOR343W-A TGL3P40308 642 aa8.98□□□□□ -0.97
YOR343W-AYOR343W-A RSM7P47150 247 aa8.96□□□□□ -0.98
YOR343W-AYOR343W-A YAH1Q12184 172 aaKnown RBP8.95□□□□□ -0.98
YOR343W-AYOR343W-A YLR271WQ06152 274 aa8.87□□□□□ -0.99
YOR343W-AYOR343W-A AI2P03876 854 aa8.86□□□□□ -0.99
YOR343W-AYOR343W-A SIS1P25294 352 aaKnown RBP8.84□□□□□ -0.99
YOR343W-AYOR343W-A BBC1P47068 1157 aa8.81□□□□□ -1
YOR343W-AYOR343W-A SSP1P38871 571 aa8.76□□□□□ -1.01
YOR343W-AYOR343W-A PSD2P53037 1138 aaKnown RBP8.75□□□□□ -1.01
YOR343W-AYOR343W-A UBP9P39967 754 aa8.73□□□□□ -1.01
YOR343W-AYOR343W-A NSR1P27476 414 aaKnown RBP RIP-Chip data8.68□□□□□ -1.02not detected
YOR343W-AYOR343W-A MST1P07236 462 aa8.67□□□□□ -1.02
YOR343W-AYOR343W-A ARP8Q12386 881 aaKnown RBP RIP-Chip data8.63□□□□□ -1.03not detected
YOR343W-AYOR343W-A YOR238WQ08634 303 aa8.59□□□□□ -1.03
YOR343W-AYOR343W-A CST9Q06032 482 aa8.56□□□□□ -1.04
YOR343W-AYOR343W-A MRM1P25270 412 aa8.55□□□□□ -1.04
YOR343W-AYOR343W-A YAP5P40574 245 aa8.55□□□□□ -1.04
YOR343W-AYOR343W-A MGA2P40578 1113 aa8.53□□□□□ -1.04
YOR343W-AYOR343W-A YBL029C-AQ3E756 94 aa8.47□□□□□ -1.05
YOR343W-AYOR343W-A VPS29P38759 282 aa8.41□□□□□ -1.06
YOR343W-AYOR343W-A VNX1P42839 908 aa8.4□□□□□ -1.06
YOR343W-AYOR343W-A PIB1Q06651 286 aa8.38□□□□□ -1.07
YOR343W-AYOR343W-A RTG3P38165 486 aa8.36□□□□□ -1.07
YOR343W-AYOR343W-A RCR1P38212 213 aa8.36□□□□□ -1.07
YOR343W-AYOR343W-A YMR1P47147 688 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08not detected
YOR343W-AYOR343W-A WSC3Q12215 556 aa8.33□□□□□ -1.08
YOR343W-AYOR343W-A STS1P38637 319 aa8.31□□□□□ -1.08
YOR343W-AYOR343W-A GTT3P39996 337 aa8.31□□□□□ -1.08
YOR343W-AYOR343W-A DBP1P24784 617 aaKnown RBP8.29□□□□□ -1.08
YOR343W-AYOR343W-A YFR006WP43590 535 aa8.28□□□□□ -1.08
YOR343W-AYOR343W-A SPP1Q03012 353 aa8.27□□□□□ -1.09
YOR343W-AYOR343W-A TIF11P38912 153 aaKnown RBP8.25□□□□□ -1.09
YOR343W-AYOR343W-A VMA1P17255 1071 aaKnown RBP8.22□□□□□ -1.09
YOR343W-AYOR343W-A YOL036WQ08206 761 aa8.19□□□□□ -1.1
YOR343W-AYOR343W-A SAM3Q08986 587 aa8.19□□□□□ -1.1
YOR343W-AYOR343W-A MSB4Q12317 492 aa8.18□□□□□ -1.1
YOR343W-AYOR343W-A IOC2Q12072 812 aa8.17□□□□□ -1.1
YOR343W-AYOR343W-A RAM2P29703 316 aa8.16□□□□□ -1.1
YOR343W-AYOR343W-A FKH1P40466 484 aa8.16□□□□□ -1.1
YOR343W-AYOR343W-A ULI1P43604 169 aa8.15□□□□□ -1.1
YOR343W-AYOR343W-A SET4P42948 560 aa8.14□□□□□ -1.11
YOR343W-AYOR343W-A AIR2Q12476 344 aaKnown RBP8.13□□□□□ -1.11
YOR343W-AYOR343W-A LDB19Q12502 818 aa8.11□□□□□ -1.11
YOR343W-AYOR343W-A EAP1P36041 632 aaKnown RBP8.08□□□□□ -1.12
YOR343W-AYOR343W-A TRP5P00931 707 aaKnown RBP8.07□□□□□ -1.12
YOR343W-AYOR343W-A MAK11P20484 414 aaKnown RBP8.07□□□□□ -1.12
YOR343W-AYOR343W-A EDS1P38073 919 aa8.03□□□□□ -1.12
YOR343W-AYOR343W-A GYP5Q12344 894 aa8.02□□□□□ -1.13
YOR343W-AYOR343W-A RTG1P32607 177 aa8□□□□□ -1.13
YOR343W-AYOR343W-A ABP1P15891 592 aaKnown RBP7.99□□□□□ -1.13
YOR343W-AYOR343W-A YNL035CP53962 389 aaKnown RBP7.98□□□□□ -1.13
YOR343W-AYOR343W-A COQ8P27697 501 aa7.96□□□□□ -1.14
YOR343W-AYOR343W-A MIF2P35201 549 aa7.96□□□□□ -1.14
YOR343W-AYOR343W-A PTC3P34221 468 aaKnown RBP7.95□□□□□ -1.14
YOR343W-AYOR343W-A DCW1P36091 449 aa7.95□□□□□ -1.14
YOR343W-AYOR343W-A DAN4P47179 1161 aa7.95□□□□□ -1.14
YOR343W-AYOR343W-A SEC61P32915 480 aa7.94□□□□□ -1.14
YOR343W-AYOR343W-A HTA1P04911 132 aaKnown RBP7.93□□□□□ -1.14
YOR343W-AYOR343W-A HTA2P04912 132 aa7.93□□□□□ -1.14
YOR343W-AYOR343W-A YJL171CP46992 396 aa7.92□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms