Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 LSM7YNL147W 348 nt1.68□□□□□ -2.14
UFD1P53044 ATX2YOR079C 942 nt1.68□□□□□ -2.14
UFD1P53044 YOR105WYOR105W 327 nt1.68□□□□□ -2.14
UFD1P53044 SNU56YDR240C 1479 nt1.68□□□□□ -2.14
UFD1P53044 UTP13YLR222C 2454 nt1.67□□□□□ -2.14
UFD1P53044 DNF3YMR162C 4971 nt1.67□□□□□ -2.14
UFD1P53044 BPH1YCR032W 6504 nt1.67□□□□□ -2.14
UFD1P53044 BFA1YJR053W 1725 nt1.67□□□□□ -2.14
UFD1P53044 RTR2YDR066C 591 nt1.67□□□□□ -2.14
UFD1P53044 BNA7YDR428C 786 nt1.67□□□□□ -2.14
UFD1P53044 TIM10YHR005C-A 282 nt1.67□□□□□ -2.14
UFD1P53044 TIM8YJR135W-A 264 nt1.67□□□□□ -2.14
UFD1P53044 IPT1YDR072C 1584 nt1.67□□□□□ -2.14
UFD1P53044 YOR343W-BYOR343W-B 5313 nt1.67□□□□□ -2.14
UFD1P53044 MGA2YIR033W 3342 nt1.66□□□□□ -2.14
UFD1P53044 STE18YJR086W 333 nt1.66□□□□□ -2.14
UFD1P53044 CSI1YMR025W 888 nt1.66□□□□□ -2.14
UFD1P53044 YPL197CYPL197C 414 nt1.66□□□□□ -2.14
UFD1P53044 ATG11YPR049C 3537 nt1.65□□□□□ -2.14
UFD1P53044 INO80YGL150C 4470 nt1.65□□□□□ -2.14
UFD1P53044 UTP21YLR409C 2820 nt1.65□□□□□ -2.14
UFD1P53044 VPH1YOR270C 2523 nt1.65□□□□□ -2.15
UFD1P53044 RUD3YOR216C 1455 nt1.65□□□□□ -2.15
UFD1P53044 MZM1YDR493W 372 nt1.65□□□□□ -2.15
UFD1P53044 GIC1YHR061C 945 nt1.65□□□□□ -2.15
UFD1P53044 NOP10YHR072W-A 177 nt1.65□□□□□ -2.15
UFD1P53044 CMS1YLR003C 876 nt1.65□□□□□ -2.15
UFD1P53044 PHO80YOL001W 882 nt1.65□□□□□ -2.15
UFD1P53044 SPR3YGR059W 1539 nt1.65□□□□□ -2.15
UFD1P53044 MDM32YOR147W 1869 nt1.65□□□□□ -2.15
UFD1P53044 YNL144CYNL144C 2223 nt1.64□□□□□ -2.15
UFD1P53044 NIC96YFR002W 2520 nt1.64□□□□□ -2.15
UFD1P53044 YLR035C-AYLR035C-A 3468 nt1.64□□□□□ -2.15
UFD1P53044 MET32YDR253C 576 nt1.64□□□□□ -2.15
UFD1P53044 CAJ1YER048C 1176 nt1.64□□□□□ -2.15
UFD1P53044 SPC1YJR010C-A 285 nt1.64□□□□□ -2.15
UFD1P53044 YJR140W-AYJR140W-A 150 nt1.64□□□□□ -2.15
UFD1P53044 YNL010WYNL010W 726 nt1.64□□□□□ -2.15
UFD1P53044 SVS1YPL163C 783 nt1.64□□□□□ -2.15
UFD1P53044 PEX8YGR077C 1770 nt1.64□□□□□ -2.15
UFD1P53044 VMR1YHL035C 4779 nt1.64□□□□□ -2.15
UFD1P53044 SEC31YDL195W 3822 nt1.63□□□□□ -2.15
UFD1P53044 YKL044WYKL044W 321 nt1.63□□□□□ -2.15
UFD1P53044 YKL111CYKL111C 336 nt1.63□□□□□ -2.15
UFD1P53044 RPB11YOL005C 363 nt1.63□□□□□ -2.15
UFD1P53044 RPB5YBR154C 648 nt1.63□□□□□ -2.15
UFD1P53044 VPS8YAL002W 3825 nt1.63□□□□□ -2.15
UFD1P53044 SOK2YMR016C 2358 nt1.63□□□□□ -2.15
UFD1P53044 NUP82YJL061W 2142 nt1.63□□□□□ -2.15
UFD1P53044 TRL1YJL087C 2484 nt1.62□□□□□ -2.15
UFD1P53044 MYO4YAL029C 4416 nt1.62□□□□□ -2.15
UFD1P53044 BUD2YKL092C 3315 nt1.62□□□□□ -2.15
UFD1P53044 PHR1YOR386W 1698 nt1.62□□□□□ -2.15
UFD1P53044 NAN1YPL126W 2691 nt1.62□□□□□ -2.15
UFD1P53044 DAD4YDR320C-A 219 nt1.62□□□□□ -2.15
UFD1P53044 SMB1YER029C 591 nt1.62□□□□□ -2.15
UFD1P53044 YDL068WYDL068W 330 nt1.61□□□□□ -2.15
UFD1P53044 RPA34YJL148W 702 nt1.61□□□□□ -2.15
UFD1P53044 EAF6YJR082C 342 nt1.61□□□□□ -2.15
UFD1P53044 GRX8YLR364W 330 nt1.61□□□□□ -2.15
UFD1P53044 PKR1YMR123W 369 nt1.61□□□□□ -2.15
UFD1P53044 YOR333CYOR333C 417 nt1.61□□□□□ -2.15
UFD1P53044 IRC16YPR038W 360 nt1.61□□□□□ -2.15
UFD1P53044 LOA1YPR139C 903 nt1.61□□□□□ -2.15
UFD1P53044 RTP1YMR185W 2946 nt1.6□□□□□ -2.15
UFD1P53044 SPE1YKL184W 1401 nt1.6□□□□□ -2.15
UFD1P53044 YKR075W-AYKR075W-A 270 nt1.6□□□□□ -2.15
UFD1P53044 YLR255CYLR255C 354 nt1.6□□□□□ -2.15
UFD1P53044 VPS34YLR240W 2628 nt1.6□□□□□ -2.15
UFD1P53044 RTT107YHR154W 3213 nt1.59□□□□□ -2.15
UFD1P53044 YJL016WYJL016W 1686 nt1.59□□□□□ -2.15
UFD1P53044 HOP2YGL033W 657 nt1.59□□□□□ -2.15
UFD1P53044 SMD1YGR074W 441 nt1.59□□□□□ -2.15
UFD1P53044 VOA1YGR106C 798 nt1.59□□□□□ -2.15
UFD1P53044 YGR290WYGR290W 444 nt1.59□□□□□ -2.15
UFD1P53044 RPC10YHR143W-A 213 nt1.59□□□□□ -2.15
UFD1P53044 NCE101YJL205C 162 nt1.59□□□□□ -2.15
UFD1P53044 YKL068W-AYKL068W-A 237 nt1.59□□□□□ -2.15
UFD1P53044 IRC19YLL033W 693 nt1.59□□□□□ -2.15
UFD1P53044 YMR324CYMR324C 243 nt1.59□□□□□ -2.15
UFD1P53044 GPI15YNL038W 690 nt1.59□□□□□ -2.15
UFD1P53044 NOP15YNL110C 663 nt1.59□□□□□ -2.15
UFD1P53044 PKH3YDR466W 2697 nt1.59□□□□□ -2.16
UFD1P53044 VPS15YBR097W 4365 nt1.59□□□□□ -2.16
UFD1P53044 MET18YIL128W 3099 nt1.58□□□□□ -2.16
UFD1P53044 PET309YLR067C 2898 nt1.58□□□□□ -2.16
UFD1P53044 MNE1YOR350C 1992 nt1.58□□□□□ -2.16
UFD1P53044 RTT101YJL047C 2529 nt1.58□□□□□ -2.16
UFD1P53044 RPL9AYGL147C 576 nt1.58□□□□□ -2.16
UFD1P53044 MSL1YIR009W 336 nt1.58□□□□□ -2.16
UFD1P53044 YJR079WYJR079W 330 nt1.58□□□□□ -2.16
UFD1P53044 LCL2YLR104W 396 nt1.58□□□□□ -2.16
UFD1P53044 YMR052C-AYMR052C-A 366 nt1.58□□□□□ -2.16
UFD1P53044 DDR48YMR173W 1293 nt1.58□□□□□ -2.16
UFD1P53044 COX7YMR256C 183 nt1.58□□□□□ -2.16
UFD1P53044 RTC6YPL183W-A 282 nt1.58□□□□□ -2.16
UFD1P53044 CFT2YLR115W 2580 nt1.58□□□□□ -2.16
UFD1P53044 YHR214C-CYHR214C-C 1437 nt1.57□□□□□ -2.16
UFD1P53044 IRC10YOL015W 1761 nt1.57□□□□□ -2.16
UFD1P53044 CDC53YDL132W 2448 nt1.57□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 31.7 ms