RNA–Protein interactions for RNA: YOR343W-B

YOR343W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YOR343W-B, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YOR343W-BYOR343W-B MTC1P47018 478 aaKnown RBP4.37□□□□□ -1.71
YOR343W-BYOR343W-B DRS1P32892 752 aaKnown RBP4.25□□□□□ -1.73
YOR343W-BYOR343W-B TFA1P36100 482 aa3.91□□□□□ -1.78
YOR343W-BYOR343W-B AVT3P36062 692 aa3.82□□□□□ -1.8
YOR343W-BYOR343W-B BFR2Q06631 534 aaKnown RBP3.75□□□□□ -1.81
YOR343W-BYOR343W-B DIP2Q12220 943 aaPredicted RBP3.66□□□□□ -1.82
YOR343W-BYOR343W-B RQC2Q12532 1038 aaKnown RBP3.55□□□□□ -1.84
YOR343W-BYOR343W-B ISW2Q08773 1120 aa3.53□□□□□ -1.84
YOR343W-BYOR343W-B RSE1Q04693 1361 aaKnown RBP3.52□□□□□ -1.85
YOR343W-BYOR343W-B PRI1P10363 409 aa3.48□□□□□ -1.85
YOR343W-BYOR343W-B RIM101P33400 625 aa3.38□□□□□ -1.87
YOR343W-BYOR343W-B SPT21P35209 758 aa3.37□□□□□ -1.87
YOR343W-BYOR343W-B AAD16Q02895 342 aa3.35□□□□□ -1.87
YOR343W-BYOR343W-B RPG1P38249 964 aaKnown RBP3.29□□□□□ -1.88
YOR343W-BYOR343W-B NOP53Q12080 455 aaKnown RBP3.29□□□□□ -1.88
YOR343W-BYOR343W-B SAS10Q12136 610 aaPredicted RBP3.24□□□□□ -1.89
YOR343W-BYOR343W-B NSR1P27476 414 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
YOR343W-BYOR343W-B RPL17AP05740 184 aaKnown RBP3.22□□□□□ -1.89
YOR343W-BYOR343W-B RPL17BP46990 184 aaKnown RBP3.22□□□□□ -1.89
YOR343W-BYOR343W-B LEU3P08638 886 aa3.2□□□□□ -1.9
YOR343W-BYOR343W-B LEO1P38439 464 aa3.19□□□□□ -1.9
YOR343W-BYOR343W-B IFH1P39520 1085 aa3.19□□□□□ -1.9
YOR343W-BYOR343W-B SSP1P38871 571 aa3.17□□□□□ -1.9
YOR343W-BYOR343W-B YPR148CQ06523 435 aa3.17□□□□□ -1.9
YOR343W-BYOR343W-B REB1P21538 810 aa3.16□□□□□ -1.9
YOR343W-BYOR343W-B ARP8Q12386 881 aaKnown RBP RIP-Chip data3.16□□□□□ -1.9not detected
YOR343W-BYOR343W-B UBP10P53874 792 aaPredicted RBP3.13□□□□□ -1.91
YOR343W-BYOR343W-B YKR023WP36119 530 aaKnown RBP3.12□□□□□ -1.91
YOR343W-BYOR343W-B MGA2P40578 1113 aa3.11□□□□□ -1.91
YOR343W-BYOR343W-B HAA1Q12753 694 aaKnown RBP3.11□□□□□ -1.91
YOR343W-BYOR343W-B OXP1P28273 1286 aa3.1□□□□□ -1.91
YOR343W-BYOR343W-B CKB1P43639 278 aa3.1□□□□□ -1.91
YOR343W-BYOR343W-B PSD2P53037 1138 aaKnown RBP3.1□□□□□ -1.91
YOR343W-BYOR343W-B TFC8Q12308 588 aa3.1□□□□□ -1.91
YOR343W-BYOR343W-B TAF7Q05021 590 aa3.09□□□□□ -1.91
YOR343W-BYOR343W-B MRPL32P25348 183 aa3.08□□□□□ -1.92
YOR343W-BYOR343W-B RSM7P47150 247 aa3.07□□□□□ -1.92
YOR343W-BYOR343W-B MAK21Q12176 1025 aaKnown RBP3.07□□□□□ -1.92
YOR343W-BYOR343W-B FAP1P53971 965 aa3.05□□□□□ -1.92
YOR343W-BYOR343W-B ABP1P15891 592 aaKnown RBP3.04□□□□□ -1.92
YOR343W-BYOR343W-B YLR271WQ06152 274 aa3.04□□□□□ -1.92
YOR343W-BYOR343W-B MST1P07236 462 aa3.02□□□□□ -1.93
YOR343W-BYOR343W-B MAK11P20484 414 aaKnown RBP3.01□□□□□ -1.93
YOR343W-BYOR343W-B RPN1P38764 993 aaKnown RBP3.01□□□□□ -1.93
YOR343W-BYOR343W-B AIM7Q12156 149 aa3.01□□□□□ -1.93
YOR343W-BYOR343W-B TSR3Q12094 313 aaKnown RBP3□□□□□ -1.93
YOR343W-BYOR343W-B BBC1P47068 1157 aa3□□□□□ -1.93
YOR343W-BYOR343W-B DSF2P38213 736 aa3□□□□□ -1.93
YOR343W-BYOR343W-B TGL3P40308 642 aa3□□□□□ -1.93
YOR343W-BYOR343W-B YIL055CP40523 627 aaKnown RBP3□□□□□ -1.93
YOR343W-BYOR343W-B YGL015CP33199 130 aa2.98□□□□□ -1.93
YOR343W-BYOR343W-B SAM3Q08986 587 aa2.97□□□□□ -1.93
YOR343W-BYOR343W-B YNR021WP53723 404 aaKnown RBP2.97□□□□□ -1.93
YOR343W-BYOR343W-B YCK3P39962 524 aa2.96□□□□□ -1.94
YOR343W-BYOR343W-B AI2P03876 854 aa2.95□□□□□ -1.94
YOR343W-BYOR343W-B RTG3P38165 486 aa2.94□□□□□ -1.94
YOR343W-BYOR343W-B DMA1P38823 416 aa2.93□□□□□ -1.94
YOR343W-BYOR343W-B HPC2Q01448 625 aa2.93□□□□□ -1.94
YOR343W-BYOR343W-B MSB4Q12317 492 aa2.92□□□□□ -1.94
YOR343W-BYOR343W-B CDC27P38042 758 aa2.92□□□□□ -1.94
YOR343W-BYOR343W-B HGH1P48362 394 aaKnown RBP2.92□□□□□ -1.94
YOR343W-BYOR343W-B BCH2P36122 765 aa2.92□□□□□ -1.94
YOR343W-BYOR343W-B CLB5P30283 435 aa2.91□□□□□ -1.94
YOR343W-BYOR343W-B RTT106P40161 455 aa2.91□□□□□ -1.94
YOR343W-BYOR343W-B YMR1P47147 688 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
YOR343W-BYOR343W-B RAM2P29703 316 aa2.91□□□□□ -1.94
YOR343W-BYOR343W-B EPS1P40557 701 aa2.91□□□□□ -1.94
YOR343W-BYOR343W-B MIF2P35201 549 aa2.9□□□□□ -1.94
YOR343W-BYOR343W-B COX6P00427 148 aa2.89□□□□□ -1.95
YOR343W-BYOR343W-B GAP1P19145 602 aaPredicted RBP2.89□□□□□ -1.95
YOR343W-BYOR343W-B PSE1P32337 1089 aaKnown RBP2.89□□□□□ -1.95
YOR343W-BYOR343W-B TIF4632P39936 914 aaKnown RBP2.89□□□□□ -1.95
YOR343W-BYOR343W-B BDF1P35817 686 aa2.89□□□□□ -1.95
YOR343W-BYOR343W-B VPS29P38759 282 aa2.89□□□□□ -1.95
YOR343W-BYOR343W-B REF2P42073 533 aaPredicted RBP2.89□□□□□ -1.95
YOR343W-BYOR343W-B SET1P38827 1080 aaKnown RBP2.88□□□□□ -1.95
YOR343W-BYOR343W-B KEX1P09620 729 aa2.88□□□□□ -1.95
YOR343W-BYOR343W-B PTP3P40048 928 aa2.88□□□□□ -1.95
YOR343W-BYOR343W-B SIS2P36024 562 aa2.88□□□□□ -1.95
YOR343W-BYOR343W-B NST1P53935 1240 aa2.88□□□□□ -1.95
YOR343W-BYOR343W-B YAP5P40574 245 aa2.87□□□□□ -1.95
YOR343W-BYOR343W-B PRY3P47033 881 aa2.87□□□□□ -1.95
YOR343W-BYOR343W-B AI4P03878 556 aa2.87□□□□□ -1.95
YOR343W-BYOR343W-B SPT5P27692 1063 aaKnown RBP2.86□□□□□ -1.95
YOR343W-BYOR343W-B GUT1P32190 709 aa2.86□□□□□ -1.95
YOR343W-BYOR343W-B SLX5P32828 619 aaKnown RBP2.86□□□□□ -1.95
YOR343W-BYOR343W-B CSE4P36012 229 aa2.85□□□□□ -1.95
YOR343W-BYOR343W-B EAP1P36041 632 aaKnown RBP2.85□□□□□ -1.95
YOR343W-BYOR343W-B RTF1P53064 558 aa2.85□□□□□ -1.95
YOR343W-BYOR343W-B CST9Q06032 482 aa2.85□□□□□ -1.95
YOR343W-BYOR343W-B JIP4Q03361 876 aa2.84□□□□□ -1.95
YOR343W-BYOR343W-B RLF2Q12495 606 aa2.84□□□□□ -1.95
YOR343W-BYOR343W-B MPH3P0CE00 602 aa2.83□□□□□ -1.96
YOR343W-BYOR343W-B COQ8P27697 501 aa2.83□□□□□ -1.96
YOR343W-BYOR343W-B TPD3P31383 635 aa2.83□□□□□ -1.96
YOR343W-BYOR343W-B RPP1BP10622 106 aaKnown RBP2.83□□□□□ -1.96
YOR343W-BYOR343W-B TFB4Q12004 338 aa2.83□□□□□ -1.96
YOR343W-BYOR343W-B NUP42P49686 430 aaKnown RBP2.83□□□□□ -1.96
YOR343W-BYOR343W-B NAF1P53919 492 aaKnown RBP2.83□□□□□ -1.96
YOR343W-BYOR343W-B MRX12P47084 519 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 275 ms