Protein–RNA interactions for Protein: P25043

PUP1, Proteasome subunit beta type-2, yeastyeast

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUP1P25043 YGL069CYGL069C 465 nt3.6□□□□□ -1.83
PUP1P25043 YML007C-AYML007C-A 111 nt3.6□□□□□ -1.83
PUP1P25043 YMR172C-AYMR172C-A 384 nt3.6□□□□□ -1.83
PUP1P25043 NUP159YIL115C 4383 nt3.6□□□□□ -1.83
PUP1P25043 SWI1YPL016W 3945 nt3.6□□□□□ -1.83
PUP1P25043 HDA3YPR179C 1968 nt3.6□□□□□ -1.83
PUP1P25043 RGR1YLR071C 3249 nt3.59□□□□□ -1.83
PUP1P25043 SCW11YGL028C 1629 nt3.59□□□□□ -1.83
PUP1P25043 BFA1YJR053W 1725 nt3.59□□□□□ -1.83
PUP1P25043 snR60snR60 104 nt3.59□□□□□ -1.83
PUP1P25043 GPG1YGL121C 381 nt3.59□□□□□ -1.83
PUP1P25043 VAS1YGR094W 3315 nt3.59□□□□□ -1.83
PUP1P25043 SQS1YNL224C 2304 nt3.58□□□□□ -1.84
PUP1P25043 YGL052WYGL052W 306 nt3.58□□□□□ -1.84
PUP1P25043 tX(XXX)DtX(XXX)D 100 nt3.58□□□□□ -1.84
PUP1P25043 SNC2YOR327C 348 nt3.58□□□□□ -1.84
PUP1P25043 MVP1YMR004W 1536 nt3.58□□□□□ -1.84
PUP1P25043 GUP1YGL084C 1683 nt3.58□□□□□ -1.84
PUP1P25043 YDL185C-AYDL185C-A 228 nt3.57□□□□□ -1.84
PUP1P25043 GIS4YML006C 2325 nt3.57□□□□□ -1.84
PUP1P25043 PRP6YBR055C 2700 nt3.57□□□□□ -1.84
PUP1P25043 MMS22YLR320W 4365 nt3.56□□□□□ -1.84
PUP1P25043 FMP16YDR070C 282 nt3.56□□□□□ -1.84
PUP1P25043 YML037CYML037C 1023 nt3.56□□□□□ -1.84
PUP1P25043 YNL028WYNL028W 318 nt3.56□□□□□ -1.84
PUP1P25043 YNL057WYNL057W 333 nt3.56□□□□□ -1.84
PUP1P25043 YNR042WYNR042W 429 nt3.56□□□□□ -1.84
PUP1P25043 YBR225WYBR225W 2703 nt3.55□□□□□ -1.84
PUP1P25043 PRE4YFR050C 801 nt3.55□□□□□ -1.84
PUP1P25043 YBR224WYBR224W 516 nt3.55□□□□□ -1.84
PUP1P25043 PEX8YGR077C 1770 nt3.55□□□□□ -1.84
PUP1P25043 VPS35YJL154C 2835 nt3.55□□□□□ -1.84
PUP1P25043 VPH1YOR270C 2523 nt3.54□□□□□ -1.84
PUP1P25043 PDR12YPL058C 4536 nt3.54□□□□□ -1.84
PUP1P25043 FPR1YNL135C 345 nt3.54□□□□□ -1.84
PUP1P25043 KAP123YER110C 3342 nt3.54□□□□□ -1.84
PUP1P25043 EFR3YMR212C 2349 nt3.53□□□□□ -1.84
PUP1P25043 ATP8Q0080 147 nt3.53□□□□□ -1.84
PUP1P25043 YDR426CYDR426C 378 nt3.53□□□□□ -1.84
PUP1P25043 PAU2YEL049W 363 nt3.53□□□□□ -1.84
PUP1P25043 TRX1YLR043C 312 nt3.53□□□□□ -1.84
PUP1P25043 NUT2YPR168W 474 nt3.53□□□□□ -1.84
PUP1P25043 GCV2YMR189W 3105 nt3.53□□□□□ -1.84
PUP1P25043 NPR2YEL062W 1848 nt3.53□□□□□ -1.84
PUP1P25043 TMN3YER113C 2121 nt3.53□□□□□ -1.84
PUP1P25043 CRS5YOR031W 210 nt3.52□□□□□ -1.85
PUP1P25043 MGR2YPL098C 342 nt3.52□□□□□ -1.85
PUP1P25043 SNF5YBR289W 2718 nt3.52□□□□□ -1.85
PUP1P25043 SMY1YKL079W 1971 nt3.52□□□□□ -1.85
PUP1P25043 DUG2YBR281C 2637 nt3.52□□□□□ -1.85
PUP1P25043 NET1YJL076W 3570 nt3.51□□□□□ -1.85
PUP1P25043 YMR141W-AYMR141W-A 225 nt3.51□□□□□ -1.85
PUP1P25043 SPT6YGR116W 4356 nt3.51□□□□□ -1.85
PUP1P25043 YLL032CYLL032C 2478 nt3.51□□□□□ -1.85
PUP1P25043 LCD1YDR499W 2244 nt3.51□□□□□ -1.85
PUP1P25043 RTC1YOL138C 4026 nt3.51□□□□□ -1.85
PUP1P25043 SHQ1YIL104C 1524 nt3.5□□□□□ -1.85
PUP1P25043 YDR186CYDR186C 2634 nt3.5□□□□□ -1.85
PUP1P25043 YLR342W-AYLR342W-A 174 nt3.5□□□□□ -1.85
PUP1P25043 YOR333CYOR333C 417 nt3.5□□□□□ -1.85
PUP1P25043 HRD3YLR207W 2502 nt3.5□□□□□ -1.85
PUP1P25043 COS111YBR203W 2775 nt3.5□□□□□ -1.85
PUP1P25043 ECM21YBL101C 3354 nt3.49□□□□□ -1.85
PUP1P25043 tR(ACG)JtR(ACG)J 73 nt3.49□□□□□ -1.85
PUP1P25043 VPS55YJR044C 423 nt3.49□□□□□ -1.85
PUP1P25043 YLR255CYLR255C 354 nt3.49□□□□□ -1.85
PUP1P25043 CSE2YNR010W 450 nt3.49□□□□□ -1.85
PUP1P25043 GLC3YEL011W 2115 nt3.49□□□□□ -1.85
PUP1P25043 ROM1YGR070W 3468 nt3.49□□□□□ -1.85
PUP1P25043 PKH1YDR490C 2301 nt3.48□□□□□ -1.85
PUP1P25043 YEL014CYEL014C 306 nt3.48□□□□□ -1.85
PUP1P25043 YPR002C-AYPR002C-A 198 nt3.48□□□□□ -1.85
PUP1P25043 YHR080CYHR080C 4038 nt3.47□□□□□ -1.85
PUP1P25043 RIC1YLR039C 3171 nt3.47□□□□□ -1.85
PUP1P25043 RTT10YPL183C 3042 nt3.47□□□□□ -1.85
PUP1P25043 YBR184WYBR184W 1572 nt3.47□□□□□ -1.85
PUP1P25043 RAD2YGR258C 3096 nt3.47□□□□□ -1.85
PUP1P25043 RRM3YHR031C 2172 nt3.47□□□□□ -1.85
PUP1P25043 SMD1YGR074W 441 nt3.47□□□□□ -1.85
PUP1P25043 YNL338WYNL338W 159 nt3.47□□□□□ -1.85
PUP1P25043 YOR302WYOR302W 78 nt3.47□□□□□ -1.85
PUP1P25043 YPL278CYPL278C 303 nt3.47□□□□□ -1.85
PUP1P25043 CFT2YLR115W 2580 nt3.47□□□□□ -1.85
PUP1P25043 VIK1YPL253C 1944 nt3.46□□□□□ -1.85
PUP1P25043 HEF3YNL014W 3135 nt3.46□□□□□ -1.85
PUP1P25043 SEF1YBL066C 3447 nt3.46□□□□□ -1.86
PUP1P25043 UPS1YLR193C 528 nt3.45□□□□□ -1.86
PUP1P25043 SNT1YCR033W 3681 nt3.45□□□□□ -1.86
PUP1P25043 RRP12YPL012W 3687 nt3.45□□□□□ -1.86
PUP1P25043 SUL1YBR294W 2580 nt3.45□□□□□ -1.86
PUP1P25043 FIR1YER032W 2631 nt3.44□□□□□ -1.86
PUP1P25043 SDC25YLL016W 3147 nt3.44□□□□□ -1.86
PUP1P25043 DPH6YLR143W 2058 nt3.44□□□□□ -1.86
PUP1P25043 tF(GAA)QtF(GAA)Q 75 nt3.44□□□□□ -1.86
PUP1P25043 YLR120W-AYLR120W-A 102 nt3.44□□□□□ -1.86
PUP1P25043 YOR170WYOR170W 306 nt3.44□□□□□ -1.86
PUP1P25043 TAE2YPL009C 3117 nt3.44□□□□□ -1.86
PUP1P25043 MET6YER091C 2304 nt3.43□□□□□ -1.86
PUP1P25043 VPS16YPL045W 2397 nt3.43□□□□□ -1.86
PUP1P25043 YLR146W-AYLR146W-A 189 nt3.43□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 47.7 ms