Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 ALK2YBL009W 2031 nt3.22□□□□□ -1.89
TY1A-ER1P0CX71 PUF4YGL014W 2667 nt3.22□□□□□ -1.89
TY1A-ER1P0CX71 ANB1YJR047C 474 nt3.21□□□□□ -1.9
TY1A-ER1P0CX71 YLR140WYLR140W 327 nt3.21□□□□□ -1.9
TY1A-ER1P0CX71 TRS120YDR407C 3870 nt3.21□□□□□ -1.9
TY1A-ER1P0CX71 GCR1YPL075W 2358 nt3.2□□□□□ -1.9
TY1A-ER1P0CX71 KAP95YLR347C 2586 nt3.2□□□□□ -1.9
TY1A-ER1P0CX71 snR85snR85 171 nt3.2□□□□□ -1.9
TY1A-ER1P0CX71 YGL069CYGL069C 465 nt3.2□□□□□ -1.9
TY1A-ER1P0CX71 MRPL39YML009C 213 nt3.2□□□□□ -1.9
TY1A-ER1P0CX71 YNR042WYNR042W 429 nt3.2□□□□□ -1.9
TY1A-ER1P0CX71 FEX2YPL279C 1128 nt3.2□□□□□ -1.9
TY1A-ER1P0CX71 NPR3YHL023C 3441 nt3.2□□□□□ -1.9
TY1A-ER1P0CX71 SGD1YLR336C 2700 nt3.2□□□□□ -1.9
TY1A-ER1P0CX71 RLI1YDR091C 1827 nt3.19□□□□□ -1.9
TY1A-ER1P0CX71 SMC3YJL074C 3693 nt3.19□□□□□ -1.9
TY1A-ER1P0CX71 TOF2YKR010C 2316 nt3.19□□□□□ -1.9
TY1A-ER1P0CX71 YPR022CYPR022C 3402 nt3.19□□□□□ -1.9
TY1A-ER1P0CX71 YDR426CYDR426C 378 nt3.19□□□□□ -1.9
TY1A-ER1P0CX71 tV(CAC)DtV(CAC)D 73 nt3.19□□□□□ -1.9
TY1A-ER1P0CX71 tV(CAC)HtV(CAC)H 73 nt3.19□□□□□ -1.9
TY1A-ER1P0CX71 YIL020C-AYIL020C-A 339 nt3.19□□□□□ -1.9
TY1A-ER1P0CX71 SMC2YFR031C 3513 nt3.18□□□□□ -1.9
TY1A-ER1P0CX71 ORC1YML065W 2745 nt3.18□□□□□ -1.9
TY1A-ER1P0CX71 LCD1YDR499W 2244 nt3.18□□□□□ -1.9
TY1A-ER1P0CX71 YJL135WYJL135W 318 nt3.18□□□□□ -1.9
TY1A-ER1P0CX71 SPA2YLL021W 4401 nt3.18□□□□□ -1.9
TY1A-ER1P0CX71 YAK1YJL141C 2424 nt3.18□□□□□ -1.9
TY1A-ER1P0CX71 IPT1YDR072C 1584 nt3.17□□□□□ -1.9
TY1A-ER1P0CX71 YDL025W-AYDL025W-A 105 nt3.17□□□□□ -1.9
TY1A-ER1P0CX71 FMP32YFL046W 624 nt3.17□□□□□ -1.9
TY1A-ER1P0CX71 YLR120W-AYLR120W-A 102 nt3.17□□□□□ -1.9
TY1A-ER1P0CX71 YMR321CYMR321C 318 nt3.17□□□□□ -1.9
TY1A-ER1P0CX71 VMA9YCL005W-A 222 nt3.17□□□□□ -1.9
TY1A-ER1P0CX71 IKI3YLR384C 4050 nt3.17□□□□□ -1.9
TY1A-ER1P0CX71 YAT2YER024W 2772 nt3.17□□□□□ -1.9
TY1A-ER1P0CX71 BCH1YMR237W 2175 nt3.17□□□□□ -1.9
TY1A-ER1P0CX71 YKU70YMR284W 1809 nt3.16□□□□□ -1.9
TY1A-ER1P0CX71 PAN3YKL025C 2040 nt3.16□□□□□ -1.9
TY1A-ER1P0CX71 RRT15YLR162W-A 189 nt3.16□□□□□ -1.9
TY1A-ER1P0CX71 RTC6YPL183W-A 282 nt3.16□□□□□ -1.9
TY1A-ER1P0CX71 PRE4YFR050C 801 nt3.15□□□□□ -1.91
TY1A-ER1P0CX71 PSY2YNL201C 2577 nt3.15□□□□□ -1.91
TY1A-ER1P0CX71 YJL070CYJL070C 2667 nt3.15□□□□□ -1.91
TY1A-ER1P0CX71 GUP1YGL084C 1683 nt3.14□□□□□ -1.91
TY1A-ER1P0CX71 snR76snR76 109 nt3.14□□□□□ -1.91
TY1A-ER1P0CX71 TRX1YLR043C 312 nt3.14□□□□□ -1.91
TY1A-ER1P0CX71 FPR1YNL135C 345 nt3.14□□□□□ -1.91
TY1A-ER1P0CX71 NUT2YPR168W 474 nt3.14□□□□□ -1.91
TY1A-ER1P0CX71 NAB3YPL190C 2409 nt3.14□□□□□ -1.91
TY1A-ER1P0CX71 MPH1YIR002C 2982 nt3.13□□□□□ -1.91
TY1A-ER1P0CX71 RTC1YOL138C 4026 nt3.13□□□□□ -1.91
TY1A-ER1P0CX71 PFK26YIL107C 2484 nt3.13□□□□□ -1.91
TY1A-ER1P0CX71 GIS4YML006C 2325 nt3.13□□□□□ -1.91
TY1A-ER1P0CX71 FLO9YAL063C 3969 nt3.13□□□□□ -1.91
TY1A-ER1P0CX71 ERP6YGL002W 651 nt3.13□□□□□ -1.91
TY1A-ER1P0CX71 GRX8YLR364W 330 nt3.13□□□□□ -1.91
TY1A-ER1P0CX71 YBR224WYBR224W 516 nt3.13□□□□□ -1.91
TY1A-ER1P0CX71 YNR065CYNR065C 3351 nt3.13□□□□□ -1.91
TY1A-ER1P0CX71 PKH1YDR490C 2301 nt3.13□□□□□ -1.91
TY1A-ER1P0CX71 TSC11YER093C 4293 nt3.13□□□□□ -1.91
TY1A-ER1P0CX71 RSF2YJR127C 4143 nt3.12□□□□□ -1.91
TY1A-ER1P0CX71 MET5YJR137C 4329 nt3.12□□□□□ -1.91
TY1A-ER1P0CX71 KSP1YHR082C 3090 nt3.12□□□□□ -1.91
TY1A-ER1P0CX71 YAL064W-BYAL064W-B 381 nt3.12□□□□□ -1.91
TY1A-ER1P0CX71 UPS1YLR193C 528 nt3.12□□□□□ -1.91
TY1A-ER1P0CX71 PTC5YOR090C 1719 nt3.12□□□□□ -1.91
TY1A-ER1P0CX71 CHO2YGR157W 2610 nt3.12□□□□□ -1.91
TY1A-ER1P0CX71 SAK1YER129W 3429 nt3.12□□□□□ -1.91
TY1A-ER1P0CX71 COS111YBR203W 2775 nt3.12□□□□□ -1.91
TY1A-ER1P0CX71 DAN4YJR151C 3486 nt3.12□□□□□ -1.91
TY1A-ER1P0CX71 ENA5YDR038C 3276 nt3.11□□□□□ -1.91
TY1A-ER1P0CX71 ENA2YDR039C 3276 nt3.11□□□□□ -1.91
TY1A-ER1P0CX71 ENA1YDR040C 3276 nt3.11□□□□□ -1.91
TY1A-ER1P0CX71 VPH1YOR270C 2523 nt3.11□□□□□ -1.91
TY1A-ER1P0CX71 PEX8YGR077C 1770 nt3.11□□□□□ -1.91
TY1A-ER1P0CX71 YGR164WYGR164W 336 nt3.11□□□□□ -1.91
TY1A-ER1P0CX71 YLR255CYLR255C 354 nt3.11□□□□□ -1.91
TY1A-ER1P0CX71 GOT1YMR292W 417 nt3.11□□□□□ -1.91
TY1A-ER1P0CX71 LSM7YNL147W 348 nt3.11□□□□□ -1.91
TY1A-ER1P0CX71 YPR002C-AYPR002C-A 198 nt3.11□□□□□ -1.91
TY1A-ER1P0CX71 YEL025CYEL025C 3567 nt3.11□□□□□ -1.91
TY1A-ER1P0CX71 EFR3YMR212C 2349 nt3.11□□□□□ -1.91
TY1A-ER1P0CX71 PDE2YOR360C 1581 nt3.11□□□□□ -1.91
TY1A-ER1P0CX71 TMN3YER113C 2121 nt3.11□□□□□ -1.91
TY1A-ER1P0CX71 RPA135YPR010C 3612 nt3.11□□□□□ -1.91
TY1A-ER1P0CX71 CFT2YLR115W 2580 nt3.1□□□□□ -1.91
TY1A-ER1P0CX71 GLC3YEL011W 2115 nt3.1□□□□□ -1.91
TY1A-ER1P0CX71 COA4YLR218C 453 nt3.1□□□□□ -1.91
TY1A-ER1P0CX71 RGM1YMR182C 636 nt3.1□□□□□ -1.91
TY1A-ER1P0CX71 AI5_ALPHAQ0070 1893 nt3.09□□□□□ -1.91
TY1A-ER1P0CX71 CDC27YBL084C 2277 nt3.09□□□□□ -1.91
TY1A-ER1P0CX71 MIT1YEL007W 2001 nt3.09□□□□□ -1.91
TY1A-ER1P0CX71 YML037CYML037C 1023 nt3.09□□□□□ -1.91
TY1A-ER1P0CX71 YOR015WYOR015W 360 nt3.09□□□□□ -1.91
TY1A-ER1P0CX71 NUP120YKL057C 3114 nt3.09□□□□□ -1.92
TY1A-ER1P0CX71 UBP11YKR098C 2154 nt3.08□□□□□ -1.92
TY1A-ER1P0CX71 FAP7YDL166C 594 nt3.08□□□□□ -1.92
TY1A-ER1P0CX71 SSS1YDR086C 243 nt3.08□□□□□ -1.92
TY1A-ER1P0CX71 YER039C-AYER039C-A 219 nt3.08□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 104.4 ms