Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 ULI1YFR026C 510 nt4□□□□□ -1.77
CAF120P53836 RPS27AYKL156W 249 nt4□□□□□ -1.77
CAF120P53836 RPL22AYLR061W 366 nt4□□□□□ -1.77
CAF120P53836 PIN4YBL051C 2007 nt3.99□□□□□ -1.77
CAF120P53836 PMP1YCR024C-A 123 nt3.99□□□□□ -1.77
CAF120P53836 DLS1YJL065C 504 nt3.99□□□□□ -1.77
CAF120P53836 SNC2YOR327C 348 nt3.99□□□□□ -1.77
CAF120P53836 YRM1YOR172W 2361 nt3.98□□□□□ -1.77
CAF120P53836 MSH4YFL003C 2637 nt3.98□□□□□ -1.77
CAF120P53836 YDR193WYDR193W 399 nt3.98□□□□□ -1.77
CAF120P53836 BRP1YGL007W 378 nt3.98□□□□□ -1.77
CAF120P53836 CAF130YGR134W 3369 nt3.98□□□□□ -1.77
CAF120P53836 SEG1YMR086W 2883 nt3.98□□□□□ -1.77
CAF120P53836 SSH1YBR283C 1473 nt3.98□□□□□ -1.77
CAF120P53836 ECM22YLR228C 2445 nt3.97□□□□□ -1.77
CAF120P53836 ERB1YMR049C 2424 nt3.97□□□□□ -1.77
CAF120P53836 TRK1YJL129C 3708 nt3.97□□□□□ -1.77
CAF120P53836 PTA1YAL043C 2358 nt3.97□□□□□ -1.77
CAF120P53836 YJL222W-BYJL222W-B 138 nt3.97□□□□□ -1.77
CAF120P53836 HHF1YBR009C 312 nt3.97□□□□□ -1.77
CAF120P53836 YBR141W-AYBR141W-A 96 nt3.97□□□□□ -1.77
CAF120P53836 TCB3YML072C 4638 nt3.97□□□□□ -1.77
CAF120P53836 TAF6YGL112C 1551 nt3.97□□□□□ -1.77
CAF120P53836 SPT23YKL020C 3249 nt3.97□□□□□ -1.77
CAF120P53836 REB1YBR049C 2433 nt3.96□□□□□ -1.77
CAF120P53836 YGR027W-BYGR027W-B 5268 nt3.96□□□□□ -1.77
CAF120P53836 YLR227W-BYLR227W-B 5268 nt3.96□□□□□ -1.77
CAF120P53836 YPR158C-DYPR158C-D 5268 nt3.96□□□□□ -1.77
CAF120P53836 SNF2YOR290C 5112 nt3.96□□□□□ -1.78
CAF120P53836 RAD4YER162C 2265 nt3.96□□□□□ -1.78
CAF120P53836 VIP1YLR410W 3441 nt3.96□□□□□ -1.78
CAF120P53836 snR74snR74 88 nt3.96□□□□□ -1.78
CAF120P53836 GEP4YHR100C 558 nt3.96□□□□□ -1.78
CAF120P53836 GAC1YOR178C 2382 nt3.96□□□□□ -1.78
CAF120P53836 CHL1YPL008W 2586 nt3.96□□□□□ -1.78
CAF120P53836 ULS1YOR191W 4860 nt3.95□□□□□ -1.78
CAF120P53836 YGL041C-BYGL041C-B 183 nt3.95□□□□□ -1.78
CAF120P53836 PIM1YBL022C 3402 nt3.95□□□□□ -1.78
CAF120P53836 YDR341CYDR341C 1824 nt3.95□□□□□ -1.78
CAF120P53836 YIL166CYIL166C 1629 nt3.94□□□□□ -1.78
CAF120P53836 GAL11YOL051W 3246 nt3.94□□□□□ -1.78
CAF120P53836 JJJ2YJL162C 1752 nt3.94□□□□□ -1.78
CAF120P53836 MIS1YBR084W 2928 nt3.94□□□□□ -1.78
CAF120P53836 tS(GCU)Q1tS(GCU)Q1 86 nt3.93□□□□□ -1.78
CAF120P53836 RPS18BYML026C 441 nt3.93□□□□□ -1.78
CAF120P53836 YDR089WYDR089W 2610 nt3.93□□□□□ -1.78
CAF120P53836 MSS11YMR164C 2277 nt3.93□□□□□ -1.78
CAF120P53836 SPB1YCL054W 2526 nt3.93□□□□□ -1.78
CAF120P53836 YNR065CYNR065C 3351 nt3.93□□□□□ -1.78
CAF120P53836 CDC27YBL084C 2277 nt3.92□□□□□ -1.78
CAF120P53836 SRB4YER022W 2064 nt3.92□□□□□ -1.78
CAF120P53836 VID28YIL017C 2766 nt3.91□□□□□ -1.78
CAF120P53836 TFB1YDR311W 1929 nt3.91□□□□□ -1.78
CAF120P53836 PEX5YDR244W 1839 nt3.91□□□□□ -1.78
CAF120P53836 YGL239CYGL239C 315 nt3.91□□□□□ -1.78
CAF120P53836 SOD1YJR104C 465 nt3.91□□□□□ -1.78
CAF120P53836 YLR282CYLR282C 342 nt3.91□□□□□ -1.78
CAF120P53836 LCB5YLR260W 2064 nt3.91□□□□□ -1.78
CAF120P53836 FLO10YKR102W 3510 nt3.9□□□□□ -1.78
CAF120P53836 GYP7YDL234C 2241 nt3.9□□□□□ -1.78
CAF120P53836 KEL2YGR238C 2649 nt3.9□□□□□ -1.79
CAF120P53836 YER053C-AYER053C-A 114 nt3.9□□□□□ -1.79
CAF120P53836 RPL38YLR325C 237 nt3.9□□□□□ -1.79
CAF120P53836 YML116W-AYML116W-A 303 nt3.9□□□□□ -1.79
CAF120P53836 YOR073W-AYOR073W-A 234 nt3.9□□□□□ -1.79
CAF120P53836 PUF6YDR496C 1971 nt3.9□□□□□ -1.79
CAF120P53836 VPS54YDR027C 2670 nt3.9□□□□□ -1.79
CAF120P53836 MUK1YPL070W 1839 nt3.9□□□□□ -1.79
CAF120P53836 GRS2YPR081C 1857 nt3.9□□□□□ -1.79
CAF120P53836 ALY1YKR021W 2748 nt3.89□□□□□ -1.79
CAF120P53836 YDL041WYDL041W 354 nt3.89□□□□□ -1.79
CAF120P53836 TSA2YDR453C 591 nt3.89□□□□□ -1.79
CAF120P53836 YIL174WYIL174W 228 nt3.89□□□□□ -1.79
CAF120P53836 YJL222W-AYJL222W-A 228 nt3.89□□□□□ -1.79
CAF120P53836 GIS2YNL255C 462 nt3.89□□□□□ -1.79
CAF120P53836 ISU1YPL135W 498 nt3.89□□□□□ -1.79
CAF120P53836 YPR053CYPR053C 456 nt3.89□□□□□ -1.79
CAF120P53836 MNL1YHR204W 2391 nt3.89□□□□□ -1.79
CAF120P53836 IPT1YDR072C 1584 nt3.89□□□□□ -1.79
CAF120P53836 YOL057WYOL057W 2136 nt3.88□□□□□ -1.79
CAF120P53836 NCE101YJL205C 162 nt3.88□□□□□ -1.79
CAF120P53836 YPR003CYPR003C 2265 nt3.88□□□□□ -1.79
CAF120P53836 USA1YML029W 2517 nt3.88□□□□□ -1.79
CAF120P53836 CDC24YAL041W 2565 nt3.88□□□□□ -1.79
CAF120P53836 SPT16YGL207W 3108 nt3.88□□□□□ -1.79
CAF120P53836 SSY1YDR160W 2559 nt3.87□□□□□ -1.79
CAF120P53836 SRO7YPR032W 3102 nt3.87□□□□□ -1.79
CAF120P53836 ATG2YNL242W 4779 nt3.87□□□□□ -1.79
CAF120P53836 RBK1YCR036W 1002 nt3.87□□□□□ -1.79
CAF120P53836 SSS1YDR086C 243 nt3.87□□□□□ -1.79
CAF120P53836 YDR286CYDR286C 345 nt3.87□□□□□ -1.79
CAF120P53836 YCF1YDR135C 4548 nt3.86□□□□□ -1.79
CAF120P53836 PHM6YDR281C 315 nt3.86□□□□□ -1.79
CAF120P53836 ASC1YMR116C 960 nt3.86□□□□□ -1.79
CAF120P53836 ACM1YPL267W 630 nt3.86□□□□□ -1.79
CAF120P53836 ARK1YNL020C 1917 nt3.85□□□□□ -1.79
CAF120P53836 CPA2YJR109C 3357 nt3.85□□□□□ -1.79
CAF120P53836 ERP6YGL002W 651 nt3.85□□□□□ -1.79
CAF120P53836 YOR102WYOR102W 351 nt3.85□□□□□ -1.79
CAF120P53836 ACE2YLR131C 2313 nt3.85□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 59.8 ms