Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 BUD19YJL188C 309 nt1.76□□□□□ -2.13
UFD1P53044 YNL146C-AYNL146C-A 195 nt1.76□□□□□ -2.13
UFD1P53044 MYO2YOR326W 4725 nt1.76□□□□□ -2.13
UFD1P53044 UBP1YDL122W 2430 nt1.76□□□□□ -2.13
UFD1P53044 RRP6YOR001W 2202 nt1.75□□□□□ -2.13
UFD1P53044 AHC2YCR082W 387 nt1.75□□□□□ -2.13
UFD1P53044 SDC1YDR469W 528 nt1.75□□□□□ -2.13
UFD1P53044 IRC4YDR540C 540 nt1.75□□□□□ -2.13
UFD1P53044 YIL058WYIL058W 285 nt1.75□□□□□ -2.13
UFD1P53044 YLR252WYLR252W 306 nt1.75□□□□□ -2.13
UFD1P53044 YLR379WYLR379W 375 nt1.75□□□□□ -2.13
UFD1P53044 YPL039WYPL039W 951 nt1.75□□□□□ -2.13
UFD1P53044 YPL080CYPL080C 327 nt1.75□□□□□ -2.13
UFD1P53044 YPR172WYPR172W 603 nt1.75□□□□□ -2.13
UFD1P53044 DFG16YOR030W 1860 nt1.75□□□□□ -2.13
UFD1P53044 UBP11YKR098C 2154 nt1.75□□□□□ -2.13
UFD1P53044 YEL043WYEL043W 2871 nt1.74□□□□□ -2.13
UFD1P53044 BRP1YGL007W 378 nt1.74□□□□□ -2.13
UFD1P53044 PRM8YGL053W 714 nt1.74□□□□□ -2.13
UFD1P53044 COX13YGL191W 390 nt1.74□□□□□ -2.13
UFD1P53044 EMC4YGL231C 573 nt1.74□□□□□ -2.13
UFD1P53044 SPO13YHR014W 876 nt1.74□□□□□ -2.13
UFD1P53044 YHR210CYHR210C 1026 nt1.74□□□□□ -2.13
UFD1P53044 PEP8YJL053W 1140 nt1.74□□□□□ -2.13
UFD1P53044 RAM2YKL019W 951 nt1.74□□□□□ -2.13
UFD1P53044 SHE2YKL130C 741 nt1.74□□□□□ -2.13
UFD1P53044 UBX4YMR067C 1251 nt1.74□□□□□ -2.13
UFD1P53044 ICY1YMR195W 384 nt1.74□□□□□ -2.13
UFD1P53044 TOA1YOR194C 861 nt1.74□□□□□ -2.13
UFD1P53044 YPR153WYPR153W 423 nt1.74□□□□□ -2.13
UFD1P53044 SSY1YDR160W 2559 nt1.74□□□□□ -2.13
UFD1P53044 YDR210W-AYDR210W-A 1317 nt1.73□□□□□ -2.13
UFD1P53044 YOR343W-AYOR343W-A 1317 nt1.73□□□□□ -2.13
UFD1P53044 YDL016CYDL016C 303 nt1.73□□□□□ -2.13
UFD1P53044 TMA7YLR262C-A 195 nt1.73□□□□□ -2.13
UFD1P53044 IST2YBR086C 2841 nt1.73□□□□□ -2.13
UFD1P53044 REV1YOR346W 2958 nt1.72□□□□□ -2.13
UFD1P53044 GYP5YPL249C 2685 nt1.72□□□□□ -2.13
UFD1P53044 DPB11YJL090C 2295 nt1.72□□□□□ -2.13
UFD1P53044 RNH70YGR276C 1662 nt1.72□□□□□ -2.13
UFD1P53044 snR84snR84 550 nt1.72□□□□□ -2.13
UFD1P53044 YGL014C-AYGL014C-A 162 nt1.72□□□□□ -2.13
UFD1P53044 tT(UGU)HtT(UGU)H 72 nt1.72□□□□□ -2.13
UFD1P53044 YLR271WYLR271W 825 nt1.72□□□□□ -2.13
UFD1P53044 YHC1YLR298C 696 nt1.72□□□□□ -2.13
UFD1P53044 ATP15YPL271W 189 nt1.72□□□□□ -2.13
UFD1P53044 TRS20YBR254C 528 nt1.72□□□□□ -2.13
UFD1P53044 YOR093CYOR093C 4947 nt1.72□□□□□ -2.13
UFD1P53044 PRK1YIL095W 2433 nt1.71□□□□□ -2.14
UFD1P53044 FAB1YFR019W 6837 nt1.71□□□□□ -2.14
UFD1P53044 CHC1YGL206C 4962 nt1.71□□□□□ -2.14
UFD1P53044 HNT1YDL125C 477 nt1.71□□□□□ -2.14
UFD1P53044 FMP16YDR070C 282 nt1.71□□□□□ -2.14
UFD1P53044 YER172C-AYER172C-A 381 nt1.71□□□□□ -2.14
UFD1P53044 YER175W-AYER175W-A 165 nt1.71□□□□□ -2.14
UFD1P53044 YFR056CYFR056C 369 nt1.71□□□□□ -2.14
UFD1P53044 EMP24YGL200C 612 nt1.71□□□□□ -2.14
UFD1P53044 LAG1YHL003C 1236 nt1.71□□□□□ -2.14
UFD1P53044 TPM2YIL138C 486 nt1.71□□□□□ -2.14
UFD1P53044 YJL127C-BYJL127C-B 159 nt1.71□□□□□ -2.14
UFD1P53044 RLP24YLR009W 600 nt1.71□□□□□ -2.14
UFD1P53044 YLR031WYLR031W 561 nt1.71□□□□□ -2.14
UFD1P53044 AFB1YLR040C 675 nt1.71□□□□□ -2.14
UFD1P53044 SIP18YMR175W 240 nt1.71□□□□□ -2.14
UFD1P53044 MGR1YCL044C 1254 nt1.71□□□□□ -2.14
UFD1P53044 SET2YJL168C 2202 nt1.71□□□□□ -2.14
UFD1P53044 PTC5YOR090C 1719 nt1.71□□□□□ -2.14
UFD1P53044 SIR4YDR227W 4077 nt1.71□□□□□ -2.14
UFD1P53044 IRC20YLR247C 4671 nt1.7□□□□□ -2.14
UFD1P53044 SSQ1YLR369W 1974 nt1.7□□□□□ -2.14
UFD1P53044 YDL025W-AYDL025W-A 105 nt1.7□□□□□ -2.14
UFD1P53044 CRD1YDL142C 852 nt1.7□□□□□ -2.14
UFD1P53044 YDR194W-AYDR194W-A 153 nt1.7□□□□□ -2.14
UFD1P53044 YDR220CYDR220C 294 nt1.7□□□□□ -2.14
UFD1P53044 MSL5YLR116W 1431 nt1.7□□□□□ -2.14
UFD1P53044 RPL37AYLR185W 267 nt1.7□□□□□ -2.14
UFD1P53044 RPS7BYNL096C 573 nt1.7□□□□□ -2.14
UFD1P53044 RCN2YOR220W 798 nt1.7□□□□□ -2.14
UFD1P53044 MEI5YPL121C 669 nt1.7□□□□□ -2.14
UFD1P53044 BRO1YPL084W 2535 nt1.7□□□□□ -2.14
UFD1P53044 LHS1YKL073W 2646 nt1.7□□□□□ -2.14
UFD1P53044 RNR4YGR180C 1038 nt1.69□□□□□ -2.14
UFD1P53044 SNC1YAL030W 354 nt1.69□□□□□ -2.14
UFD1P53044 ILM1YJR118C 612 nt1.69□□□□□ -2.14
UFD1P53044 YJR141WYJR141W 1044 nt1.69□□□□□ -2.14
UFD1P53044 BER1YLR412W 825 nt1.69□□□□□ -2.14
UFD1P53044 YLR458WYLR458W 381 nt1.69□□□□□ -2.14
UFD1P53044 VTI1YMR197C 654 nt1.69□□□□□ -2.14
UFD1P53044 URA10YMR271C 684 nt1.69□□□□□ -2.14
UFD1P53044 YBR071WYBR071W 636 nt1.69□□□□□ -2.14
UFD1P53044 YCL023CYCL023C 348 nt1.69□□□□□ -2.14
UFD1P53044 NCL1YBL024W 2055 nt1.69□□□□□ -2.14
UFD1P53044 CDC60YPL160W 3273 nt1.69□□□□□ -2.14
UFD1P53044 CDC50YCR094W 1176 nt1.68□□□□□ -2.14
UFD1P53044 ATG9YDL149W 2994 nt1.68□□□□□ -2.14
UFD1P53044 CIC1YHR052W 1131 nt1.68□□□□□ -2.14
UFD1P53044 RPL40AYIL148W 387 nt1.68□□□□□ -2.14
UFD1P53044 APQ13YJL075C 417 nt1.68□□□□□ -2.14
UFD1P53044 PDR8YLR266C 2106 nt1.68□□□□□ -2.14
UFD1P53044 YMR247W-AYMR247W-A 144 nt1.68□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 40.9 ms