RNA–Protein interactions for RNA: YBR254C

TRS20, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS20, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS20YBR254C MTC1P47018 478 aaKnown RBP14.69□□□□□ -0.06
TRS20YBR254C DRS1P32892 752 aaKnown RBP13.92□□□□□ -0.18
TRS20YBR254C FAP1P53971 965 aa13.01□□□□□ -0.33
TRS20YBR254C PRI1P10363 409 aa12.28□□□□□ -0.44
TRS20YBR254C PRY3P47033 881 aa12.23□□□□□ -0.45
TRS20YBR254C AAD16Q02895 342 aa12.17□□□□□ -0.46
TRS20YBR254C DIP2Q12220 943 aaPredicted RBP12.13□□□□□ -0.47
TRS20YBR254C ISW2Q08773 1120 aa12.11□□□□□ -0.47
TRS20YBR254C RPG1P38249 964 aaKnown RBP12.01□□□□□ -0.49
TRS20YBR254C AVT3P36062 692 aa11.74□□□□□ -0.53
TRS20YBR254C RSE1Q04693 1361 aaKnown RBP11.66□□□□□ -0.54
TRS20YBR254C BFR2Q06631 534 aaKnown RBP11.65□□□□□ -0.54
TRS20YBR254C TSR3Q12094 313 aaKnown RBP11.64□□□□□ -0.55
TRS20YBR254C YCK3P39962 524 aa11.58□□□□□ -0.56
TRS20YBR254C HAA1Q12753 694 aaKnown RBP11.45□□□□□ -0.58
TRS20YBR254C RPL17AP05740 184 aaKnown RBP11.3□□□□□ -0.6
TRS20YBR254C RPL17BP46990 184 aaKnown RBP11.3□□□□□ -0.6
TRS20YBR254C REB1P21538 810 aa11.21□□□□□ -0.61
TRS20YBR254C MRPL32P25348 183 aa11.15□□□□□ -0.62
TRS20YBR254C SPT21P35209 758 aa10.82□□□□□ -0.68
TRS20YBR254C YKR023WP36119 530 aaKnown RBP10.67□□□□□ -0.7
TRS20YBR254C CDC27P38042 758 aa10.66□□□□□ -0.7
TRS20YBR254C YGL015CP33199 130 aa10.63□□□□□ -0.71
TRS20YBR254C RIM101P33400 625 aa10.48□□□□□ -0.73
TRS20YBR254C HOP09932 586 aa10.46□□□□□ -0.73
TRS20YBR254C TFC8Q12308 588 aa10.45□□□□□ -0.74
TRS20YBR254C DCD1P06773 312 aa10.43□□□□□ -0.74
TRS20YBR254C TFA1P36100 482 aa10.37□□□□□ -0.75
TRS20YBR254C MAP2P38174 421 aaKnown RBP10.3□□□□□ -0.76
TRS20YBR254C UBP10P53874 792 aaPredicted RBP10.28□□□□□ -0.76
TRS20YBR254C OXP1P28273 1286 aa10.16□□□□□ -0.78
TRS20YBR254C BCH2P36122 765 aa10.12□□□□□ -0.79
TRS20YBR254C SCY1P53009 804 aa10.12□□□□□ -0.79
TRS20YBR254C YIL055CP40523 627 aaKnown RBP9.98□□□□□ -0.81
TRS20YBR254C SLX5P32828 619 aaKnown RBP9.96□□□□□ -0.82
TRS20YBR254C PTP3P40048 928 aa9.96□□□□□ -0.82
TRS20YBR254C YAH1Q12184 172 aaKnown RBP9.89□□□□□ -0.83
TRS20YBR254C EPS1P40557 701 aa9.87□□□□□ -0.83
TRS20YBR254C TIF4632P39936 914 aaKnown RBP9.86□□□□□ -0.83
TRS20YBR254C BDF1P35817 686 aa9.83□□□□□ -0.84
TRS20YBR254C RSM7P47150 247 aa9.83□□□□□ -0.84
TRS20YBR254C TGL3P40308 642 aa9.81□□□□□ -0.84
TRS20YBR254C AI2P03876 854 aa9.73□□□□□ -0.85
TRS20YBR254C YLR271WQ06152 274 aa9.73□□□□□ -0.85
TRS20YBR254C BBC1P47068 1157 aa9.71□□□□□ -0.86
TRS20YBR254C BUD31P25337 157 aaPredicted RBP9.66□□□□□ -0.86
TRS20YBR254C SSP1P38871 571 aa9.64□□□□□ -0.87
TRS20YBR254C PSD2P53037 1138 aaKnown RBP9.54□□□□□ -0.88
TRS20YBR254C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.53□□□□□ -0.88not detected
TRS20YBR254C UBP9P39967 754 aa9.44□□□□□ -0.9
TRS20YBR254C MST1P07236 462 aa9.43□□□□□ -0.9
TRS20YBR254C NSR1P27476 414 aaKnown RBP RIP-Chip data9.42□□□□□ -0.9 RIP-Chip
TRS20YBR254C YOR238WQ08634 303 aa9.42□□□□□ -0.9
TRS20YBR254C MRM1P25270 412 aa9.4□□□□□ -0.9
TRS20YBR254C CST9Q06032 482 aa9.4□□□□□ -0.9
TRS20YBR254C YAP5P40574 245 aa9.37□□□□□ -0.91
TRS20YBR254C MGA2P40578 1113 aa9.37□□□□□ -0.91
TRS20YBR254C YBL029C-AQ3E756 94 aa9.27□□□□□ -0.93
TRS20YBR254C PIB1Q06651 286 aa9.23□□□□□ -0.93
TRS20YBR254C SIS1P25294 352 aaKnown RBP9.21□□□□□ -0.94
TRS20YBR254C RTG3P38165 486 aa9.2□□□□□ -0.94
TRS20YBR254C VPS29P38759 282 aa9.2□□□□□ -0.94
TRS20YBR254C VNX1P42839 908 aa9.18□□□□□ -0.94
TRS20YBR254C WSC3Q12215 556 aa9.17□□□□□ -0.94
TRS20YBR254C RCR1P38212 213 aa9.16□□□□□ -0.94
TRS20YBR254C GTT3P39996 337 aa9.15□□□□□ -0.94
TRS20YBR254C YMR1P47147 688 aaKnown RBP RIP-Chip data9.14□□□□□ -0.95not detected
TRS20YBR254C DBP1P24784 617 aaKnown RBP9.12□□□□□ -0.95
TRS20YBR254C YFR006WP43590 535 aa9.11□□□□□ -0.95
TRS20YBR254C STS1P38637 319 aa9.09□□□□□ -0.95
TRS20YBR254C SPP1Q03012 353 aa9.08□□□□□ -0.96
TRS20YBR254C TIF11P38912 153 aaKnown RBP9.02□□□□□ -0.97
TRS20YBR254C VMA1P17255 1071 aaKnown RBP8.99□□□□□ -0.97
TRS20YBR254C SET4P42948 560 aa8.95□□□□□ -0.98
TRS20YBR254C YOL036WQ08206 761 aa8.95□□□□□ -0.98
TRS20YBR254C ULI1P43604 169 aa8.94□□□□□ -0.98
TRS20YBR254C RAM2P29703 316 aa8.93□□□□□ -0.98
TRS20YBR254C MSB4Q12317 492 aa8.93□□□□□ -0.98
TRS20YBR254C SAM3Q08986 587 aa8.92□□□□□ -0.98
TRS20YBR254C IOC2Q12072 812 aa8.91□□□□□ -0.98
TRS20YBR254C LDB19Q12502 818 aa8.89□□□□□ -0.99
TRS20YBR254C EAP1P36041 632 aaKnown RBP8.87□□□□□ -0.99
TRS20YBR254C TRP5P00931 707 aaKnown RBP8.85□□□□□ -0.99
TRS20YBR254C MAK11P20484 414 aaKnown RBP8.85□□□□□ -0.99
TRS20YBR254C FKH1P40466 484 aa8.85□□□□□ -0.99
TRS20YBR254C AIR2Q12476 344 aaKnown RBP8.85□□□□□ -0.99
TRS20YBR254C GYP5Q12344 894 aa8.81□□□□□ -1
TRS20YBR254C MIF2P35201 549 aa8.79□□□□□ -1
TRS20YBR254C EDS1P38073 919 aa8.77□□□□□ -1.01
TRS20YBR254C RTG1P32607 177 aa8.75□□□□□ -1.01
TRS20YBR254C DCW1P36091 449 aa8.75□□□□□ -1.01
TRS20YBR254C COQ8P27697 501 aa8.74□□□□□ -1.01
TRS20YBR254C ABP1P15891 592 aaKnown RBP8.73□□□□□ -1.01
TRS20YBR254C YJL171CP46992 396 aa8.73□□□□□ -1.01
TRS20YBR254C PTC3P34221 468 aaKnown RBP8.72□□□□□ -1.01
TRS20YBR254C YNL035CP53962 389 aaKnown RBP8.72□□□□□ -1.01
TRS20YBR254C HTA1P04911 132 aaKnown RBP8.71□□□□□ -1.02
TRS20YBR254C HTA2P04912 132 aa8.71□□□□□ -1.02
TRS20YBR254C GRE2Q12068 342 aaKnown RBP8.7□□□□□ -1.02
TRS20YBR254C NCR1Q12200 1170 aa8.69□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms