Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
SYNPO2Q9UMS6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SYNPO2Q9UMS6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.79■■■□□ 2.52
SYNPO2Q9UMS6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
SYNPO2Q9UMS6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SYNPO2Q9UMS6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
SYNPO2Q9UMS6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
SYNPO2Q9UMS6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.76■■■□□ 2.51
SYNPO2Q9UMS6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.76■■■□□ 2.51
SYNPO2Q9UMS6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.76■■■□□ 2.51
SYNPO2Q9UMS6 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SYNPO2Q9UMS6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.75■■■□□ 2.51
SYNPO2Q9UMS6 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SYNPO2Q9UMS6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SYNPO2Q9UMS6 LINC01971-201ENST00000617888 1048 ntBASIC30.74■■■□□ 2.51
SYNPO2Q9UMS6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
SYNPO2Q9UMS6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.73■■■□□ 2.51
SYNPO2Q9UMS6 AC010864.1-201ENST00000609407 1511 ntBASIC30.73■■■□□ 2.51
SYNPO2Q9UMS6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.72■■■□□ 2.51
SYNPO2Q9UMS6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
SYNPO2Q9UMS6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.71■■■□□ 2.51
SYNPO2Q9UMS6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC30.71■■■□□ 2.51
SYNPO2Q9UMS6 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SYNPO2Q9UMS6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
SYNPO2Q9UMS6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.7■■■□□ 2.51
SYNPO2Q9UMS6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.69■■■□□ 2.5
SYNPO2Q9UMS6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
SYNPO2Q9UMS6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.69■■■□□ 2.5
SYNPO2Q9UMS6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
SYNPO2Q9UMS6 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.69■■■□□ 2.5
SYNPO2Q9UMS6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
SYNPO2Q9UMS6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SYNPO2Q9UMS6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SYNPO2Q9UMS6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SYNPO2Q9UMS6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.65■■■□□ 2.5
SYNPO2Q9UMS6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
SYNPO2Q9UMS6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.64■■■□□ 2.5
SYNPO2Q9UMS6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
SYNPO2Q9UMS6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SYNPO2Q9UMS6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
SYNPO2Q9UMS6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.62■■■□□ 2.49
SYNPO2Q9UMS6 HLA-V-202ENST00000446817 847 ntBASIC30.62■■■□□ 2.49
SYNPO2Q9UMS6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.62■■■□□ 2.49
SYNPO2Q9UMS6 DUX4L11-201ENST00000611504 1267 ntBASIC30.61■■■□□ 2.49
SYNPO2Q9UMS6 DUX4L12-201ENST00000614593 1267 ntBASIC30.61■■■□□ 2.49
SYNPO2Q9UMS6 DUX4L14-201ENST00000621227 1267 ntBASIC30.61■■■□□ 2.49
SYNPO2Q9UMS6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SYNPO2Q9UMS6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SYNPO2Q9UMS6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.59■■■□□ 2.49
SYNPO2Q9UMS6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.59■■■□□ 2.49
SYNPO2Q9UMS6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SYNPO2Q9UMS6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.58■■■□□ 2.49
SYNPO2Q9UMS6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.58■■■□□ 2.49
SYNPO2Q9UMS6 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.58■■■□□ 2.49
SYNPO2Q9UMS6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.57■■■□□ 2.48
SYNPO2Q9UMS6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SYNPO2Q9UMS6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.56■■■□□ 2.48
SYNPO2Q9UMS6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SYNPO2Q9UMS6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
SYNPO2Q9UMS6 MIR3648-2-201ENST00000581792 180 ntBASIC30.54■■■□□ 2.48
SYNPO2Q9UMS6 MIR3648-1-201ENST00000615959 180 ntBASIC30.54■■■□□ 2.48
SYNPO2Q9UMS6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SYNPO2Q9UMS6 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC30.52■■■□□ 2.48
SYNPO2Q9UMS6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SYNPO2Q9UMS6 MIR639-201ENST00000384974 98 ntBASIC30.52■■■□□ 2.48
SYNPO2Q9UMS6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SYNPO2Q9UMS6 AL135925.1-201ENST00000605920 1701 ntBASIC30.52■■■□□ 2.48
SYNPO2Q9UMS6 LINC00273-201ENST00000539813 1452 ntBASIC30.51■■■□□ 2.48
SYNPO2Q9UMS6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
SYNPO2Q9UMS6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.51■■■□□ 2.47
SYNPO2Q9UMS6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SYNPO2Q9UMS6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.5■■■□□ 2.47
SYNPO2Q9UMS6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.5■■■□□ 2.47
SYNPO2Q9UMS6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.5■■■□□ 2.47
SYNPO2Q9UMS6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SYNPO2Q9UMS6 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
SYNPO2Q9UMS6 CR559946.2-201ENST00000623684 991 ntBASIC30.49■■■□□ 2.47
SYNPO2Q9UMS6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.49■■■□□ 2.47
SYNPO2Q9UMS6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
SYNPO2Q9UMS6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.48■■■□□ 2.47
SYNPO2Q9UMS6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
SYNPO2Q9UMS6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.47■■■□□ 2.47
SYNPO2Q9UMS6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.47■■■□□ 2.47
SYNPO2Q9UMS6 DUX4L13-201ENST00000554103 1267 ntBASIC30.46■■■□□ 2.47
SYNPO2Q9UMS6 DUX4L15-201ENST00000611059 1267 ntBASIC30.46■■■□□ 2.47
SYNPO2Q9UMS6 DUX4L23-201ENST00000615195 1269 ntBASIC30.46■■■□□ 2.47
SYNPO2Q9UMS6 DUX4L24-201ENST00000617576 1269 ntBASIC30.46■■■□□ 2.47
SYNPO2Q9UMS6 DUX4L22-201ENST00000618238 1269 ntBASIC30.46■■■□□ 2.47
SYNPO2Q9UMS6 DUX4L20-201ENST00000619712 1269 ntBASIC30.46■■■□□ 2.47
SYNPO2Q9UMS6 DUX4L21-201ENST00000622058 1269 ntBASIC30.46■■■□□ 2.47
SYNPO2Q9UMS6 DUX4L10-201ENST00000622460 1267 ntBASIC30.46■■■□□ 2.47
SYNPO2Q9UMS6 DUX4L25-201ENST00000624915 1269 ntBASIC30.46■■■□□ 2.47
SYNPO2Q9UMS6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SYNPO2Q9UMS6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.45■■■□□ 2.47
SYNPO2Q9UMS6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.47
SYNPO2Q9UMS6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.45■■■□□ 2.47
SYNPO2Q9UMS6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.45■■■□□ 2.47
SYNPO2Q9UMS6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.44■■■□□ 2.46
SYNPO2Q9UMS6 MIR4449-201ENST00000578365 66 ntBASIC30.44■■■□□ 2.46
SYNPO2Q9UMS6 AC016575.1-201ENST00000607026 382 ntBASIC30.44■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms