Protein–RNA interactions for Protein: Q9NPG3

UBN1, Ubinuclein-1, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBN1Q9NPG3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
UBN1Q9NPG3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
UBN1Q9NPG3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.71■■■□□ 2.19
UBN1Q9NPG3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
UBN1Q9NPG3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
UBN1Q9NPG3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
UBN1Q9NPG3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.7■■■□□ 2.18
UBN1Q9NPG3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.18
UBN1Q9NPG3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.7■■■□□ 2.18
UBN1Q9NPG3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
UBN1Q9NPG3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.68■■■□□ 2.18
UBN1Q9NPG3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
UBN1Q9NPG3 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
UBN1Q9NPG3 AL161658.1-201ENST00000623641 1967 ntBASIC28.68■■■□□ 2.18
UBN1Q9NPG3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.68■■■□□ 2.18
UBN1Q9NPG3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
UBN1Q9NPG3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
UBN1Q9NPG3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.67■■■□□ 2.18
UBN1Q9NPG3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
UBN1Q9NPG3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
UBN1Q9NPG3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
UBN1Q9NPG3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
UBN1Q9NPG3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
UBN1Q9NPG3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.65■■■□□ 2.18
UBN1Q9NPG3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.65■■■□□ 2.18
UBN1Q9NPG3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC28.65■■■□□ 2.18
UBN1Q9NPG3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
UBN1Q9NPG3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
UBN1Q9NPG3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.64■■■□□ 2.18
UBN1Q9NPG3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
UBN1Q9NPG3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.63■■■□□ 2.17
UBN1Q9NPG3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.62■■■□□ 2.17
UBN1Q9NPG3 LINC01971-201ENST00000617888 1048 ntBASIC28.62■■■□□ 2.17
UBN1Q9NPG3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
UBN1Q9NPG3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
UBN1Q9NPG3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
UBN1Q9NPG3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
UBN1Q9NPG3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
UBN1Q9NPG3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.61■■■□□ 2.17
UBN1Q9NPG3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
UBN1Q9NPG3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
UBN1Q9NPG3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.59■■■□□ 2.17
UBN1Q9NPG3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
UBN1Q9NPG3 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
UBN1Q9NPG3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.59■■■□□ 2.17
UBN1Q9NPG3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.58■■■□□ 2.17
UBN1Q9NPG3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
UBN1Q9NPG3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
UBN1Q9NPG3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.57■■■□□ 2.16
UBN1Q9NPG3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
UBN1Q9NPG3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.55■■■□□ 2.16
UBN1Q9NPG3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
UBN1Q9NPG3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.55■■■□□ 2.16
UBN1Q9NPG3 DUX4L11-201ENST00000611504 1267 ntBASIC28.54■■■□□ 2.16
UBN1Q9NPG3 DUX4L12-201ENST00000614593 1267 ntBASIC28.54■■■□□ 2.16
UBN1Q9NPG3 DUX4L14-201ENST00000621227 1267 ntBASIC28.54■■■□□ 2.16
UBN1Q9NPG3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
UBN1Q9NPG3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
UBN1Q9NPG3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC28.52■■■□□ 2.16
UBN1Q9NPG3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.52■■■□□ 2.16
UBN1Q9NPG3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.52■■■□□ 2.16
UBN1Q9NPG3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
UBN1Q9NPG3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
UBN1Q9NPG3 MIR3648-2-201ENST00000581792 180 ntBASIC28.51■■■□□ 2.15
UBN1Q9NPG3 MIR3648-1-201ENST00000615959 180 ntBASIC28.51■■■□□ 2.15
UBN1Q9NPG3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
UBN1Q9NPG3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.5■■■□□ 2.15
UBN1Q9NPG3 MIR639-201ENST00000384974 98 ntBASIC28.49■■■□□ 2.15
UBN1Q9NPG3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.49■■■□□ 2.15
UBN1Q9NPG3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.48■■■□□ 2.15
UBN1Q9NPG3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.48■■■□□ 2.15
UBN1Q9NPG3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
UBN1Q9NPG3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.47■■■□□ 2.15
UBN1Q9NPG3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
UBN1Q9NPG3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
UBN1Q9NPG3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.46■■■□□ 2.15
UBN1Q9NPG3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
UBN1Q9NPG3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
UBN1Q9NPG3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.45■■■□□ 2.14
UBN1Q9NPG3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
UBN1Q9NPG3 AC010864.1-201ENST00000609407 1511 ntBASIC28.44■■■□□ 2.14
UBN1Q9NPG3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
UBN1Q9NPG3 AC016575.1-201ENST00000607026 382 ntBASIC28.44■■■□□ 2.14
UBN1Q9NPG3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
UBN1Q9NPG3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.43■■■□□ 2.14
UBN1Q9NPG3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
UBN1Q9NPG3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.43■■■□□ 2.14
UBN1Q9NPG3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
UBN1Q9NPG3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
UBN1Q9NPG3 MIR4449-201ENST00000578365 66 ntBASIC28.42■■■□□ 2.14
UBN1Q9NPG3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.42■■■□□ 2.14
UBN1Q9NPG3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
UBN1Q9NPG3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC28.42■■■□□ 2.14
UBN1Q9NPG3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.41■■■□□ 2.14
UBN1Q9NPG3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.41■■■□□ 2.14
UBN1Q9NPG3 CR559946.2-201ENST00000623684 991 ntBASIC28.4■■■□□ 2.14
UBN1Q9NPG3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
UBN1Q9NPG3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
UBN1Q9NPG3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
UBN1Q9NPG3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms