Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
UPF2Q9HAU5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
UPF2Q9HAU5 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
UPF2Q9HAU5 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
UPF2Q9HAU5 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
UPF2Q9HAU5 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
UPF2Q9HAU5 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC32.03■■■□□ 2.72
UPF2Q9HAU5 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC32.03■■■□□ 2.72
UPF2Q9HAU5 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
UPF2Q9HAU5 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
UPF2Q9HAU5 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
UPF2Q9HAU5 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC32.01■■■□□ 2.71
UPF2Q9HAU5 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32■■■□□ 2.71
UPF2Q9HAU5 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
UPF2Q9HAU5 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
UPF2Q9HAU5 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC32■■■□□ 2.71
UPF2Q9HAU5 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC32■■■□□ 2.71
UPF2Q9HAU5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
UPF2Q9HAU5 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
UPF2Q9HAU5 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.97■■■□□ 2.71
UPF2Q9HAU5 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
UPF2Q9HAU5 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
UPF2Q9HAU5 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC31.97■■■□□ 2.71
UPF2Q9HAU5 DRD5P2-201ENST00000421395 2012 ntBASIC31.97■■■□□ 2.71
UPF2Q9HAU5 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
UPF2Q9HAU5 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
UPF2Q9HAU5 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
UPF2Q9HAU5 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.92■■■□□ 2.7
UPF2Q9HAU5 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
UPF2Q9HAU5 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.9■■■□□ 2.7
UPF2Q9HAU5 WASH5P-204ENST00000632292 975 ntBASIC31.9■■■□□ 2.7
UPF2Q9HAU5 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
UPF2Q9HAU5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
UPF2Q9HAU5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.88■■■□□ 2.69
UPF2Q9HAU5 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
UPF2Q9HAU5 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
UPF2Q9HAU5 AP002365.1-201ENST00000603448 772 ntBASIC31.88■■■□□ 2.69
UPF2Q9HAU5 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
UPF2Q9HAU5 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.87■■■□□ 2.69
UPF2Q9HAU5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.86■■■□□ 2.69
UPF2Q9HAU5 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.86■■■□□ 2.69
UPF2Q9HAU5 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
UPF2Q9HAU5 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.83■■■□□ 2.69
UPF2Q9HAU5 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
UPF2Q9HAU5 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
UPF2Q9HAU5 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.82■■■□□ 2.68
UPF2Q9HAU5 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
UPF2Q9HAU5 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
UPF2Q9HAU5 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.81■■■□□ 2.68
UPF2Q9HAU5 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
UPF2Q9HAU5 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
UPF2Q9HAU5 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
UPF2Q9HAU5 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
UPF2Q9HAU5 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
UPF2Q9HAU5 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
UPF2Q9HAU5 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
UPF2Q9HAU5 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
UPF2Q9HAU5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
UPF2Q9HAU5 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.75■■■□□ 2.67
UPF2Q9HAU5 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
UPF2Q9HAU5 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
UPF2Q9HAU5 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
UPF2Q9HAU5 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
UPF2Q9HAU5 AL121749.1-202ENST00000609313 2153 ntBASIC31.74■■■□□ 2.67
UPF2Q9HAU5 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
UPF2Q9HAU5 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
UPF2Q9HAU5 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
UPF2Q9HAU5 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
UPF2Q9HAU5 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
UPF2Q9HAU5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC31.73■■■□□ 2.67
UPF2Q9HAU5 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
UPF2Q9HAU5 AC010864.1-201ENST00000609407 1511 ntBASIC31.72■■■□□ 2.67
UPF2Q9HAU5 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
UPF2Q9HAU5 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC31.71■■■□□ 2.67
UPF2Q9HAU5 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
UPF2Q9HAU5 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
UPF2Q9HAU5 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
UPF2Q9HAU5 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.7■■■□□ 2.66
UPF2Q9HAU5 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
UPF2Q9HAU5 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
UPF2Q9HAU5 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.69■■■□□ 2.66
UPF2Q9HAU5 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.69■■■□□ 2.66
UPF2Q9HAU5 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
UPF2Q9HAU5 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
UPF2Q9HAU5 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC31.68■■■□□ 2.66
UPF2Q9HAU5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.68■■■□□ 2.66
UPF2Q9HAU5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.68■■■□□ 2.66
UPF2Q9HAU5 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.68■■■□□ 2.66
UPF2Q9HAU5 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.68■■■□□ 2.66
UPF2Q9HAU5 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
UPF2Q9HAU5 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
UPF2Q9HAU5 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
UPF2Q9HAU5 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
UPF2Q9HAU5 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.64■■■□□ 2.66
UPF2Q9HAU5 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
UPF2Q9HAU5 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
UPF2Q9HAU5 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
UPF2Q9HAU5 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
UPF2Q9HAU5 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
UPF2Q9HAU5 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.62■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms