Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.03■■□□□ 1.76
PHC3Q8NDX5 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PHC3Q8NDX5 DUX4L28-201ENST00000623687 678 ntBASIC26.02■■□□□ 1.76
PHC3Q8NDX5 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PHC3Q8NDX5 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PHC3Q8NDX5 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
PHC3Q8NDX5 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PHC3Q8NDX5 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26■■□□□ 1.75
PHC3Q8NDX5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26■■□□□ 1.75
PHC3Q8NDX5 MIR3665-201ENST00000578708 105 ntBASIC26■■□□□ 1.75
PHC3Q8NDX5 AC135731.1-201ENST00000569415 2548 ntBASIC25.99■■□□□ 1.75
PHC3Q8NDX5 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PHC3Q8NDX5 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PHC3Q8NDX5 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.98■■□□□ 1.75
PHC3Q8NDX5 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
PHC3Q8NDX5 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
PHC3Q8NDX5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PHC3Q8NDX5 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PHC3Q8NDX5 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
PHC3Q8NDX5 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
PHC3Q8NDX5 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
PHC3Q8NDX5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.95■■□□□ 1.74
PHC3Q8NDX5 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
PHC3Q8NDX5 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.94■■□□□ 1.74
PHC3Q8NDX5 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PHC3Q8NDX5 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.92■■□□□ 1.74
PHC3Q8NDX5 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PHC3Q8NDX5 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PHC3Q8NDX5 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PHC3Q8NDX5 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PHC3Q8NDX5 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PHC3Q8NDX5 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PHC3Q8NDX5 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PHC3Q8NDX5 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PHC3Q8NDX5 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PHC3Q8NDX5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
PHC3Q8NDX5 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.91■■□□□ 1.74
PHC3Q8NDX5 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.91■■□□□ 1.74
PHC3Q8NDX5 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PHC3Q8NDX5 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.9■■□□□ 1.74
PHC3Q8NDX5 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
PHC3Q8NDX5 AC087741.3-201ENST00000624270 1347 ntBASIC25.89■■□□□ 1.74
PHC3Q8NDX5 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
PHC3Q8NDX5 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
PHC3Q8NDX5 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
PHC3Q8NDX5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PHC3Q8NDX5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.88■■□□□ 1.73
PHC3Q8NDX5 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PHC3Q8NDX5 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PHC3Q8NDX5 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.87■■□□□ 1.73
PHC3Q8NDX5 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.86■■□□□ 1.73
PHC3Q8NDX5 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PHC3Q8NDX5 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PHC3Q8NDX5 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
PHC3Q8NDX5 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PHC3Q8NDX5 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
PHC3Q8NDX5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PHC3Q8NDX5 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PHC3Q8NDX5 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.84■■□□□ 1.73
PHC3Q8NDX5 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
PHC3Q8NDX5 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.84■■□□□ 1.73
PHC3Q8NDX5 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
PHC3Q8NDX5 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PHC3Q8NDX5 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.83■■□□□ 1.73
PHC3Q8NDX5 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PHC3Q8NDX5 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PHC3Q8NDX5 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PHC3Q8NDX5 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
PHC3Q8NDX5 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.83■■□□□ 1.72
PHC3Q8NDX5 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
PHC3Q8NDX5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
PHC3Q8NDX5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
PHC3Q8NDX5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.82■■□□□ 1.72
PHC3Q8NDX5 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PHC3Q8NDX5 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PHC3Q8NDX5 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.79■■□□□ 1.72
PHC3Q8NDX5 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.79■■□□□ 1.72
PHC3Q8NDX5 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.78■■□□□ 1.72
PHC3Q8NDX5 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.78■■□□□ 1.72
PHC3Q8NDX5 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
PHC3Q8NDX5 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
PHC3Q8NDX5 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PHC3Q8NDX5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PHC3Q8NDX5 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PHC3Q8NDX5 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.76■■□□□ 1.71
PHC3Q8NDX5 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PHC3Q8NDX5 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PHC3Q8NDX5 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PHC3Q8NDX5 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
PHC3Q8NDX5 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PHC3Q8NDX5 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.75■■□□□ 1.71
PHC3Q8NDX5 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PHC3Q8NDX5 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.75■■□□□ 1.71
PHC3Q8NDX5 AL135925.1-201ENST00000605920 1701 ntBASIC25.75■■□□□ 1.71
PHC3Q8NDX5 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PHC3Q8NDX5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.75■■□□□ 1.71
PHC3Q8NDX5 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
PHC3Q8NDX5 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PHC3Q8NDX5 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PHC3Q8NDX5 AC044849.2-201ENST00000606596 710 ntBASIC25.74■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms