Protein–RNA interactions for Protein: Q07988

YLR040C, Cell wall protein YLR040C, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR040CQ07988 RPD3YNL330C 1302 nt8.13□□□□□ -1.11
YLR040CQ07988 YDR455CYDR455C 309 nt8.13□□□□□ -1.11
YLR040CQ07988 LSM5YER146W 282 nt8.13□□□□□ -1.11
YLR040CQ07988 VRG4YGL225W 1014 nt8.13□□□□□ -1.11
YLR040CQ07988 CWP2YKL096W-A 279 nt8.13□□□□□ -1.11
YLR040CQ07988 LSR1LSR1 1175 nt8.13□□□□□ -1.11
YLR040CQ07988 TOK1YJL093C 2076 nt8.13□□□□□ -1.11
YLR040CQ07988 TPS1YBR126C 1488 nt8.13□□□□□ -1.11
YLR040CQ07988 FUN14YAL008W 597 nt8.12□□□□□ -1.11
YLR040CQ07988 YJL055WYJL055W 738 nt8.12□□□□□ -1.11
YLR040CQ07988 MDM35YKL053C-A 261 nt8.12□□□□□ -1.11
YLR040CQ07988 TIM44YIL022W 1296 nt8.11□□□□□ -1.11
YLR040CQ07988 ARA2YMR041C 1008 nt8.11□□□□□ -1.11
YLR040CQ07988 HMG2YLR450W 3138 nt8.1□□□□□ -1.11
YLR040CQ07988 YPI1YFR003C 468 nt8.1□□□□□ -1.11
YLR040CQ07988 YJL195CYJL195C 702 nt8.1□□□□□ -1.11
YLR040CQ07988 HXT12YIL170W 1374 nt8.1□□□□□ -1.11
YLR040CQ07988 YHR218WYHR218W 1812 nt8.09□□□□□ -1.11
YLR040CQ07988 ITR2YOL103W 1830 nt8.09□□□□□ -1.11
YLR040CQ07988 RIB7YBR153W 735 nt8.09□□□□□ -1.11
YLR040CQ07988 ERG13YML126C 1476 nt8.08□□□□□ -1.12
YLR040CQ07988 DDI1YER143W 1287 nt8.08□□□□□ -1.12
YLR040CQ07988 ADH7YCR105W 1086 nt8.07□□□□□ -1.12
YLR040CQ07988 VMA11YPL234C 495 nt8.07□□□□□ -1.12
YLR040CQ07988 TIP1YBR067C 633 nt8.07□□□□□ -1.12
YLR040CQ07988 MAS1YLR163C 1389 nt8.07□□□□□ -1.12
YLR040CQ07988 YHL008CYHL008C 1884 nt8.06□□□□□ -1.12
YLR040CQ07988 TPO4YOR273C 1980 nt8.06□□□□□ -1.12
YLR040CQ07988 YNR029CYNR029C 1290 nt8.06□□□□□ -1.12
YLR040CQ07988 YRF1-2YER190W 5046 nt8.05□□□□□ -1.12
YLR040CQ07988 YLR349WYLR349W 507 nt8.05□□□□□ -1.12
YLR040CQ07988 TMA23YMR269W 636 nt8.05□□□□□ -1.12
YLR040CQ07988 HXT10YFL011W 1641 nt8.04□□□□□ -1.12
YLR040CQ07988 RAD51YER095W 1203 nt8.04□□□□□ -1.12
YLR040CQ07988 PAU15YIR041W 375 nt8.04□□□□□ -1.12
YLR040CQ07988 YMR262WYMR262W 942 nt8.04□□□□□ -1.12
YLR040CQ07988 GAL3YDR009W 1563 nt8.03□□□□□ -1.12
YLR040CQ07988 YLR122CYLR122C 378 nt8.03□□□□□ -1.12
YLR040CQ07988 SAC7YDR389W 1965 nt8.02□□□□□ -1.12
YLR040CQ07988 RIB2YOL066C 1776 nt8.02□□□□□ -1.13
YLR040CQ07988 RRT8YOL048C 1029 nt8.02□□□□□ -1.13
YLR040CQ07988 KRR1YCL059C 951 nt8.01□□□□□ -1.13
YLR040CQ07988 YDR510C-AYDR510C-A 117 nt8.01□□□□□ -1.13
YLR040CQ07988 YJR154WYJR154W 1041 nt8.01□□□□□ -1.13
YLR040CQ07988 ADH1YOL086C 1047 nt8.01□□□□□ -1.13
YLR040CQ07988 SNX3YOR357C 489 nt8.01□□□□□ -1.13
YLR040CQ07988 IMO32YGR031W 1029 nt8□□□□□ -1.13
YLR040CQ07988 RPC31YNL151C 756 nt8□□□□□ -1.13
YLR040CQ07988 YEL008WYEL008W 381 nt7.99□□□□□ -1.13
YLR040CQ07988 URA8YJR103W 1737 nt7.98□□□□□ -1.13
YLR040CQ07988 RIM2YBR192W 1134 nt7.98□□□□□ -1.13
YLR040CQ07988 Q0010Q0010 387 nt7.98□□□□□ -1.13
YLR040CQ07988 BUR6YER159C 429 nt7.97□□□□□ -1.13
YLR040CQ07988 CPD1YGR247W 720 nt7.96□□□□□ -1.14
YLR040CQ07988 ABZ2YMR289W 1125 nt7.96□□□□□ -1.14
YLR040CQ07988 AGP3YFL055W 1677 nt7.95□□□□□ -1.14
YLR040CQ07988 ADE8YDR408C 645 nt7.95□□□□□ -1.14
YLR040CQ07988 ELO1YJL196C 933 nt7.95□□□□□ -1.14
YLR040CQ07988 YJR114WYJR114W 393 nt7.95□□□□□ -1.14
YLR040CQ07988 YNR064CYNR064C 873 nt7.95□□□□□ -1.14
YLR040CQ07988 DPL1YDR294C 1770 nt7.94□□□□□ -1.14
YLR040CQ07988 FRA1YLL029W 2250 nt7.94□□□□□ -1.14
YLR040CQ07988 YMR265CYMR265C 1386 nt7.94□□□□□ -1.14
YLR040CQ07988 INH1YDL181W 258 nt7.93□□□□□ -1.14
YLR040CQ07988 LCP5YER127W 1074 nt7.92□□□□□ -1.14
YLR040CQ07988 tS(GCU)LtS(GCU)L 80 nt7.92□□□□□ -1.14
YLR040CQ07988 URH1YDR400W 1023 nt7.91□□□□□ -1.14
YLR040CQ07988 RPN14YGL004C 1254 nt7.91□□□□□ -1.14
YLR040CQ07988 HAP5YOR358W 729 nt7.91□□□□□ -1.14
YLR040CQ07988 DAK2YFL053W 1776 nt7.91□□□□□ -1.14
YLR040CQ07988 KEL3YPL263C 1956 nt7.9□□□□□ -1.14
YLR040CQ07988 LEU4YNL104C 1860 nt7.9□□□□□ -1.14
YLR040CQ07988 TOM20YGR082W 552 nt7.9□□□□□ -1.14
YLR040CQ07988 ESS1YJR017C 513 nt7.88□□□□□ -1.15
YLR040CQ07988 OPI3YJR073C 621 nt7.88□□□□□ -1.15
YLR040CQ07988 SUV3YPL029W 2214 nt7.88□□□□□ -1.15
YLR040CQ07988 YFR036W-AYFR036W-A 651 nt7.87□□□□□ -1.15
YLR040CQ07988 NBA1YOL070C 1506 nt7.87□□□□□ -1.15
YLR040CQ07988 TVP23YDR084C 600 nt7.85□□□□□ -1.15
YLR040CQ07988 AI5_BETAQ0075 1065 nt7.85□□□□□ -1.15
YLR040CQ07988 YDR467CYDR467C 327 nt7.85□□□□□ -1.15
YLR040CQ07988 PCP1YGR101W 1041 nt7.85□□□□□ -1.15
YLR040CQ07988 NAP1YKR048C 1254 nt7.85□□□□□ -1.15
YLR040CQ07988 GNP1YDR508C 1992 nt7.84□□□□□ -1.15
YLR040CQ07988 SNZ1YMR096W 894 nt7.84□□□□□ -1.15
YLR040CQ07988 YPR126CYPR126C 309 nt7.84□□□□□ -1.15
YLR040CQ07988 snR31snR31 225 nt7.84□□□□□ -1.15
YLR040CQ07988 HXK1YFR053C 1458 nt7.83□□□□□ -1.16
YLR040CQ07988 ALD5YER073W 1563 nt7.83□□□□□ -1.16
YLR040CQ07988 THI72YOR192C 1800 nt7.82□□□□□ -1.16
YLR040CQ07988 PAB1YER165W 1734 nt7.82□□□□□ -1.16
YLR040CQ07988 SPS100YHR139C 981 nt7.82□□□□□ -1.16
YLR040CQ07988 CRC1YOR100C 984 nt7.82□□□□□ -1.16
YLR040CQ07988 YOR072WYOR072W 315 nt7.81□□□□□ -1.16
YLR040CQ07988 IML3YBR107C 738 nt7.81□□□□□ -1.16
YLR040CQ07988 SFL1YOR140W 2301 nt7.81□□□□□ -1.16
YLR040CQ07988 NPP2YEL016C 1482 nt7.81□□□□□ -1.16
YLR040CQ07988 CCT5YJR064W 1689 nt7.8□□□□□ -1.16
YLR040CQ07988 tE(CUC)DtE(CUC)D 72 nt7.8□□□□□ -1.16
YLR040CQ07988 tE(CUC)ItE(CUC)I 72 nt7.8□□□□□ -1.16
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms