RNA–Protein interactions for RNA: YDR508C

GNP1, Transcript of High-affinity glutamine permease, yeastyeast

Gene GNP1, Length 1,992 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GNP1YDR508C DRS1P32892 752 aaKnown RBP14.76□□□□□ -0.05
GNP1YDR508C TFA1P36100 482 aa14.3□□□□□ -0.12
GNP1YDR508C RQC2Q12532 1038 aaKnown RBP14.25□□□□□ -0.13
GNP1YDR508C TAF7Q05021 590 aa13.99□□□□□ -0.17
GNP1YDR508C BFR2Q06631 534 aaKnown RBP13.63□□□□□ -0.23
GNP1YDR508C MTC1P47018 478 aaKnown RBP12.76□□□□□ -0.37
GNP1YDR508C LEO1P38439 464 aa12.54□□□□□ -0.4
GNP1YDR508C DMA1P38823 416 aa12.5□□□□□ -0.41
GNP1YDR508C AVT3P36062 692 aa12.39□□□□□ -0.43
GNP1YDR508C URN1Q06525 465 aaKnown RBP12.05□□□□□ -0.48
GNP1YDR508C DIP2Q12220 943 aaPredicted RBP11.91□□□□□ -0.5
GNP1YDR508C NAP1P25293 417 aaKnown RBP11.88□□□□□ -0.51
GNP1YDR508C IOC4Q04213 475 aa11.77□□□□□ -0.53
GNP1YDR508C AIM44Q99299 758 aa11.7□□□□□ -0.54
GNP1YDR508C IFH1P39520 1085 aa11.69□□□□□ -0.54
GNP1YDR508C LEU3P08638 886 aa11.65□□□□□ -0.55
GNP1YDR508C ORC1P54784 914 aaPredicted RBP11.47□□□□□ -0.57
GNP1YDR508C SGS1P35187 1447 aa11.47□□□□□ -0.57
GNP1YDR508C DMA2P53924 522 aa11.45□□□□□ -0.58
GNP1YDR508C ABP1P15891 592 aaKnown RBP11.45□□□□□ -0.58
GNP1YDR508C YRB30P53107 440 aaPredicted RBP11.4□□□□□ -0.58
GNP1YDR508C RLF2Q12495 606 aa11.31□□□□□ -0.6
GNP1YDR508C SAS10Q12136 610 aaPredicted RBP11.28□□□□□ -0.6
GNP1YDR508C TOP1P04786 769 aa11.17□□□□□ -0.62
GNP1YDR508C PTP3P40048 928 aa11.12□□□□□ -0.63
GNP1YDR508C INO80P53115 1489 aa11.1□□□□□ -0.63
GNP1YDR508C RPN1P38764 993 aaKnown RBP11.1□□□□□ -0.63
GNP1YDR508C SNU71P53207 620 aaKnown RBP11.1□□□□□ -0.63
GNP1YDR508C SPA2P23201 1466 aaKnown RBP11.03□□□□□ -0.64
GNP1YDR508C SSN2P38931 1420 aa11.03□□□□□ -0.64
GNP1YDR508C TCB3Q03640 1545 aaKnown RBP10.93□□□□□ -0.66
GNP1YDR508C YML020WQ03722 664 aa10.89□□□□□ -0.67
GNP1YDR508C NOP8Q08287 484 aaPredicted RBP10.88□□□□□ -0.67
GNP1YDR508C YFR016CP43597 1233 aaKnown RBP10.87□□□□□ -0.67
GNP1YDR508C CKB1P43639 278 aa10.85□□□□□ -0.67
GNP1YDR508C SIS2P36024 562 aa10.84□□□□□ -0.67
GNP1YDR508C KRI1P42846 591 aaKnown RBP10.83□□□□□ -0.68
GNP1YDR508C TY1B-DR4Q07793 1604 aa10.83□□□□□ -0.68
GNP1YDR508C BRL1P38770 471 aa10.8□□□□□ -0.68
GNP1YDR508C SWE1P32944 819 aa10.73□□□□□ -0.69
GNP1YDR508C MNN4P36044 1178 aa10.7□□□□□ -0.7
GNP1YDR508C SSP1P38871 571 aa10.7□□□□□ -0.7
GNP1YDR508C ATG36P46983 293 aa10.68□□□□□ -0.7
GNP1YDR508C NUG1P40010 520 aaKnown RBP10.67□□□□□ -0.7
GNP1YDR508C HSL1P34244 1518 aa10.67□□□□□ -0.7
GNP1YDR508C MDG1P53885 366 aa10.66□□□□□ -0.7
GNP1YDR508C RSE1Q04693 1361 aaKnown RBP10.66□□□□□ -0.7
GNP1YDR508C NOP7P53261 605 aaKnown RBP10.64□□□□□ -0.71
GNP1YDR508C MON2P48563 1636 aaPredicted RBP10.63□□□□□ -0.71
GNP1YDR508C SLX8P40072 274 aa10.62□□□□□ -0.71
GNP1YDR508C GIN4Q12263 1142 aa10.62□□□□□ -0.71
GNP1YDR508C SPT6P23615 1451 aaKnown RBP10.62□□□□□ -0.71
GNP1YDR508C RPS0BP46654 252 aaKnown RBP10.58□□□□□ -0.72
GNP1YDR508C SUB1P54000 292 aaKnown RBP10.58□□□□□ -0.72
GNP1YDR508C LAM6Q08001 693 aa10.56□□□□□ -0.72
GNP1YDR508C ASF1P32447 279 aa10.55□□□□□ -0.72
GNP1YDR508C VPS72Q03388 795 aa10.55□□□□□ -0.72
GNP1YDR508C FAR11P53917 953 aa10.54□□□□□ -0.72
GNP1YDR508C SWR1Q05471 1514 aa10.53□□□□□ -0.72
GNP1YDR508C TPO2P53283 614 aa10.51□□□□□ -0.73
GNP1YDR508C BRN1P38170 754 aa10.5□□□□□ -0.73
GNP1YDR508C HIR3P47171 1648 aa10.5□□□□□ -0.73
GNP1YDR508C RTS3P53289 263 aa10.49□□□□□ -0.73
GNP1YDR508C MRX12P47084 519 aa10.48□□□□□ -0.73
GNP1YDR508C DOS2P54858 310 aa10.48□□□□□ -0.73
GNP1YDR508C GEF1P37020 779 aa10.46□□□□□ -0.73
GNP1YDR508C SPC42P36094 363 aa10.45□□□□□ -0.74
GNP1YDR508C XRN1P22147 1528 aaKnown RBP10.45□□□□□ -0.74
GNP1YDR508C EBP2P36049 427 aaKnown RBP10.45□□□□□ -0.74
GNP1YDR508C OSW7P43611 510 aa10.44□□□□□ -0.74
GNP1YDR508C YTA7P40340 1379 aa10.43□□□□□ -0.74
GNP1YDR508C SSA1P10591 642 aaKnown RBP10.43□□□□□ -0.74
GNP1YDR508C PAM1P37304 830 aaKnown RBP10.43□□□□□ -0.74
GNP1YDR508C CWC22P53333 577 aaKnown RBP10.42□□□□□ -0.74
GNP1YDR508C SPB4P25808 606 aaPredicted RBP10.41□□□□□ -0.74
GNP1YDR508C MET10P39692 1035 aa10.39□□□□□ -0.75
GNP1YDR508C YJR008WP47085 338 aa10.37□□□□□ -0.75
GNP1YDR508C HGH1P48362 394 aaKnown RBP10.37□□□□□ -0.75
GNP1YDR508C MAM3Q12296 706 aa10.37□□□□□ -0.75
GNP1YDR508C KIN1P13185 1064 aa10.37□□□□□ -0.75
GNP1YDR508C SSF1P38789 453 aaPredicted RBP10.36□□□□□ -0.75
GNP1YDR508C JSN1P47135 1091 aaKnown RBP RIP-Chip data10.36□□□□□ -0.75not detected
GNP1YDR508C TOA1P32773 286 aa10.33□□□□□ -0.76
GNP1YDR508C BUD21Q08492 214 aaPredicted RBP10.33□□□□□ -0.76
GNP1YDR508C SUB2Q07478 446 aaKnown RBP10.32□□□□□ -0.76
GNP1YDR508C RIM101P33400 625 aa10.32□□□□□ -0.76
GNP1YDR508C REV3P14284 1504 aa10.3□□□□□ -0.76
GNP1YDR508C NOP2P40991 618 aaKnown RBP10.3□□□□□ -0.76
GNP1YDR508C RLP24Q07915 199 aaKnown RBP10.3□□□□□ -0.76
GNP1YDR508C OCA5P38738 679 aa10.28□□□□□ -0.76
GNP1YDR508C HIF1Q12373 385 aa10.28□□□□□ -0.76
GNP1YDR508C NAB3P38996 802 aaKnown RBP RIP-Chip data10.27□□□□□ -0.77not detected
GNP1YDR508C PDR1P12383 1068 aa10.25□□□□□ -0.77
GNP1YDR508C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.25□□□□□ -0.77not detected
GNP1YDR508C SLD2P34252 453 aa10.23□□□□□ -0.77
GNP1YDR508C RRN6P32786 894 aa10.23□□□□□ -0.77
GNP1YDR508C TAF2P23255 1407 aa10.22□□□□□ -0.77
GNP1YDR508C YNR021WP53723 404 aaKnown RBP10.21□□□□□ -0.78
GNP1YDR508C SIN3P22579 1536 aa10.2□□□□□ -0.78
GNP1YDR508C ZDS1P50111 915 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms