Protein–RNA interactions for Protein: Q04487

SHH3, Mitochondrial inner membrane protein SHH3, yeastyeast

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH3Q04487 ASP3-4YLR160C 1089 nt7.26□□□□□ -1.25
SHH3Q04487 SMM1YNR015W 1155 nt7.26□□□□□ -1.25
SHH3Q04487 THI6YPL214C 1623 nt7.26□□□□□ -1.25
SHH3Q04487 MET30YIL046W 1923 nt7.25□□□□□ -1.25
SHH3Q04487 RPD3YNL330C 1302 nt7.25□□□□□ -1.25
SHH3Q04487 SAM3YPL274W 1764 nt7.24□□□□□ -1.25
SHH3Q04487 tD(GUC)BtD(GUC)B 72 nt7.24□□□□□ -1.25
SHH3Q04487 tD(GUC)DtD(GUC)D 72 nt7.24□□□□□ -1.25
SHH3Q04487 tD(GUC)G1tD(GUC)G1 72 nt7.24□□□□□ -1.25
SHH3Q04487 tD(GUC)G2tD(GUC)G2 72 nt7.24□□□□□ -1.25
SHH3Q04487 tD(GUC)I1tD(GUC)I1 72 nt7.24□□□□□ -1.25
SHH3Q04487 tD(GUC)I2tD(GUC)I2 72 nt7.24□□□□□ -1.25
SHH3Q04487 tD(GUC)J1tD(GUC)J1 72 nt7.24□□□□□ -1.25
SHH3Q04487 tD(GUC)J2tD(GUC)J2 72 nt7.24□□□□□ -1.25
SHH3Q04487 tD(GUC)J3tD(GUC)J3 72 nt7.24□□□□□ -1.25
SHH3Q04487 tD(GUC)J4tD(GUC)J4 72 nt7.24□□□□□ -1.25
SHH3Q04487 tD(GUC)KtD(GUC)K 72 nt7.24□□□□□ -1.25
SHH3Q04487 tD(GUC)L1tD(GUC)L1 72 nt7.24□□□□□ -1.25
SHH3Q04487 tD(GUC)L2tD(GUC)L2 72 nt7.24□□□□□ -1.25
SHH3Q04487 tD(GUC)MtD(GUC)M 72 nt7.24□□□□□ -1.25
SHH3Q04487 tD(GUC)OtD(GUC)O 72 nt7.24□□□□□ -1.25
SHH3Q04487 RIB3YDR487C 627 nt7.24□□□□□ -1.25
SHH3Q04487 AGP3YFL055W 1677 nt7.23□□□□□ -1.25
SHH3Q04487 LSR1LSR1 1175 nt7.23□□□□□ -1.25
SHH3Q04487 EAF3YPR023C 1206 nt7.23□□□□□ -1.25
SHH3Q04487 RPT5YOR117W 1305 nt7.23□□□□□ -1.25
SHH3Q04487 DUR3YHL016C 2208 nt7.23□□□□□ -1.25
SHH3Q04487 OYE2YHR179W 1203 nt7.22□□□□□ -1.25
SHH3Q04487 YLR111WYLR111W 333 nt7.22□□□□□ -1.25
SHH3Q04487 YNL190WYNL190W 615 nt7.22□□□□□ -1.25
SHH3Q04487 YDR455CYDR455C 309 nt7.21□□□□□ -1.26
SHH3Q04487 TIM44YIL022W 1296 nt7.21□□□□□ -1.26
SHH3Q04487 DUS3YLR401C 2007 nt7.2□□□□□ -1.26
SHH3Q04487 HBS1YKR084C 1836 nt7.2□□□□□ -1.26
SHH3Q04487 CAB5YDR196C 726 nt7.2□□□□□ -1.26
SHH3Q04487 RTG2YGL252C 1767 nt7.2□□□□□ -1.26
SHH3Q04487 ITR2YOL103W 1830 nt7.2□□□□□ -1.26
SHH3Q04487 YJL118WYJL118W 660 nt7.19□□□□□ -1.26
SHH3Q04487 VMA11YPL234C 495 nt7.19□□□□□ -1.26
SHH3Q04487 LAS17YOR181W 1902 nt7.19□□□□□ -1.26
SHH3Q04487 YLR173WYLR173W 1827 nt7.18□□□□□ -1.26
SHH3Q04487 LOT5YKL183W 921 nt7.18□□□□□ -1.26
SHH3Q04487 YMR262WYMR262W 942 nt7.18□□□□□ -1.26
SHH3Q04487 KRR1YCL059C 951 nt7.17□□□□□ -1.26
SHH3Q04487 GLR1YPL091W 1452 nt7.17□□□□□ -1.26
SHH3Q04487 TPS1YBR126C 1488 nt7.17□□□□□ -1.26
SHH3Q04487 ADE5,7YGL234W 2409 nt7.16□□□□□ -1.26
SHH3Q04487 LSM5YER146W 282 nt7.16□□□□□ -1.26
SHH3Q04487 YLR437C-AYLR437C-A 228 nt7.16□□□□□ -1.26
SHH3Q04487 HXT12YIL170W 1374 nt7.16□□□□□ -1.26
SHH3Q04487 ERG13YML126C 1476 nt7.16□□□□□ -1.26
SHH3Q04487 LSB3YFR024C-A 1380 nt7.15□□□□□ -1.26
SHH3Q04487 GCD11YER025W 1584 nt7.15□□□□□ -1.27
SHH3Q04487 YJL055WYJL055W 738 nt7.14□□□□□ -1.27
SHH3Q04487 TIP1YBR067C 633 nt7.14□□□□□ -1.27
SHH3Q04487 RIM2YBR192W 1134 nt7.14□□□□□ -1.27
SHH3Q04487 POP2YNR052C 1302 nt7.13□□□□□ -1.27
SHH3Q04487 VRG4YGL225W 1014 nt7.13□□□□□ -1.27
SHH3Q04487 RPC31YNL151C 756 nt7.13□□□□□ -1.27
SHH3Q04487 RIB7YBR153W 735 nt7.13□□□□□ -1.27
SHH3Q04487 SAC7YDR389W 1965 nt7.13□□□□□ -1.27
SHH3Q04487 ECM10YEL030W 1935 nt7.13□□□□□ -1.27
SHH3Q04487 DDI1YER143W 1287 nt7.12□□□□□ -1.27
SHH3Q04487 YMR226CYMR226C 804 nt7.12□□□□□ -1.27
SHH3Q04487 TMA23YMR269W 636 nt7.12□□□□□ -1.27
SHH3Q04487 RRT8YOL048C 1029 nt7.12□□□□□ -1.27
SHH3Q04487 SNX3YOR357C 489 nt7.12□□□□□ -1.27
SHH3Q04487 PMA2YPL036W 2844 nt7.12□□□□□ -1.27
SHH3Q04487 FET5YFL041W 1869 nt7.11□□□□□ -1.27
SHH3Q04487 RSC4YKR008W 1878 nt7.11□□□□□ -1.27
SHH3Q04487 GAL3YDR009W 1563 nt7.1□□□□□ -1.27
SHH3Q04487 FRT1YOR324C 1809 nt7.1□□□□□ -1.27
SHH3Q04487 DPL1YDR294C 1770 nt7.1□□□□□ -1.27
SHH3Q04487 INH1YDL181W 258 nt7.08□□□□□ -1.28
SHH3Q04487 IMO32YGR031W 1029 nt7.08□□□□□ -1.28
SHH3Q04487 YMR265CYMR265C 1386 nt7.06□□□□□ -1.28
SHH3Q04487 YPI1YFR003C 468 nt7.05□□□□□ -1.28
SHH3Q04487 YNR064CYNR064C 873 nt7.05□□□□□ -1.28
SHH3Q04487 NDE1YMR145C 1683 nt7.05□□□□□ -1.28
SHH3Q04487 ADE16YLR028C 1776 nt7.04□□□□□ -1.28
SHH3Q04487 RIB2YOL066C 1776 nt7.04□□□□□ -1.28
SHH3Q04487 LEU4YNL104C 1860 nt7.04□□□□□ -1.28
SHH3Q04487 RPN14YGL004C 1254 nt7.03□□□□□ -1.28
SHH3Q04487 ELO1YJL196C 933 nt7.03□□□□□ -1.28
SHH3Q04487 YJR114WYJR114W 393 nt7.03□□□□□ -1.28
SHH3Q04487 HAP5YOR358W 729 nt7.03□□□□□ -1.28
SHH3Q04487 ADE8YDR408C 645 nt7.02□□□□□ -1.29
SHH3Q04487 AIM34YMR003W 597 nt7.02□□□□□ -1.29
SHH3Q04487 YMR244WYMR244W 1068 nt7.02□□□□□ -1.29
SHH3Q04487 snR4snR4 186 nt7.02□□□□□ -1.29
SHH3Q04487 KEL3YPL263C 1956 nt7.01□□□□□ -1.29
SHH3Q04487 ORT1YOR130C 879 nt7.01□□□□□ -1.29
SHH3Q04487 SUV3YPL029W 2214 nt7□□□□□ -1.29
SHH3Q04487 PFS2YNL317W 1398 nt7□□□□□ -1.29
SHH3Q04487 GGC1YDL198C 903 nt7□□□□□ -1.29
SHH3Q04487 CTF3YLR381W 2202 nt6.99□□□□□ -1.29
SHH3Q04487 BEM1YBR200W 1656 nt6.99□□□□□ -1.29
SHH3Q04487 OPI3YJR073C 621 nt6.98□□□□□ -1.29
SHH3Q04487 tE(CUC)DtE(CUC)D 72 nt6.97□□□□□ -1.29
SHH3Q04487 tE(CUC)ItE(CUC)I 72 nt6.97□□□□□ -1.29
Retrieved 100 of 7,029 protein–RNA pairs in 93.6 ms