RNA–Protein interactions for RNA: YEL030W

ECM10, Transcript of Heat shock protein of the Hsp70 family, yeastyeast

Gene ECM10, Length 1,935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM10YEL030W RQC2Q12532 1038 aaKnown RBP12.8□□□□□ -0.36
ECM10YEL030W BFR2Q06631 534 aaKnown RBP12.35□□□□□ -0.43
ECM10YEL030W TAF7Q05021 590 aa11.62□□□□□ -0.55
ECM10YEL030W URN1Q06525 465 aaKnown RBP11.43□□□□□ -0.58
ECM10YEL030W MTC1P47018 478 aaKnown RBP11.23□□□□□ -0.61
ECM10YEL030W SIS2P36024 562 aa10.95□□□□□ -0.66
ECM10YEL030W EBP2P36049 427 aaKnown RBP10.95□□□□□ -0.66
ECM10YEL030W DRS1P32892 752 aaKnown RBP10.91□□□□□ -0.66
ECM10YEL030W TFA1P36100 482 aa10.89□□□□□ -0.67
ECM10YEL030W CAB3P36076 571 aa10.86□□□□□ -0.67
ECM10YEL030W NOP2P40991 618 aaKnown RBP10.8□□□□□ -0.68
ECM10YEL030W YFR016CP43597 1233 aaKnown RBP10.66□□□□□ -0.7
ECM10YEL030W AVT3P36062 692 aa10.56□□□□□ -0.72
ECM10YEL030W YRB30P53107 440 aaPredicted RBP10.43□□□□□ -0.74
ECM10YEL030W RPS0BP46654 252 aaKnown RBP10.42□□□□□ -0.74
ECM10YEL030W FAP1P53971 965 aa10.41□□□□□ -0.74
ECM10YEL030W DIP2Q12220 943 aaPredicted RBP10.37□□□□□ -0.75
ECM10YEL030W KRI1P42846 591 aaKnown RBP10.34□□□□□ -0.75
ECM10YEL030W NAP1P25293 417 aaKnown RBP10.31□□□□□ -0.76
ECM10YEL030W IOC4Q04213 475 aa10.29□□□□□ -0.76
ECM10YEL030W YPR148CQ06523 435 aa10.21□□□□□ -0.77
ECM10YEL030W NSR1P27476 414 aaKnown RBP RIP-Chip data10.16□□□□□ -0.78not detected
ECM10YEL030W CWC22P53333 577 aaKnown RBP10.15□□□□□ -0.78
ECM10YEL030W MNN4P36044 1178 aa10□□□□□ -0.81
ECM10YEL030W LEO1P38439 464 aa9.99□□□□□ -0.81
ECM10YEL030W AIM44Q99299 758 aa9.95□□□□□ -0.82
ECM10YEL030W DEF1P35732 738 aaKnown RBP9.94□□□□□ -0.82
ECM10YEL030W ENV11P53246 860 aa9.88□□□□□ -0.83
ECM10YEL030W PSH1Q12161 406 aa9.86□□□□□ -0.83
ECM10YEL030W SNU71P53207 620 aaKnown RBP9.86□□□□□ -0.83
ECM10YEL030W RSE1Q04693 1361 aaKnown RBP9.83□□□□□ -0.84
ECM10YEL030W TCB2P48231 1178 aa9.82□□□□□ -0.84
ECM10YEL030W DMA1P38823 416 aa9.78□□□□□ -0.84
ECM10YEL030W NUG1P40010 520 aaKnown RBP9.78□□□□□ -0.84
ECM10YEL030W TOP1P04786 769 aa9.78□□□□□ -0.84
ECM10YEL030W PRY3P47033 881 aa9.78□□□□□ -0.84
ECM10YEL030W RLP24Q07915 199 aaKnown RBP9.77□□□□□ -0.85
ECM10YEL030W IFH1P39520 1085 aa9.76□□□□□ -0.85
ECM10YEL030W NOP53Q12080 455 aaKnown RBP9.72□□□□□ -0.85
ECM10YEL030W MDG1P53885 366 aa9.72□□□□□ -0.85
ECM10YEL030W SPT7P35177 1332 aa9.69□□□□□ -0.86
ECM10YEL030W RLF2Q12495 606 aa9.69□□□□□ -0.86
ECM10YEL030W ORC1P54784 914 aaPredicted RBP9.66□□□□□ -0.86
ECM10YEL030W SPT2P06843 333 aaPredicted RBP9.65□□□□□ -0.86
ECM10YEL030W PRI1P10363 409 aa9.61□□□□□ -0.87
ECM10YEL030W HSP82P02829 709 aaKnown RBP9.59□□□□□ -0.87
ECM10YEL030W PLP2Q12017 286 aa9.58□□□□□ -0.88
ECM10YEL030W AAD16Q02895 342 aa9.58□□□□□ -0.88
ECM10YEL030W YGR130CP53278 816 aa9.57□□□□□ -0.88
ECM10YEL030W QCR6P00127 147 aa9.54□□□□□ -0.88
ECM10YEL030W SPT21P35209 758 aa9.54□□□□□ -0.88
ECM10YEL030W ENP1P38333 483 aaKnown RBP9.54□□□□□ -0.88
ECM10YEL030W RPN1P38764 993 aaKnown RBP9.54□□□□□ -0.88
ECM10YEL030W FPR3P38911 411 aaKnown RBP9.52□□□□□ -0.88
ECM10YEL030W TIF4632P39936 914 aaKnown RBP9.52□□□□□ -0.88
ECM10YEL030W FPR4Q06205 392 aaPredicted RBP9.52□□□□□ -0.88
ECM10YEL030W HIF1Q12373 385 aa9.52□□□□□ -0.89
ECM10YEL030W RNA1P11745 407 aaKnown RBP9.49□□□□□ -0.89
ECM10YEL030W TOA1P32773 286 aa9.48□□□□□ -0.89
ECM10YEL030W RPS0AP32905 252 aaKnown RBP9.48□□□□□ -0.89
ECM10YEL030W GIN4Q12263 1142 aa9.47□□□□□ -0.89
ECM10YEL030W FUN12P39730 1002 aaKnown RBP9.46□□□□□ -0.89
ECM10YEL030W RIX1P38883 763 aaPredicted RBP9.44□□□□□ -0.9
ECM10YEL030W GRX3Q03835 250 aa9.44□□□□□ -0.9
ECM10YEL030W NHA1Q99271 985 aa9.44□□□□□ -0.9
ECM10YEL030W INO80P53115 1489 aa9.43□□□□□ -0.9
ECM10YEL030W YNL011CP53980 444 aa9.43□□□□□ -0.9
ECM10YEL030W YTA7P40340 1379 aa9.42□□□□□ -0.9
ECM10YEL030W SEC3P33332 1336 aaKnown RBP9.42□□□□□ -0.9
ECM10YEL030W SWE1P32944 819 aa9.42□□□□□ -0.9
ECM10YEL030W TLG1Q03322 224 aa9.42□□□□□ -0.9
ECM10YEL030W SPC110P32380 944 aa9.41□□□□□ -0.9
ECM10YEL030W SUB1P54000 292 aaKnown RBP9.41□□□□□ -0.9
ECM10YEL030W SSA1P10591 642 aaKnown RBP9.41□□□□□ -0.9
ECM10YEL030W SSA2P10592 639 aaKnown RBP9.41□□□□□ -0.9
ECM10YEL030W PIL1P53252 339 aaKnown RBP9.4□□□□□ -0.9
ECM10YEL030W SKI3P17883 1432 aaKnown RBP9.39□□□□□ -0.91
ECM10YEL030W NMD2P38798 1089 aaKnown RBP9.38□□□□□ -0.91
ECM10YEL030W ISW2Q08773 1120 aa9.38□□□□□ -0.91
ECM10YEL030W CLC1P17891 233 aa9.36□□□□□ -0.91
ECM10YEL030W SPT16P32558 1035 aaKnown RBP9.35□□□□□ -0.91
ECM10YEL030W VPS4P52917 437 aa9.35□□□□□ -0.91
ECM10YEL030W BRL1P38770 471 aa9.34□□□□□ -0.91
ECM10YEL030W SAS10Q12136 610 aaPredicted RBP9.32□□□□□ -0.92
ECM10YEL030W ETT1Q08421 412 aaKnown RBP9.29□□□□□ -0.92
ECM10YEL030W RPG1P38249 964 aaKnown RBP9.29□□□□□ -0.92
ECM10YEL030W MPP10P47083 593 aaKnown RBP9.27□□□□□ -0.93
ECM10YEL030W YSH1Q06224 779 aaPredicted RBP9.27□□□□□ -0.93
ECM10YEL030W TCB3Q03640 1545 aaKnown RBP9.26□□□□□ -0.93
ECM10YEL030W VPS72Q03388 795 aa9.25□□□□□ -0.93
ECM10YEL030W BRN1P38170 754 aa9.25□□□□□ -0.93
ECM10YEL030W TPO2P53283 614 aa9.25□□□□□ -0.93
ECM10YEL030W SGS1P35187 1447 aa9.23□□□□□ -0.93
ECM10YEL030W NNF2P53253 936 aa9.23□□□□□ -0.93
ECM10YEL030W ATG36P46983 293 aa9.22□□□□□ -0.93
ECM10YEL030W IME2P32581 645 aa9.21□□□□□ -0.93
ECM10YEL030W ISW1P38144 1129 aa9.21□□□□□ -0.94
ECM10YEL030W SPA2P23201 1466 aaKnown RBP9.2□□□□□ -0.94
ECM10YEL030W ABP1P15891 592 aaKnown RBP9.2□□□□□ -0.94
ECM10YEL030W YCK3P39962 524 aa9.19□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms