Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
H3BM21 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.22■■□□□ 1.79
H3BM21 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
H3BM21 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.21■■□□□ 1.79
H3BM21 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
H3BM21 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
H3BM21 MIR6090-201ENST00000622481 60 ntBASIC26.21■■□□□ 1.79
H3BM21 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
H3BM21 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
H3BM21 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
H3BM21 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
H3BM21 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
H3BM21 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
H3BM21 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
H3BM21 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.18■■□□□ 1.78
H3BM21 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.18■■□□□ 1.78
H3BM21 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.18■■□□□ 1.78
H3BM21 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.18■■□□□ 1.78
H3BM21 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
H3BM21 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.17■■□□□ 1.78
H3BM21 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
H3BM21 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
H3BM21 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
H3BM21 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
H3BM21 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
H3BM21 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
H3BM21 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
H3BM21 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
H3BM21 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
H3BM21 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
H3BM21 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
H3BM21 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.14■■□□□ 1.78
H3BM21 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.13■■□□□ 1.77
H3BM21 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
H3BM21 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.11■■□□□ 1.77
H3BM21 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.1■■□□□ 1.77
H3BM21 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
H3BM21 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
H3BM21 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.09■■□□□ 1.77
H3BM21 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.08■■□□□ 1.77
H3BM21 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
H3BM21 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.07■■□□□ 1.76
H3BM21 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
H3BM21 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
H3BM21 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
H3BM21 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.06■■□□□ 1.76
H3BM21 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.06■■□□□ 1.76
H3BM21 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.06■■□□□ 1.76
H3BM21 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
H3BM21 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
H3BM21 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
H3BM21 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
H3BM21 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.03■■□□□ 1.76
H3BM21 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
H3BM21 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.02■■□□□ 1.76
H3BM21 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
H3BM21 LINC01971-201ENST00000617888 1048 ntBASIC26.02■■□□□ 1.76
H3BM21 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
H3BM21 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
H3BM21 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.01■■□□□ 1.75
H3BM21 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
H3BM21 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
H3BM21 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
H3BM21 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
H3BM21 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.99■■□□□ 1.75
H3BM21 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
H3BM21 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.99■■□□□ 1.75
H3BM21 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.99■■□□□ 1.75
H3BM21 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.98■■□□□ 1.75
H3BM21 DUX4L11-201ENST00000611504 1267 ntBASIC25.97■■□□□ 1.75
H3BM21 DUX4L12-201ENST00000614593 1267 ntBASIC25.97■■□□□ 1.75
H3BM21 DUX4L14-201ENST00000621227 1267 ntBASIC25.97■■□□□ 1.75
H3BM21 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
H3BM21 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.96■■□□□ 1.75
H3BM21 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.96■■□□□ 1.75
H3BM21 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.96■■□□□ 1.75
H3BM21 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.95■■□□□ 1.75
H3BM21 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.75
H3BM21 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
H3BM21 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
H3BM21 MIR639-201ENST00000384974 98 ntBASIC25.95■■□□□ 1.74
H3BM21 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.95■■□□□ 1.74
H3BM21 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
H3BM21 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
H3BM21 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
H3BM21 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
H3BM21 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
H3BM21 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.94■■□□□ 1.74
H3BM21 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
H3BM21 MIR3648-2-201ENST00000581792 180 ntBASIC25.93■■□□□ 1.74
H3BM21 MIR3648-1-201ENST00000615959 180 ntBASIC25.93■■□□□ 1.74
H3BM21 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.93■■□□□ 1.74
H3BM21 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.92■■□□□ 1.74
H3BM21 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
H3BM21 MIR4449-201ENST00000578365 66 ntBASIC25.91■■□□□ 1.74
H3BM21 AC016575.1-201ENST00000607026 382 ntBASIC25.91■■□□□ 1.74
H3BM21 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
H3BM21 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
H3BM21 AL135925.1-201ENST00000605920 1701 ntBASIC25.9■■□□□ 1.74
H3BM21 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms