Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV13-1A0A0B4J241 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV13-1A0A0B4J241 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV13-1A0A0B4J241 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV13-1A0A0B4J241 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV13-1A0A0B4J241 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV13-1A0A0B4J241 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TRAV13-1A0A0B4J241 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV13-1A0A0B4J241 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRAV13-1A0A0B4J241 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV13-1A0A0B4J241 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV13-1A0A0B4J241 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV13-1A0A0B4J241 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV13-1A0A0B4J241 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV13-1A0A0B4J241 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV13-1A0A0B4J241 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV13-1A0A0B4J241 AP002365.1-201ENST00000603448 772 ntBASIC18.09■□□□□ 0.49
TRAV13-1A0A0B4J241 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV13-1A0A0B4J241 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV13-1A0A0B4J241 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
TRAV13-1A0A0B4J241 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.08■□□□□ 0.48
TRAV13-1A0A0B4J241 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
TRAV13-1A0A0B4J241 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV13-1A0A0B4J241 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV13-1A0A0B4J241 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV13-1A0A0B4J241 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV13-1A0A0B4J241 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAV13-1A0A0B4J241 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV13-1A0A0B4J241 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV13-1A0A0B4J241 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV13-1A0A0B4J241 AC142086.6-201ENST00000621154 1765 ntBASIC18.07■□□□□ 0.48
TRAV13-1A0A0B4J241 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV13-1A0A0B4J241 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV13-1A0A0B4J241 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV13-1A0A0B4J241 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV13-1A0A0B4J241 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV13-1A0A0B4J241 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV13-1A0A0B4J241 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV13-1A0A0B4J241 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRAV13-1A0A0B4J241 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV13-1A0A0B4J241 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV13-1A0A0B4J241 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TRAV13-1A0A0B4J241 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.02■□□□□ 0.48
TRAV13-1A0A0B4J241 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV13-1A0A0B4J241 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV13-1A0A0B4J241 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV13-1A0A0B4J241 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRAV13-1A0A0B4J241 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV13-1A0A0B4J241 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18■□□□□ 0.47
TRAV13-1A0A0B4J241 AL139393.2-201ENST00000608721 2025 ntBASIC18■□□□□ 0.47
TRAV13-1A0A0B4J241 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV13-1A0A0B4J241 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18■□□□□ 0.47
TRAV13-1A0A0B4J241 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV13-1A0A0B4J241 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TRAV13-1A0A0B4J241 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV13-1A0A0B4J241 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV13-1A0A0B4J241 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV13-1A0A0B4J241 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV13-1A0A0B4J241 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV13-1A0A0B4J241 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV13-1A0A0B4J241 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC17.98■□□□□ 0.47
TRAV13-1A0A0B4J241 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV13-1A0A0B4J241 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV13-1A0A0B4J241 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TRAV13-1A0A0B4J241 WASH5P-204ENST00000632292 975 ntBASIC17.97■□□□□ 0.47
TRAV13-1A0A0B4J241 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV13-1A0A0B4J241 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRAV13-1A0A0B4J241 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV13-1A0A0B4J241 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV13-1A0A0B4J241 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV13-1A0A0B4J241 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV13-1A0A0B4J241 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV13-1A0A0B4J241 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV13-1A0A0B4J241 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC17.96■□□□□ 0.47
TRAV13-1A0A0B4J241 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV13-1A0A0B4J241 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV13-1A0A0B4J241 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV13-1A0A0B4J241 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV13-1A0A0B4J241 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV13-1A0A0B4J241 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV13-1A0A0B4J241 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TRAV13-1A0A0B4J241 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV13-1A0A0B4J241 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC17.93■□□□□ 0.46
TRAV13-1A0A0B4J241 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TRAV13-1A0A0B4J241 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV13-1A0A0B4J241 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC17.92■□□□□ 0.46
TRAV13-1A0A0B4J241 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV13-1A0A0B4J241 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV13-1A0A0B4J241 DRD5P2-201ENST00000421395 2012 ntBASIC17.91■□□□□ 0.46
TRAV13-1A0A0B4J241 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAV13-1A0A0B4J241 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
TRAV13-1A0A0B4J241 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV13-1A0A0B4J241 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV13-1A0A0B4J241 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV13-1A0A0B4J241 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV13-1A0A0B4J241 KLF16-203ENST00000592313 508 ntTSL 3 BASIC17.9■□□□□ 0.46
TRAV13-1A0A0B4J241 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV13-1A0A0B4J241 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.46
TRAV13-1A0A0B4J241 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV13-1A0A0B4J241 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms