Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 VPS34YLR240W 2628 nt1.69□□□□□ -2.14
RRP40Q08285 YER068C-AYER068C-A 432 nt1.69□□□□□ -2.14
RRP40Q08285 RLP24YLR009W 600 nt1.69□□□□□ -2.14
RRP40Q08285 BRX1YOL077C 876 nt1.69□□□□□ -2.14
RRP40Q08285 FYV12YOR183W 390 nt1.69□□□□□ -2.14
RRP40Q08285 UBP11YKR098C 2154 nt1.69□□□□□ -2.14
RRP40Q08285 UTP21YLR409C 2820 nt1.69□□□□□ -2.14
RRP40Q08285 15S_rRNA15S_rRNA 1649 nt1.69□□□□□ -2.14
RRP40Q08285 PEP1YBL017C 4740 nt1.69□□□□□ -2.14
RRP40Q08285 KAR9YPL269W 1935 nt1.68□□□□□ -2.14
RRP40Q08285 NIC96YFR002W 2520 nt1.68□□□□□ -2.14
RRP40Q08285 NCB2YDR397C 441 nt1.68□□□□□ -2.14
RRP40Q08285 SDL1YIL167W 633 nt1.68□□□□□ -2.14
RRP40Q08285 YIR020C-BYIR020C-B 735 nt1.68□□□□□ -2.14
RRP40Q08285 SNC1YAL030W 354 nt1.68□□□□□ -2.14
RRP40Q08285 YKR075W-AYKR075W-A 270 nt1.68□□□□□ -2.14
RRP40Q08285 ATG38YLR211C 681 nt1.68□□□□□ -2.14
RRP40Q08285 YLR217WYLR217W 324 nt1.68□□□□□ -2.14
RRP40Q08285 URA5YML106W 681 nt1.68□□□□□ -2.14
RRP40Q08285 SFG1YOR315W 1041 nt1.68□□□□□ -2.14
RRP40Q08285 MGA2YIR033W 3342 nt1.68□□□□□ -2.14
RRP40Q08285 NCS2YNL119W 1482 nt1.68□□□□□ -2.14
RRP40Q08285 YLR035C-AYLR035C-A 3468 nt1.67□□□□□ -2.14
RRP40Q08285 CDC53YDL132W 2448 nt1.67□□□□□ -2.14
RRP40Q08285 YCR100CYCR100C 951 nt1.67□□□□□ -2.14
RRP40Q08285 UBC5YDR059C 447 nt1.67□□□□□ -2.14
RRP40Q08285 FMP16YDR070C 282 nt1.67□□□□□ -2.14
RRP40Q08285 TSA2YDR453C 591 nt1.67□□□□□ -2.14
RRP40Q08285 PRS3YHL011C 963 nt1.67□□□□□ -2.14
RRP40Q08285 YAL066WYAL066W 309 nt1.67□□□□□ -2.14
RRP40Q08285 YLR198CYLR198C 360 nt1.67□□□□□ -2.14
RRP40Q08285 RIO2YNL207W 1278 nt1.67□□□□□ -2.14
RRP40Q08285 TOA1YOR194C 861 nt1.67□□□□□ -2.14
RRP40Q08285 LEU3YLR451W 2661 nt1.67□□□□□ -2.14
RRP40Q08285 TRL1YJL087C 2484 nt1.66□□□□□ -2.14
RRP40Q08285 IRA1YBR140C 9279 nt1.66□□□□□ -2.14
RRP40Q08285 DAD1YDR016C 285 nt1.66□□□□□ -2.14
RRP40Q08285 YJL133C-AYJL133C-A 225 nt1.66□□□□□ -2.14
RRP40Q08285 RAM2YKL019W 951 nt1.66□□□□□ -2.14
RRP40Q08285 YPT6YLR262C 648 nt1.66□□□□□ -2.14
RRP40Q08285 YOR333CYOR333C 417 nt1.66□□□□□ -2.14
RRP40Q08285 ADF1YCL058W-A 342 nt1.66□□□□□ -2.14
RRP40Q08285 NAN1YPL126W 2691 nt1.66□□□□□ -2.14
RRP40Q08285 VPS38YLR360W 1320 nt1.66□□□□□ -2.14
RRP40Q08285 YJL070CYJL070C 2667 nt1.65□□□□□ -2.14
RRP40Q08285 RTP1YMR185W 2946 nt1.65□□□□□ -2.14
RRP40Q08285 YDR248CYDR248C 582 nt1.65□□□□□ -2.15
RRP40Q08285 LIN1YHR156C 1023 nt1.65□□□□□ -2.15
RRP40Q08285 HYR1YIR037W 492 nt1.65□□□□□ -2.15
RRP40Q08285 YLR053CYLR053C 327 nt1.65□□□□□ -2.15
RRP40Q08285 HHT2YNL031C 411 nt1.65□□□□□ -2.15
RRP40Q08285 YNL179CYNL179C 438 nt1.65□□□□□ -2.15
RRP40Q08285 YPL034WYPL034W 498 nt1.65□□□□□ -2.15
RRP40Q08285 PTC5YOR090C 1719 nt1.65□□□□□ -2.15
RRP40Q08285 TUS1YLR425W 3924 nt1.64□□□□□ -2.15
RRP40Q08285 CDC50YCR094W 1176 nt1.64□□□□□ -2.15
RRP40Q08285 VPS74YDR372C 1038 nt1.64□□□□□ -2.15
RRP40Q08285 YJR023CYJR023C 402 nt1.64□□□□□ -2.15
RRP40Q08285 YML084WYML084W 309 nt1.64□□□□□ -2.15
RRP40Q08285 YMR247W-AYMR247W-A 144 nt1.64□□□□□ -2.15
RRP40Q08285 CFT2YLR115W 2580 nt1.64□□□□□ -2.15
RRP40Q08285 LHS1YKL073W 2646 nt1.64□□□□□ -2.15
RRP40Q08285 MNE1YOR350C 1992 nt1.63□□□□□ -2.15
RRP40Q08285 snR59snR59 78 nt1.63□□□□□ -2.15
RRP40Q08285 AHC2YCR082W 387 nt1.63□□□□□ -2.15
RRP40Q08285 MSL1YIR009W 336 nt1.63□□□□□ -2.15
RRP40Q08285 YJL147CYJL147C 1149 nt1.63□□□□□ -2.15
RRP40Q08285 SRP21YKL122C 504 nt1.63□□□□□ -2.15
RRP40Q08285 OST2YOR103C 393 nt1.63□□□□□ -2.15
RRP40Q08285 YDR261W-AYDR261W-A 1317 nt1.63□□□□□ -2.15
RRP40Q08285 PKH3YDR466W 2697 nt1.63□□□□□ -2.15
RRP40Q08285 PBP4YDL053C 558 nt1.62□□□□□ -2.15
RRP40Q08285 YDR115WYDR115W 318 nt1.62□□□□□ -2.15
RRP40Q08285 IRC4YDR540C 540 nt1.62□□□□□ -2.15
RRP40Q08285 RSM18YER050C 417 nt1.62□□□□□ -2.15
RRP40Q08285 YGL024WYGL024W 336 nt1.62□□□□□ -2.15
RRP40Q08285 YGL042CYGL042C 306 nt1.62□□□□□ -2.15
RRP40Q08285 YIP1YGR172C 747 nt1.62□□□□□ -2.15
RRP40Q08285 RPA34YJL148W 702 nt1.62□□□□□ -2.15
RRP40Q08285 YLR458WYLR458W 381 nt1.62□□□□□ -2.15
RRP40Q08285 LSM2YBL026W 288 nt1.62□□□□□ -2.15
RRP40Q08285 LSM7YNL147W 348 nt1.62□□□□□ -2.15
RRP40Q08285 IRC10YOL015W 1761 nt1.62□□□□□ -2.15
RRP40Q08285 NCL1YBL024W 2055 nt1.62□□□□□ -2.15
RRP40Q08285 CAT2YML042W 2013 nt1.61□□□□□ -2.15
RRP40Q08285 YDL025W-AYDL025W-A 105 nt1.61□□□□□ -2.15
RRP40Q08285 RPL37BYDR500C 267 nt1.61□□□□□ -2.15
RRP40Q08285 YGL014C-AYGL014C-A 162 nt1.61□□□□□ -2.15
RRP40Q08285 FSH1YHR049W 732 nt1.61□□□□□ -2.15
RRP40Q08285 NOP10YHR072W-A 177 nt1.61□□□□□ -2.15
RRP40Q08285 RPL40AYIL148W 387 nt1.61□□□□□ -2.15
RRP40Q08285 ERG29YMR134W 714 nt1.61□□□□□ -2.15
RRP40Q08285 DCP1YOL149W 696 nt1.61□□□□□ -2.15
RRP40Q08285 POP7YBR167C 423 nt1.61□□□□□ -2.15
RRP40Q08285 TRS20YBR254C 528 nt1.61□□□□□ -2.15
RRP40Q08285 NDD1YOR372C 1665 nt1.61□□□□□ -2.15
RRP40Q08285 SHE4YOR035C 2370 nt1.61□□□□□ -2.15
RRP40Q08285 CFT1YDR301W 4074 nt1.61□□□□□ -2.15
RRP40Q08285 BFA1YJR053W 1725 nt1.6□□□□□ -2.15
RRP40Q08285 RAD6YGL058W 519 nt1.6□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 80 ms