RNA–Protein interactions for RNA: YDR261W-A

YDR261W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YDR261W-A, Length 1,317 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261W-AYDR261W-A MTC1P47018 478 aaKnown RBP14.74□□□□□ -0.05
YDR261W-AYDR261W-A DRS1P32892 752 aaKnown RBP14.21□□□□□ -0.13
YDR261W-AYDR261W-A FAP1P53971 965 aa13.43□□□□□ -0.26
YDR261W-AYDR261W-A PRY3P47033 881 aa12.66□□□□□ -0.38
YDR261W-AYDR261W-A DIP2Q12220 943 aaPredicted RBP12.31□□□□□ -0.44
YDR261W-AYDR261W-A PRI1P10363 409 aa12.27□□□□□ -0.45
YDR261W-AYDR261W-A AAD16Q02895 342 aa12.25□□□□□ -0.45
YDR261W-AYDR261W-A ISW2Q08773 1120 aa12.09□□□□□ -0.47
YDR261W-AYDR261W-A BFR2Q06631 534 aaKnown RBP12.03□□□□□ -0.48
YDR261W-AYDR261W-A AVT3P36062 692 aa12.01□□□□□ -0.49
YDR261W-AYDR261W-A YCK3P39962 524 aa12□□□□□ -0.49
YDR261W-AYDR261W-A RPG1P38249 964 aaKnown RBP11.98□□□□□ -0.49
YDR261W-AYDR261W-A HAA1Q12753 694 aaKnown RBP11.84□□□□□ -0.51
YDR261W-AYDR261W-A RSE1Q04693 1361 aaKnown RBP11.75□□□□□ -0.53
YDR261W-AYDR261W-A TSR3Q12094 313 aaKnown RBP11.55□□□□□ -0.56
YDR261W-AYDR261W-A RPL17AP05740 184 aaKnown RBP11.37□□□□□ -0.59
YDR261W-AYDR261W-A RPL17BP46990 184 aaKnown RBP11.37□□□□□ -0.59
YDR261W-AYDR261W-A REB1P21538 810 aa11.24□□□□□ -0.61
YDR261W-AYDR261W-A MRPL32P25348 183 aa11.08□□□□□ -0.64
YDR261W-AYDR261W-A SPT21P35209 758 aa10.93□□□□□ -0.66
YDR261W-AYDR261W-A TFA1P36100 482 aa10.93□□□□□ -0.66
YDR261W-AYDR261W-A YGL015CP33199 130 aa10.82□□□□□ -0.68
YDR261W-AYDR261W-A YKR023WP36119 530 aaKnown RBP10.72□□□□□ -0.69
YDR261W-AYDR261W-A RIM101P33400 625 aa10.66□□□□□ -0.7
YDR261W-AYDR261W-A CDC27P38042 758 aa10.64□□□□□ -0.71
YDR261W-AYDR261W-A HOP09932 586 aa10.5□□□□□ -0.73
YDR261W-AYDR261W-A TFC8Q12308 588 aa10.49□□□□□ -0.73
YDR261W-AYDR261W-A DCD1P06773 312 aa10.44□□□□□ -0.74
YDR261W-AYDR261W-A OXP1P28273 1286 aa10.33□□□□□ -0.76
YDR261W-AYDR261W-A BUD31P25337 157 aaPredicted RBP10.25□□□□□ -0.77
YDR261W-AYDR261W-A MAP2P38174 421 aaKnown RBP10.24□□□□□ -0.77
YDR261W-AYDR261W-A UBP10P53874 792 aaPredicted RBP10.22□□□□□ -0.77
YDR261W-AYDR261W-A BCH2P36122 765 aa10.17□□□□□ -0.78
YDR261W-AYDR261W-A YIL055CP40523 627 aaKnown RBP10.12□□□□□ -0.79
YDR261W-AYDR261W-A SCY1P53009 804 aa10.1□□□□□ -0.79
YDR261W-AYDR261W-A PTP3P40048 928 aa10.08□□□□□ -0.8
YDR261W-AYDR261W-A YAH1Q12184 172 aaKnown RBP10.06□□□□□ -0.8
YDR261W-AYDR261W-A RSM7P47150 247 aa9.99□□□□□ -0.81
YDR261W-AYDR261W-A SLX5P32828 619 aaKnown RBP9.93□□□□□ -0.82
YDR261W-AYDR261W-A EPS1P40557 701 aa9.93□□□□□ -0.82
YDR261W-AYDR261W-A YLR271WQ06152 274 aa9.93□□□□□ -0.82
YDR261W-AYDR261W-A SSP1P38871 571 aa9.9□□□□□ -0.82
YDR261W-AYDR261W-A BDF1P35817 686 aa9.89□□□□□ -0.83
YDR261W-AYDR261W-A AI2P03876 854 aa9.86□□□□□ -0.83
YDR261W-AYDR261W-A BBC1P47068 1157 aa9.8□□□□□ -0.84
YDR261W-AYDR261W-A TIF4632P39936 914 aaKnown RBP9.78□□□□□ -0.84
YDR261W-AYDR261W-A TGL3P40308 642 aa9.76□□□□□ -0.85
YDR261W-AYDR261W-A ARP8Q12386 881 aaKnown RBP RIP-Chip data9.75□□□□□ -0.85not detected
YDR261W-AYDR261W-A PSD2P53037 1138 aaKnown RBP9.72□□□□□ -0.85
YDR261W-AYDR261W-A SIS1P25294 352 aaKnown RBP9.66□□□□□ -0.86
YDR261W-AYDR261W-A UBP9P39967 754 aa9.65□□□□□ -0.86
YDR261W-AYDR261W-A CST9Q06032 482 aa9.61□□□□□ -0.87
YDR261W-AYDR261W-A MGA2P40578 1113 aa9.6□□□□□ -0.87
YDR261W-AYDR261W-A MRM1P25270 412 aa9.54□□□□□ -0.88
YDR261W-AYDR261W-A NSR1P27476 414 aaKnown RBP RIP-Chip data9.45□□□□□ -0.9not detected
YDR261W-AYDR261W-A MST1P07236 462 aa9.42□□□□□ -0.9
YDR261W-AYDR261W-A YOR238WQ08634 303 aa9.4□□□□□ -0.9
YDR261W-AYDR261W-A YAP5P40574 245 aa9.39□□□□□ -0.91
YDR261W-AYDR261W-A RTG3P38165 486 aa9.35□□□□□ -0.91
YDR261W-AYDR261W-A RCR1P38212 213 aa9.34□□□□□ -0.91
YDR261W-AYDR261W-A VPS29P38759 282 aa9.34□□□□□ -0.91
YDR261W-AYDR261W-A PIB1Q06651 286 aa9.28□□□□□ -0.92
YDR261W-AYDR261W-A YMR1P47147 688 aaKnown RBP RIP-Chip data9.25□□□□□ -0.93not detected
YDR261W-AYDR261W-A YBL029C-AQ3E756 94 aa9.24□□□□□ -0.93
YDR261W-AYDR261W-A DBP1P24784 617 aaKnown RBP9.22□□□□□ -0.93
YDR261W-AYDR261W-A STS1P38637 319 aa9.22□□□□□ -0.93
YDR261W-AYDR261W-A YFR006WP43590 535 aa9.21□□□□□ -0.94
YDR261W-AYDR261W-A RAM2P29703 316 aa9.18□□□□□ -0.94
YDR261W-AYDR261W-A GTT3P39996 337 aa9.14□□□□□ -0.95
YDR261W-AYDR261W-A VNX1P42839 908 aa9.12□□□□□ -0.95
YDR261W-AYDR261W-A WSC3Q12215 556 aa9.12□□□□□ -0.95
YDR261W-AYDR261W-A VMA1P17255 1071 aaKnown RBP9.07□□□□□ -0.96
YDR261W-AYDR261W-A MAK11P20484 414 aaKnown RBP9.05□□□□□ -0.96
YDR261W-AYDR261W-A SPP1Q03012 353 aa9.02□□□□□ -0.97
YDR261W-AYDR261W-A SAM3Q08986 587 aa9.01□□□□□ -0.97
YDR261W-AYDR261W-A YOL036WQ08206 761 aa9□□□□□ -0.97
YDR261W-AYDR261W-A TIF11P38912 153 aaKnown RBP8.98□□□□□ -0.97
YDR261W-AYDR261W-A SET4P42948 560 aa8.98□□□□□ -0.97
YDR261W-AYDR261W-A EDS1P38073 919 aa8.96□□□□□ -0.98
YDR261W-AYDR261W-A COQ8P27697 501 aa8.95□□□□□ -0.98
YDR261W-AYDR261W-A MIF2P35201 549 aa8.95□□□□□ -0.98
YDR261W-AYDR261W-A MSB4Q12317 492 aa8.95□□□□□ -0.98
YDR261W-AYDR261W-A ULI1P43604 169 aa8.92□□□□□ -0.98
YDR261W-AYDR261W-A IOC2Q12072 812 aa8.91□□□□□ -0.98
YDR261W-AYDR261W-A AIR2Q12476 344 aaKnown RBP8.91□□□□□ -0.98
YDR261W-AYDR261W-A GYP5Q12344 894 aa8.89□□□□□ -0.99
YDR261W-AYDR261W-A PTC3P34221 468 aaKnown RBP8.88□□□□□ -0.99
YDR261W-AYDR261W-A EAP1P36041 632 aaKnown RBP8.87□□□□□ -0.99
YDR261W-AYDR261W-A FKH1P40466 484 aa8.87□□□□□ -0.99
YDR261W-AYDR261W-A TRP5P00931 707 aaKnown RBP8.86□□□□□ -0.99
YDR261W-AYDR261W-A DCW1P36091 449 aa8.83□□□□□ -1
YDR261W-AYDR261W-A LDB19Q12502 818 aa8.83□□□□□ -1
YDR261W-AYDR261W-A SET1P38827 1080 aaKnown RBP8.82□□□□□ -1
YDR261W-AYDR261W-A YJL171CP46992 396 aa8.82□□□□□ -1
YDR261W-AYDR261W-A GRE2Q12068 342 aaKnown RBP8.82□□□□□ -1
YDR261W-AYDR261W-A ABP1P15891 592 aaKnown RBP8.8□□□□□ -1
YDR261W-AYDR261W-A NOP53Q12080 455 aaKnown RBP8.8□□□□□ -1
YDR261W-AYDR261W-A DMA1P38823 416 aa8.8□□□□□ -1
YDR261W-AYDR261W-A ATH1P48016 1211 aa8.79□□□□□ -1
YDR261W-AYDR261W-A HTA1P04911 132 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms