RNA–Protein interactions for RNA: YDR115W

YDR115W, Transcript of Putative mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene YDR115W, Length 318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR115WYDR115W MTC1P47018 478 aaKnown RBP10.64□□□□□ -0.71
YDR115WYDR115W DRS1P32892 752 aaKnown RBP10.47□□□□□ -0.73
YDR115WYDR115W BFR2Q06631 534 aaKnown RBP8.99□□□□□ -0.97
YDR115WYDR115W DIP2Q12220 943 aaPredicted RBP8.97□□□□□ -0.97
YDR115WYDR115W FAP1P53971 965 aa8.9□□□□□ -0.98
YDR115WYDR115W AVT3P36062 692 aa8.81□□□□□ -1
YDR115WYDR115W ISW2Q08773 1120 aa8.72□□□□□ -1.01
YDR115WYDR115W PRI1P10363 409 aa8.63□□□□□ -1.03
YDR115WYDR115W RPG1P38249 964 aaKnown RBP8.55□□□□□ -1.04
YDR115WYDR115W RSE1Q04693 1361 aaKnown RBP8.55□□□□□ -1.04
YDR115WYDR115W AAD16Q02895 342 aa8.52□□□□□ -1.05
YDR115WYDR115W TFA1P36100 482 aa8.34□□□□□ -1.07
YDR115WYDR115W PRY3P47033 881 aa8.32□□□□□ -1.08
YDR115WYDR115W RPL17AP05740 184 aaKnown RBP8.21□□□□□ -1.1
YDR115WYDR115W RPL17BP46990 184 aaKnown RBP8.21□□□□□ -1.1
YDR115WYDR115W REB1P21538 810 aa8.15□□□□□ -1.1
YDR115WYDR115W TSR3Q12094 313 aaKnown RBP8.15□□□□□ -1.1
YDR115WYDR115W SPT21P35209 758 aa7.91□□□□□ -1.14
YDR115WYDR115W HAA1Q12753 694 aaKnown RBP7.91□□□□□ -1.14
YDR115WYDR115W MRPL32P25348 183 aa7.89□□□□□ -1.15
YDR115WYDR115W YCK3P39962 524 aa7.82□□□□□ -1.16
YDR115WYDR115W RIM101P33400 625 aa7.76□□□□□ -1.17
YDR115WYDR115W YKR023WP36119 530 aaKnown RBP7.66□□□□□ -1.18
YDR115WYDR115W CDC27P38042 758 aa7.54□□□□□ -1.2
YDR115WYDR115W TFC8Q12308 588 aa7.53□□□□□ -1.2
YDR115WYDR115W HOP09932 586 aa7.48□□□□□ -1.21
YDR115WYDR115W OXP1P28273 1286 aa7.47□□□□□ -1.21
YDR115WYDR115W YGL015CP33199 130 aa7.42□□□□□ -1.22
YDR115WYDR115W YIL055CP40523 627 aaKnown RBP7.42□□□□□ -1.22
YDR115WYDR115W DCD1P06773 312 aa7.41□□□□□ -1.22
YDR115WYDR115W PTP3P40048 928 aa7.38□□□□□ -1.23
YDR115WYDR115W UBP10P53874 792 aaPredicted RBP7.36□□□□□ -1.23
YDR115WYDR115W SSP1P38871 571 aa7.34□□□□□ -1.23
YDR115WYDR115W YAH1Q12184 172 aaKnown RBP7.34□□□□□ -1.23
YDR115WYDR115W RSM7P47150 247 aa7.3□□□□□ -1.24
YDR115WYDR115W BCH2P36122 765 aa7.29□□□□□ -1.24
YDR115WYDR115W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
YDR115WYDR115W MAP2P38174 421 aaKnown RBP7.25□□□□□ -1.25
YDR115WYDR115W YLR271WQ06152 274 aa7.25□□□□□ -1.25
YDR115WYDR115W SCY1P53009 804 aa7.22□□□□□ -1.25
YDR115WYDR115W BBC1P47068 1157 aa7.19□□□□□ -1.26
YDR115WYDR115W AI2P03876 854 aa7.18□□□□□ -1.26
YDR115WYDR115W EPS1P40557 701 aa7.17□□□□□ -1.26
YDR115WYDR115W SLX5P32828 619 aaKnown RBP7.13□□□□□ -1.27
YDR115WYDR115W MGA2P40578 1113 aa7.12□□□□□ -1.27
YDR115WYDR115W BDF1P35817 686 aa7.11□□□□□ -1.27
YDR115WYDR115W PSD2P53037 1138 aaKnown RBP7.1□□□□□ -1.27
YDR115WYDR115W TIF4632P39936 914 aaKnown RBP7.05□□□□□ -1.28
YDR115WYDR115W CST9Q06032 482 aa7.01□□□□□ -1.29
YDR115WYDR115W TGL3P40308 642 aa6.98□□□□□ -1.29
YDR115WYDR115W RQC2Q12532 1038 aaKnown RBP6.98□□□□□ -1.29
YDR115WYDR115W MRM1P25270 412 aa6.94□□□□□ -1.3
YDR115WYDR115W NSR1P27476 414 aaKnown RBP RIP-Chip data6.9□□□□□ -1.3 RIP-Chip
YDR115WYDR115W RTG3P38165 486 aa6.87□□□□□ -1.31
YDR115WYDR115W YAP5P40574 245 aa6.82□□□□□ -1.32
YDR115WYDR115W RCR1P38212 213 aa6.77□□□□□ -1.33
YDR115WYDR115W VPS29P38759 282 aa6.77□□□□□ -1.33
YDR115WYDR115W YMR1P47147 688 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
YDR115WYDR115W YOR238WQ08634 303 aa6.77□□□□□ -1.33
YDR115WYDR115W MST1P07236 462 aa6.75□□□□□ -1.33
YDR115WYDR115W DMA1P38823 416 aa6.75□□□□□ -1.33
YDR115WYDR115W RAM2P29703 316 aa6.74□□□□□ -1.33
YDR115WYDR115W MAK11P20484 414 aaKnown RBP6.72□□□□□ -1.33
YDR115WYDR115W DBP1P24784 617 aaKnown RBP6.7□□□□□ -1.34
YDR115WYDR115W STS1P38637 319 aa6.68□□□□□ -1.34
YDR115WYDR115W GTT3P39996 337 aa6.65□□□□□ -1.34
YDR115WYDR115W YFR006WP43590 535 aa6.64□□□□□ -1.35
YDR115WYDR115W UBP9P39967 754 aa6.63□□□□□ -1.35
YDR115WYDR115W PIB1Q06651 286 aa6.63□□□□□ -1.35
YDR115WYDR115W VMA1P17255 1071 aaKnown RBP6.61□□□□□ -1.35
YDR115WYDR115W NOP53Q12080 455 aaKnown RBP6.6□□□□□ -1.35
YDR115WYDR115W COQ8P27697 501 aa6.59□□□□□ -1.35
YDR115WYDR115W SET1P38827 1080 aaKnown RBP6.59□□□□□ -1.35
YDR115WYDR115W MIF2P35201 549 aa6.58□□□□□ -1.36
YDR115WYDR115W IFH1P39520 1085 aa6.57□□□□□ -1.36
YDR115WYDR115W SAM3Q08986 587 aa6.57□□□□□ -1.36
YDR115WYDR115W BUD31P25337 157 aaPredicted RBP6.54□□□□□ -1.36
YDR115WYDR115W EDS1P38073 919 aa6.54□□□□□ -1.36
YDR115WYDR115W MSB4Q12317 492 aa6.54□□□□□ -1.36
YDR115WYDR115W ABP1P15891 592 aaKnown RBP6.53□□□□□ -1.36
YDR115WYDR115W PTC3P34221 468 aaKnown RBP6.51□□□□□ -1.37
YDR115WYDR115W YOL036WQ08206 761 aa6.51□□□□□ -1.37
YDR115WYDR115W SAS10Q12136 610 aaPredicted RBP6.51□□□□□ -1.37
YDR115WYDR115W YBL029C-AQ3E756 94 aa6.51□□□□□ -1.37
YDR115WYDR115W YPR148CQ06523 435 aa6.5□□□□□ -1.37
YDR115WYDR115W WSC3Q12215 556 aa6.5□□□□□ -1.37
YDR115WYDR115W VNX1P42839 908 aa6.49□□□□□ -1.37
YDR115WYDR115W GRE2Q12068 342 aaKnown RBP6.49□□□□□ -1.37
YDR115WYDR115W GYP5Q12344 894 aa6.49□□□□□ -1.37
YDR115WYDR115W EAP1P36041 632 aaKnown RBP6.48□□□□□ -1.37
YDR115WYDR115W ATH1P48016 1211 aa6.48□□□□□ -1.37
YDR115WYDR115W SET4P42948 560 aa6.47□□□□□ -1.37
YDR115WYDR115W GUT1P32190 709 aa6.46□□□□□ -1.38
YDR115WYDR115W TIF11P38912 153 aaKnown RBP6.45□□□□□ -1.38
YDR115WYDR115W SPP1Q03012 353 aa6.45□□□□□ -1.38
YDR115WYDR115W HTA1P04911 132 aaKnown RBP6.43□□□□□ -1.38
YDR115WYDR115W HTA2P04912 132 aa6.43□□□□□ -1.38
YDR115WYDR115W CKB1P43639 278 aa6.42□□□□□ -1.38
YDR115WYDR115W DCW1P36091 449 aa6.4□□□□□ -1.38
YDR115WYDR115W ULI1P43604 169 aa6.4□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms