Protein–RNA interactions for Protein: Q07478

SUB2, ATP-dependent RNA helicase SUB2, yeastyeast

Known RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB2Q07478 YPL229WYPL229W 621 nt4.06□□□□□ -1.76
SUB2Q07478 YJL181WYJL181W 1836 nt4.06□□□□□ -1.76
SUB2Q07478 ENA5YDR038C 3276 nt4.06□□□□□ -1.76
SUB2Q07478 ENA2YDR039C 3276 nt4.06□□□□□ -1.76
SUB2Q07478 ENA1YDR040C 3276 nt4.06□□□□□ -1.76
SUB2Q07478 PSK1YAL017W 4071 nt4.05□□□□□ -1.76
SUB2Q07478 YDL242WYDL242W 354 nt4.05□□□□□ -1.76
SUB2Q07478 PEX4YGR133W 552 nt4.05□□□□□ -1.76
SUB2Q07478 YLR458WYLR458W 381 nt4.05□□□□□ -1.76
SUB2Q07478 TSC11YER093C 4293 nt4.05□□□□□ -1.76
SUB2Q07478 SRP72YPL210C 1923 nt4.05□□□□□ -1.76
SUB2Q07478 REV1YOR346W 2958 nt4.05□□□□□ -1.76
SUB2Q07478 AKR1YDR264C 2295 nt4.04□□□□□ -1.76
SUB2Q07478 MTC3YGL226W 372 nt4.04□□□□□ -1.76
SUB2Q07478 YAR070CYAR070C 300 nt4.04□□□□□ -1.76
SUB2Q07478 ATP15YPL271W 189 nt4.04□□□□□ -1.76
SUB2Q07478 YAT2YER024W 2772 nt4.04□□□□□ -1.76
SUB2Q07478 RPA135YPR010C 3612 nt4.03□□□□□ -1.76
SUB2Q07478 SKT5YBL061C 2091 nt4.03□□□□□ -1.76
SUB2Q07478 YDR169C-AYDR169C-A 150 nt4.03□□□□□ -1.76
SUB2Q07478 RPL8BYLL045C 771 nt4.03□□□□□ -1.76
SUB2Q07478 YLR031WYLR031W 561 nt4.03□□□□□ -1.76
SUB2Q07478 FCF2YLR051C 654 nt4.03□□□□□ -1.76
SUB2Q07478 KAP95YLR347C 2586 nt4.03□□□□□ -1.77
SUB2Q07478 VTC4YJL012C 2166 nt4.02□□□□□ -1.77
SUB2Q07478 HOP2YGL033W 657 nt4.02□□□□□ -1.77
SUB2Q07478 RAD2YGR258C 3096 nt4.02□□□□□ -1.77
SUB2Q07478 NPR3YHL023C 3441 nt4.01□□□□□ -1.77
SUB2Q07478 TRK1YJL129C 3708 nt4.01□□□□□ -1.77
SUB2Q07478 snR79snR79 84 nt4.01□□□□□ -1.77
SUB2Q07478 AAD16YFL057C 459 nt4.01□□□□□ -1.77
SUB2Q07478 AYR1YIL124W 894 nt4.01□□□□□ -1.77
SUB2Q07478 RAM2YKL019W 951 nt4.01□□□□□ -1.77
SUB2Q07478 ISF1YMR081C 1017 nt4.01□□□□□ -1.77
SUB2Q07478 PSO2YMR137C 1986 nt4.01□□□□□ -1.77
SUB2Q07478 IRC10YOL015W 1761 nt4.01□□□□□ -1.77
SUB2Q07478 NOT5YPR072W 1683 nt4□□□□□ -1.77
SUB2Q07478 TLC1TLC1 1301 nt4□□□□□ -1.77
SUB2Q07478 TFC1YBR123C 1950 nt4□□□□□ -1.77
SUB2Q07478 TIM11YDR322C-A 291 nt4□□□□□ -1.77
SUB2Q07478 YEL057CYEL057C 702 nt4□□□□□ -1.77
SUB2Q07478 YGR174W-AYGR174W-A 87 nt4□□□□□ -1.77
SUB2Q07478 ECM22YLR228C 2445 nt4□□□□□ -1.77
SUB2Q07478 RPO31YOR116C 4383 nt4□□□□□ -1.77
SUB2Q07478 RPL30YGL030W 318 nt3.99□□□□□ -1.77
SUB2Q07478 GPI14YJR013W 1212 nt3.99□□□□□ -1.77
SUB2Q07478 TRM7YBR061C 933 nt3.99□□□□□ -1.77
SUB2Q07478 ARO1YDR127W 4767 nt3.99□□□□□ -1.77
SUB2Q07478 DOA4YDR069C 2781 nt3.99□□□□□ -1.77
SUB2Q07478 CDC24YAL041W 2565 nt3.99□□□□□ -1.77
SUB2Q07478 MZM1YDR493W 372 nt3.98□□□□□ -1.77
SUB2Q07478 PSY1YKL076C 384 nt3.98□□□□□ -1.77
SUB2Q07478 YKR033CYKR033C 426 nt3.98□□□□□ -1.77
SUB2Q07478 RPL26AYLR344W 384 nt3.98□□□□□ -1.77
SUB2Q07478 YPR010C-AYPR010C-A 219 nt3.98□□□□□ -1.77
SUB2Q07478 PUF4YGL014W 2667 nt3.98□□□□□ -1.77
SUB2Q07478 YCF1YDR135C 4548 nt3.98□□□□□ -1.77
SUB2Q07478 RKM1YPL208W 1752 nt3.97□□□□□ -1.77
SUB2Q07478 YPR022CYPR022C 3402 nt3.97□□□□□ -1.77
SUB2Q07478 DAD4YDR320C-A 219 nt3.97□□□□□ -1.77
SUB2Q07478 YFL063WYFL063W 456 nt3.97□□□□□ -1.77
SUB2Q07478 HSK3YKL138C-A 210 nt3.97□□□□□ -1.77
SUB2Q07478 CCW14YLR390W-A 717 nt3.97□□□□□ -1.77
SUB2Q07478 MTC4YBR255W 2085 nt3.97□□□□□ -1.77
SUB2Q07478 VPS64YDR200C 1815 nt3.96□□□□□ -1.78
SUB2Q07478 PSY2YNL201C 2577 nt3.96□□□□□ -1.78
SUB2Q07478 SPG3YDR504C 384 nt3.96□□□□□ -1.78
SUB2Q07478 GCN4YEL009C 846 nt3.96□□□□□ -1.78
SUB2Q07478 RPL40AYIL148W 387 nt3.96□□□□□ -1.78
SUB2Q07478 YMR122W-AYMR122W-A 255 nt3.96□□□□□ -1.78
SUB2Q07478 ITC1YGL133W 3795 nt3.96□□□□□ -1.78
SUB2Q07478 AIM9YER080W 1884 nt3.96□□□□□ -1.78
SUB2Q07478 PIM1YBL022C 3402 nt3.95□□□□□ -1.78
SUB2Q07478 DSE4YNR067C 3354 nt3.95□□□□□ -1.78
SUB2Q07478 YER121WYER121W 345 nt3.95□□□□□ -1.78
SUB2Q07478 YNL010WYNL010W 726 nt3.95□□□□□ -1.78
SUB2Q07478 PRK1YIL095W 2433 nt3.95□□□□□ -1.78
SUB2Q07478 DUF1YOL087C 3351 nt3.94□□□□□ -1.78
SUB2Q07478 tK(UUU)DtK(UUU)D 73 nt3.94□□□□□ -1.78
SUB2Q07478 tK(UUU)G1tK(UUU)G1 73 nt3.94□□□□□ -1.78
SUB2Q07478 tK(UUU)G2tK(UUU)G2 73 nt3.94□□□□□ -1.78
SUB2Q07478 tK(UUU)KtK(UUU)K 73 nt3.94□□□□□ -1.78
SUB2Q07478 tK(UUU)LtK(UUU)L 73 nt3.94□□□□□ -1.78
SUB2Q07478 tK(UUU)OtK(UUU)O 73 nt3.94□□□□□ -1.78
SUB2Q07478 tK(UUU)PtK(UUU)P 73 nt3.94□□□□□ -1.78
SUB2Q07478 YBR085C-AYBR085C-A 258 nt3.94□□□□□ -1.78
SUB2Q07478 YBR197CYBR197C 654 nt3.94□□□□□ -1.78
SUB2Q07478 PUF6YDR496C 1971 nt3.93□□□□□ -1.78
SUB2Q07478 SMC3YJL074C 3693 nt3.93□□□□□ -1.78
SUB2Q07478 snR76snR76 109 nt3.93□□□□□ -1.78
SUB2Q07478 YHR007C-AYHR007C-A 216 nt3.93□□□□□ -1.78
SUB2Q07478 TCP1YDR212W 1680 nt3.93□□□□□ -1.78
SUB2Q07478 SRO7YPR032W 3102 nt3.92□□□□□ -1.78
SUB2Q07478 WIP1YDR374W-A 270 nt3.92□□□□□ -1.78
SUB2Q07478 RPS24AYER074W 408 nt3.92□□□□□ -1.78
SUB2Q07478 YPR146CYPR146C 330 nt3.92□□□□□ -1.78
SUB2Q07478 SWH1YAR042W 3567 nt3.92□□□□□ -1.78
SUB2Q07478 YGL239CYGL239C 315 nt3.91□□□□□ -1.78
SUB2Q07478 RPL14BYHL001W 417 nt3.91□□□□□ -1.78
SUB2Q07478 YJL020W-AYJL020W-A 258 nt3.91□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 65.2 ms