Protein–RNA interactions for Protein: P50875

SPT20, Transcription factor SPT20, yeastyeast

Predictions only

Length 604 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT20P50875 RPL23AYBL087C 414 nt3.33□□□□□ -1.88
SPT20P50875 YBR137WYBR137W 540 nt3.33□□□□□ -1.88
SPT20P50875 YBR178WYBR178W 375 nt3.33□□□□□ -1.88
SPT20P50875 ISM1YPL040C 3009 nt3.33□□□□□ -1.88
SPT20P50875 BNA4YBL098W 1383 nt3.33□□□□□ -1.88
SPT20P50875 CWH41YGL027C 2502 nt3.33□□□□□ -1.88
SPT20P50875 MVP1YMR004W 1536 nt3.33□□□□□ -1.88
SPT20P50875 SPT10YJL127C 1923 nt3.32□□□□□ -1.88
SPT20P50875 SSM4YIL030C 3960 nt3.32□□□□□ -1.88
SPT20P50875 YER088C-AYER088C-A 324 nt3.32□□□□□ -1.88
SPT20P50875 tV(CAC)DtV(CAC)D 73 nt3.32□□□□□ -1.88
SPT20P50875 tV(CAC)HtV(CAC)H 73 nt3.32□□□□□ -1.88
SPT20P50875 TMA22YJR014W 597 nt3.32□□□□□ -1.88
SPT20P50875 TIM8YJR135W-A 264 nt3.32□□□□□ -1.88
SPT20P50875 YOR302WYOR302W 78 nt3.32□□□□□ -1.88
SPT20P50875 RPL36BYPL249C-A 303 nt3.32□□□□□ -1.88
SPT20P50875 MDN1YLR106C 14733 nt3.31□□□□□ -1.88
SPT20P50875 JEN1YKL217W 1851 nt3.31□□□□□ -1.88
SPT20P50875 PRP39YML046W 1890 nt3.31□□□□□ -1.88
SPT20P50875 DBP6YNR038W 1890 nt3.31□□□□□ -1.88
SPT20P50875 snR55snR55 98 nt3.31□□□□□ -1.88
SPT20P50875 YDR048CYDR048C 315 nt3.31□□□□□ -1.88
SPT20P50875 FRQ1YDR373W 573 nt3.31□□□□□ -1.88
SPT20P50875 TSA2YDR453C 591 nt3.31□□□□□ -1.88
SPT20P50875 YIL102CYIL102C 306 nt3.31□□□□□ -1.88
SPT20P50875 TMA19YKL056C 504 nt3.31□□□□□ -1.88
SPT20P50875 YMR194C-AYMR194C-A 225 nt3.31□□□□□ -1.88
SPT20P50875 ISU1YPL135W 498 nt3.31□□□□□ -1.88
SPT20P50875 YBR197CYBR197C 654 nt3.31□□□□□ -1.88
SPT20P50875 TMA108YIL137C 2841 nt3.31□□□□□ -1.88
SPT20P50875 NAN1YPL126W 2691 nt3.31□□□□□ -1.88
SPT20P50875 SYT1YPR095C 3681 nt3.31□□□□□ -1.88
SPT20P50875 GPI13YLL031C 3054 nt3.3□□□□□ -1.88
SPT20P50875 COG8YML071C 1824 nt3.3□□□□□ -1.88
SPT20P50875 SLP1YOR154W 1764 nt3.3□□□□□ -1.88
SPT20P50875 CCT7YJL111W 1653 nt3.3□□□□□ -1.88
SPT20P50875 BMS1YPL217C 3552 nt3.3□□□□□ -1.88
SPT20P50875 SHQ1YIL104C 1524 nt3.3□□□□□ -1.88
SPT20P50875 HPA3YEL066W 540 nt3.3□□□□□ -1.88
SPT20P50875 HTB2YBL002W 396 nt3.3□□□□□ -1.88
SPT20P50875 CPA2YJR109C 3357 nt3.3□□□□□ -1.88
SPT20P50875 JJJ2YJL162C 1752 nt3.3□□□□□ -1.88
SPT20P50875 ZDS2YML109W 2829 nt3.29□□□□□ -1.88
SPT20P50875 MSD1YPL104W 1977 nt3.29□□□□□ -1.88
SPT20P50875 RPS24AYER074W 408 nt3.29□□□□□ -1.88
SPT20P50875 GPG1YGL121C 381 nt3.29□□□□□ -1.88
SPT20P50875 YGR174W-AYGR174W-A 87 nt3.29□□□□□ -1.88
SPT20P50875 YJL135WYJL135W 318 nt3.29□□□□□ -1.88
SPT20P50875 SRL3YKR091W 741 nt3.29□□□□□ -1.88
SPT20P50875 TPS2YDR074W 2691 nt3.29□□□□□ -1.88
SPT20P50875 MPS1YDL028C 2295 nt3.28□□□□□ -1.88
SPT20P50875 ARO1YDR127W 4767 nt3.28□□□□□ -1.88
SPT20P50875 LCB5YLR260W 2064 nt3.28□□□□□ -1.88
SPT20P50875 PWP2YCR057C 2772 nt3.28□□□□□ -1.88
SPT20P50875 YGL052WYGL052W 306 nt3.28□□□□□ -1.88
SPT20P50875 HSK3YKL138C-A 210 nt3.28□□□□□ -1.88
SPT20P50875 SHH3YMR118C 591 nt3.28□□□□□ -1.88
SPT20P50875 snR48snR48 113 nt3.28□□□□□ -1.88
SPT20P50875 YPR022CYPR022C 3402 nt3.28□□□□□ -1.88
SPT20P50875 YIL032CYIL032C 357 nt3.27□□□□□ -1.89
SPT20P50875 YMR172C-AYMR172C-A 384 nt3.27□□□□□ -1.89
SPT20P50875 SLA1YBL007C 3735 nt3.27□□□□□ -1.89
SPT20P50875 RRN6YBL014C 2685 nt3.26□□□□□ -1.89
SPT20P50875 SMC3YJL074C 3693 nt3.26□□□□□ -1.89
SPT20P50875 VPS41YDR080W 2979 nt3.26□□□□□ -1.89
SPT20P50875 YHL042WYHL042W 453 nt3.26□□□□□ -1.89
SPT20P50875 PEX11YOL147C 711 nt3.26□□□□□ -1.89
SPT20P50875 HEM4YOR278W 828 nt3.26□□□□□ -1.89
SPT20P50875 YPR108W-AYPR108W-A 213 nt3.26□□□□□ -1.89
SPT20P50875 CWC22YGR278W 1734 nt3.26□□□□□ -1.89
SPT20P50875 STN1YDR082W 1485 nt3.26□□□□□ -1.89
SPT20P50875 TRZ1YKR079C 2517 nt3.25□□□□□ -1.89
SPT20P50875 SEA4YBL104C 3117 nt3.25□□□□□ -1.89
SPT20P50875 FMP32YFL046W 624 nt3.25□□□□□ -1.89
SPT20P50875 YJL020W-AYJL020W-A 258 nt3.25□□□□□ -1.89
SPT20P50875 YPL182CYPL182C 384 nt3.25□□□□□ -1.89
SPT20P50875 ATP15YPL271W 189 nt3.25□□□□□ -1.89
SPT20P50875 YDR089WYDR089W 2610 nt3.24□□□□□ -1.89
SPT20P50875 SMT3YDR510W 306 nt3.24□□□□□ -1.89
SPT20P50875 MTC3YGL226W 372 nt3.24□□□□□ -1.89
SPT20P50875 NCE101YJL205C 162 nt3.24□□□□□ -1.89
SPT20P50875 YKR033CYKR033C 426 nt3.24□□□□□ -1.89
SPT20P50875 YMR141W-AYMR141W-A 225 nt3.24□□□□□ -1.89
SPT20P50875 REV1YOR346W 2958 nt3.24□□□□□ -1.89
SPT20P50875 RRP5YMR229C 5190 nt3.24□□□□□ -1.89
SPT20P50875 VIK1YPL253C 1944 nt3.24□□□□□ -1.89
SPT20P50875 TRS120YDR407C 3870 nt3.24□□□□□ -1.89
SPT20P50875 FAA2YER015W 2235 nt3.24□□□□□ -1.89
SPT20P50875 AIM9YER080W 1884 nt3.24□□□□□ -1.89
SPT20P50875 FLO9YAL063C 3969 nt3.24□□□□□ -1.89
SPT20P50875 RED1YLR263W 2484 nt3.24□□□□□ -1.89
SPT20P50875 MUS81YDR386W 1899 nt3.23□□□□□ -1.89
SPT20P50875 RPS8AYBL072C 603 nt3.23□□□□□ -1.89
SPT20P50875 RAD4YER162C 2265 nt3.22□□□□□ -1.89
SPT20P50875 YGR237CYGR237C 2358 nt3.22□□□□□ -1.89
SPT20P50875 YEL032C-AYEL032C-A 162 nt3.22□□□□□ -1.89
SPT20P50875 AIM11YER093C-A 414 nt3.22□□□□□ -1.89
SPT20P50875 YGR164WYGR164W 336 nt3.22□□□□□ -1.89
SPT20P50875 RPL32YBL092W 393 nt3.22□□□□□ -1.89
SPT20P50875 SWD3YBR175W 948 nt3.22□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 178.8 ms