Protein–RNA interactions for Protein: P0C2J1

TY1B-PR3, Transposon Ty1-PR3 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR3P0C2J1 MED8YBR193C 672 nt0.85□□□□□ -2.27
TY1B-PR3P0C2J1 SWI6YLR182W 2412 nt0.85□□□□□ -2.27
TY1B-PR3P0C2J1 EMT1tM(CAU)D 73 nt0.85□□□□□ -2.27
TY1B-PR3P0C2J1 EMT5tM(CAU)J1 73 nt0.85□□□□□ -2.27
TY1B-PR3P0C2J1 EMT3tM(CAU)J2 73 nt0.85□□□□□ -2.27
TY1B-PR3P0C2J1 EMT4tM(CAU)M 73 nt0.85□□□□□ -2.27
TY1B-PR3P0C2J1 EMT2tM(CAU)O2 73 nt0.85□□□□□ -2.27
TY1B-PR3P0C2J1 CCL1YPR025C 1182 nt0.85□□□□□ -2.27
TY1B-PR3P0C2J1 MON1YGL124C 1935 nt0.85□□□□□ -2.27
TY1B-PR3P0C2J1 UBP11YKR098C 2154 nt0.84□□□□□ -2.27
TY1B-PR3P0C2J1 SPO74YGL170C 1242 nt0.84□□□□□ -2.27
TY1B-PR3P0C2J1 PRM4YPL156C 855 nt0.84□□□□□ -2.27
TY1B-PR3P0C2J1 snR76snR76 109 nt0.83□□□□□ -2.28
TY1B-PR3P0C2J1 VTI1YMR197C 654 nt0.83□□□□□ -2.28
TY1B-PR3P0C2J1 YPL238CYPL238C 390 nt0.83□□□□□ -2.28
TY1B-PR3P0C2J1 APC2YLR127C 2562 nt0.83□□□□□ -2.28
TY1B-PR3P0C2J1 PUF4YGL014W 2667 nt0.83□□□□□ -2.28
TY1B-PR3P0C2J1 RRP6YOR001W 2202 nt0.83□□□□□ -2.28
TY1B-PR3P0C2J1 PBP4YDL053C 558 nt0.83□□□□□ -2.28
TY1B-PR3P0C2J1 MSS2YDL107W 1056 nt0.83□□□□□ -2.28
TY1B-PR3P0C2J1 CRD1YDL142C 852 nt0.83□□□□□ -2.28
TY1B-PR3P0C2J1 YLR379WYLR379W 375 nt0.83□□□□□ -2.28
TY1B-PR3P0C2J1 YMR052C-AYMR052C-A 366 nt0.83□□□□□ -2.28
TY1B-PR3P0C2J1 AVT5YBL089W 1380 nt0.83□□□□□ -2.28
TY1B-PR3P0C2J1 NUP145YGL092W 3954 nt0.82□□□□□ -2.28
TY1B-PR3P0C2J1 RTG3YBL103C 1461 nt0.82□□□□□ -2.28
TY1B-PR3P0C2J1 SEC1YDR164C 2175 nt0.82□□□□□ -2.28
TY1B-PR3P0C2J1 BST1YFL025C 3090 nt0.82□□□□□ -2.28
TY1B-PR3P0C2J1 BEM3YPL115C 3387 nt0.81□□□□□ -2.28
TY1B-PR3P0C2J1 ERV14YGL054C 417 nt0.81□□□□□ -2.28
TY1B-PR3P0C2J1 YKL177WYKL177W 339 nt0.81□□□□□ -2.28
TY1B-PR3P0C2J1 ALY2YJL084C 3141 nt0.81□□□□□ -2.28
TY1B-PR3P0C2J1 PRK1YIL095W 2433 nt0.81□□□□□ -2.28
TY1B-PR3P0C2J1 FMN1YDR236C 657 nt0.8□□□□□ -2.28
TY1B-PR3P0C2J1 RPL37BYDR500C 267 nt0.8□□□□□ -2.28
TY1B-PR3P0C2J1 GLC7YER133W 939 nt0.8□□□□□ -2.28
TY1B-PR3P0C2J1 VOA1YGR106C 798 nt0.8□□□□□ -2.28
TY1B-PR3P0C2J1 RPS18BYML026C 441 nt0.8□□□□□ -2.28
TY1B-PR3P0C2J1 CPR3YML078W 549 nt0.8□□□□□ -2.28
TY1B-PR3P0C2J1 CTK3YML112W 891 nt0.8□□□□□ -2.28
TY1B-PR3P0C2J1 YRO2YBR054W 1035 nt0.8□□□□□ -2.28
TY1B-PR3P0C2J1 YGR273CYGR273C 525 nt0.8□□□□□ -2.28
TY1B-PR3P0C2J1 SNC1YAL030W 354 nt0.8□□□□□ -2.28
TY1B-PR3P0C2J1 YMR031W-AYMR031W-A 327 nt0.8□□□□□ -2.28
TY1B-PR3P0C2J1 DYN3YMR299C 939 nt0.8□□□□□ -2.28
TY1B-PR3P0C2J1 HHT2YNL031C 411 nt0.8□□□□□ -2.28
TY1B-PR3P0C2J1 ATG5YPL149W 885 nt0.8□□□□□ -2.28
TY1B-PR3P0C2J1 YMR31YFR049W 372 nt0.79□□□□□ -2.28
TY1B-PR3P0C2J1 ACB1YGR037C 264 nt0.79□□□□□ -2.28
TY1B-PR3P0C2J1 YNL144W-AYNL144W-A 84 nt0.79□□□□□ -2.28
TY1B-PR3P0C2J1 BAG7YOR134W 1230 nt0.79□□□□□ -2.28
TY1B-PR3P0C2J1 PEX27YOR193W 1131 nt0.79□□□□□ -2.28
TY1B-PR3P0C2J1 PIN3YPR154W 648 nt0.79□□□□□ -2.28
TY1B-PR3P0C2J1 FUS1YCL027W 1539 nt0.79□□□□□ -2.28
TY1B-PR3P0C2J1 POL4YCR014C 1749 nt0.79□□□□□ -2.28
TY1B-PR3P0C2J1 YDR132CYDR132C 1488 nt0.78□□□□□ -2.28
TY1B-PR3P0C2J1 MSS4YDR208W 2340 nt0.78□□□□□ -2.28
TY1B-PR3P0C2J1 SHS1YDL225W 1656 nt0.78□□□□□ -2.29
TY1B-PR3P0C2J1 UBC9YDL064W 474 nt0.78□□□□□ -2.29
TY1B-PR3P0C2J1 YER078W-AYER078W-A 165 nt0.78□□□□□ -2.29
TY1B-PR3P0C2J1 YNR066CYNR066C 1311 nt0.77□□□□□ -2.29
TY1B-PR3P0C2J1 AEP3YPL005W 1821 nt0.77□□□□□ -2.29
TY1B-PR3P0C2J1 UBC5YDR059C 447 nt0.77□□□□□ -2.29
TY1B-PR3P0C2J1 BTT1YDR252W 450 nt0.77□□□□□ -2.29
TY1B-PR3P0C2J1 NBL1YHR199C-A 222 nt0.77□□□□□ -2.29
TY1B-PR3P0C2J1 EST2YLR318W 2655 nt0.76□□□□□ -2.29
TY1B-PR3P0C2J1 CKA1YIL035C 1119 nt0.76□□□□□ -2.29
TY1B-PR3P0C2J1 HSE1YHL002W 1359 nt0.76□□□□□ -2.29
TY1B-PR3P0C2J1 RNH202YDR279W 1053 nt0.75□□□□□ -2.29
TY1B-PR3P0C2J1 YLR400WYLR400W 474 nt0.75□□□□□ -2.29
TY1B-PR3P0C2J1 MPD1YOR288C 957 nt0.75□□□□□ -2.29
TY1B-PR3P0C2J1 YDR018CYDR018C 1191 nt0.75□□□□□ -2.29
TY1B-PR3P0C2J1 RGI2YIL057C 495 nt0.75□□□□□ -2.29
TY1B-PR3P0C2J1 SHR3YDL212W 633 nt0.74□□□□□ -2.29
TY1B-PR3P0C2J1 YER107W-AYER107W-A 321 nt0.74□□□□□ -2.29
TY1B-PR3P0C2J1 PUS9YDL036C 1389 nt0.74□□□□□ -2.29
TY1B-PR3P0C2J1 ATP16YDL004W 483 nt0.73□□□□□ -2.29
TY1B-PR3P0C2J1 MRPL25YGR076C 474 nt0.73□□□□□ -2.29
TY1B-PR3P0C2J1 ESA1YOR244W 1338 nt0.73□□□□□ -2.29
TY1B-PR3P0C2J1 YDL026WYDL026W 312 nt0.73□□□□□ -2.29
TY1B-PR3P0C2J1 YGR190CYGR190C 366 nt0.73□□□□□ -2.29
TY1B-PR3P0C2J1 SPC42YKL042W 1092 nt0.73□□□□□ -2.29
TY1B-PR3P0C2J1 SRN2YLR119W 642 nt0.73□□□□□ -2.29
TY1B-PR3P0C2J1 LST4YKL176C 2487 nt0.73□□□□□ -2.29
TY1B-PR3P0C2J1 PPN1YDR452W 2025 nt0.72□□□□□ -2.29
TY1B-PR3P0C2J1 MNE1YOR350C 1992 nt0.72□□□□□ -2.29
TY1B-PR3P0C2J1 YOR203WYOR203W 354 nt0.72□□□□□ -2.29
TY1B-PR3P0C2J1 SRL1YOR247W 633 nt0.72□□□□□ -2.29
TY1B-PR3P0C2J1 YLR149CYLR149C 2193 nt0.72□□□□□ -2.29
TY1B-PR3P0C2J1 CLG1YGL215W 1359 nt0.71□□□□□ -2.3
TY1B-PR3P0C2J1 PAF1YBR279W 1338 nt0.71□□□□□ -2.3
TY1B-PR3P0C2J1 RMD5YDR255C 1266 nt0.71□□□□□ -2.3
TY1B-PR3P0C2J1 YDR320W-BYDR320W-B 138 nt0.71□□□□□ -2.3
TY1B-PR3P0C2J1 YLR444CYLR444C 303 nt0.71□□□□□ -2.3
TY1B-PR3P0C2J1 KAP122YGL016W 3246 nt0.71□□□□□ -2.3
TY1B-PR3P0C2J1 HLR1YDR528W 1272 nt0.7□□□□□ -2.3
TY1B-PR3P0C2J1 YLR307C-AYLR307C-A 264 nt0.7□□□□□ -2.3
TY1B-PR3P0C2J1 CTL1YMR180C 963 nt0.7□□□□□ -2.3
TY1B-PR3P0C2J1 LRS4YDR439W 1044 nt0.7□□□□□ -2.3
TY1B-PR3P0C2J1 YGR064WYGR064W 369 nt0.7□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 42.1 ms