RNA–Protein interactions for RNA: YMR180C

CTL1, Transcript of RNA 5'-triphosphatase, localizes to both the nucleus and cytoplasm, yeastyeast

Gene CTL1, Length 963 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTL1YMR180C MTC1P47018 478 aaKnown RBP16.37■□□□□ 0.21
CTL1YMR180C DRS1P32892 752 aaKnown RBP16.18■□□□□ 0.18
CTL1YMR180C BFR2Q06631 534 aaKnown RBP13.87□□□□□ -0.19
CTL1YMR180C DIP2Q12220 943 aaPredicted RBP13.87□□□□□ -0.19
CTL1YMR180C FAP1P53971 965 aa13.73□□□□□ -0.21
CTL1YMR180C AVT3P36062 692 aa13.63□□□□□ -0.23
CTL1YMR180C ISW2Q08773 1120 aa13.34□□□□□ -0.27
CTL1YMR180C PRI1P10363 409 aa13.32□□□□□ -0.28
CTL1YMR180C RPG1P38249 964 aaKnown RBP13.23□□□□□ -0.29
CTL1YMR180C RSE1Q04693 1361 aaKnown RBP13.15□□□□□ -0.3
CTL1YMR180C AAD16Q02895 342 aa13.11□□□□□ -0.31
CTL1YMR180C PRY3P47033 881 aa12.88□□□□□ -0.35
CTL1YMR180C TFA1P36100 482 aa12.86□□□□□ -0.35
CTL1YMR180C RPL17AP05740 184 aaKnown RBP12.7□□□□□ -0.38
CTL1YMR180C RPL17BP46990 184 aaKnown RBP12.7□□□□□ -0.38
CTL1YMR180C TSR3Q12094 313 aaKnown RBP12.66□□□□□ -0.38
CTL1YMR180C REB1P21538 810 aa12.52□□□□□ -0.41
CTL1YMR180C YCK3P39962 524 aa12.28□□□□□ -0.44
CTL1YMR180C SPT21P35209 758 aa12.22□□□□□ -0.45
CTL1YMR180C MRPL32P25348 183 aa12.11□□□□□ -0.47
CTL1YMR180C HAA1Q12753 694 aaKnown RBP12.1□□□□□ -0.47
CTL1YMR180C RIM101P33400 625 aa11.99□□□□□ -0.49
CTL1YMR180C YKR023WP36119 530 aaKnown RBP11.91□□□□□ -0.5
CTL1YMR180C CDC27P38042 758 aa11.73□□□□□ -0.53
CTL1YMR180C HOP09932 586 aa11.66□□□□□ -0.54
CTL1YMR180C OXP1P28273 1286 aa11.64□□□□□ -0.55
CTL1YMR180C TFC8Q12308 588 aa11.64□□□□□ -0.55
CTL1YMR180C DCD1P06773 312 aa11.6□□□□□ -0.55
CTL1YMR180C PTP3P40048 928 aa11.42□□□□□ -0.58
CTL1YMR180C YIL055CP40523 627 aaKnown RBP11.41□□□□□ -0.58
CTL1YMR180C YAH1Q12184 172 aaKnown RBP11.41□□□□□ -0.58
CTL1YMR180C YGL015CP33199 130 aa11.35□□□□□ -0.59
CTL1YMR180C BCH2P36122 765 aa11.31□□□□□ -0.6
CTL1YMR180C SSP1P38871 571 aa11.31□□□□□ -0.6
CTL1YMR180C RSM7P47150 247 aa11.26□□□□□ -0.61
CTL1YMR180C YLR271WQ06152 274 aa11.26□□□□□ -0.61
CTL1YMR180C MAP2P38174 421 aaKnown RBP11.24□□□□□ -0.61
CTL1YMR180C UBP10P53874 792 aaPredicted RBP11.19□□□□□ -0.62
CTL1YMR180C SCY1P53009 804 aa11.17□□□□□ -0.62
CTL1YMR180C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.12□□□□□ -0.63not detected
CTL1YMR180C AI2P03876 854 aa11.09□□□□□ -0.63
CTL1YMR180C EPS1P40557 701 aa11.08□□□□□ -0.64
CTL1YMR180C BDF1P35817 686 aa11.01□□□□□ -0.65
CTL1YMR180C BBC1P47068 1157 aa10.99□□□□□ -0.65
CTL1YMR180C PSD2P53037 1138 aaKnown RBP10.98□□□□□ -0.65
CTL1YMR180C SLX5P32828 619 aaKnown RBP10.94□□□□□ -0.66
CTL1YMR180C MGA2P40578 1113 aa10.93□□□□□ -0.66
CTL1YMR180C CST9Q06032 482 aa10.92□□□□□ -0.66
CTL1YMR180C MRM1P25270 412 aa10.75□□□□□ -0.69
CTL1YMR180C TIF4632P39936 914 aaKnown RBP10.71□□□□□ -0.69
CTL1YMR180C TGL3P40308 642 aa10.67□□□□□ -0.7
CTL1YMR180C RCR1P38212 213 aa10.58□□□□□ -0.72
CTL1YMR180C RTG3P38165 486 aa10.54□□□□□ -0.72
CTL1YMR180C DMA1P38823 416 aa10.51□□□□□ -0.73
CTL1YMR180C VPS29P38759 282 aa10.5□□□□□ -0.73
CTL1YMR180C RAM2P29703 316 aa10.48□□□□□ -0.73
CTL1YMR180C RQC2Q12532 1038 aaKnown RBP10.47□□□□□ -0.73
CTL1YMR180C NSR1P27476 414 aaKnown RBP RIP-Chip data10.45□□□□□ -0.74not detected
CTL1YMR180C YAP5P40574 245 aa10.41□□□□□ -0.74
CTL1YMR180C YMR1P47147 688 aaKnown RBP RIP-Chip data10.38□□□□□ -0.75not detected
CTL1YMR180C YOR238WQ08634 303 aa10.37□□□□□ -0.75
CTL1YMR180C STS1P38637 319 aa10.36□□□□□ -0.75
CTL1YMR180C YFR006WP43590 535 aa10.35□□□□□ -0.75
CTL1YMR180C PIB1Q06651 286 aa10.35□□□□□ -0.75
CTL1YMR180C MST1P07236 462 aa10.34□□□□□ -0.75
CTL1YMR180C DBP1P24784 617 aaKnown RBP10.34□□□□□ -0.75
CTL1YMR180C MAK11P20484 414 aaKnown RBP10.29□□□□□ -0.76
CTL1YMR180C COQ8P27697 501 aa10.17□□□□□ -0.78
CTL1YMR180C VMA1P17255 1071 aaKnown RBP10.16□□□□□ -0.78
CTL1YMR180C SET1P38827 1080 aaKnown RBP10.16□□□□□ -0.78
CTL1YMR180C MIF2P35201 549 aa10.15□□□□□ -0.78
CTL1YMR180C EDS1P38073 919 aa10.15□□□□□ -0.78
CTL1YMR180C GTT3P39996 337 aa10.13□□□□□ -0.79
CTL1YMR180C SAM3Q08986 587 aa10.06□□□□□ -0.8
CTL1YMR180C WSC3Q12215 556 aa10.06□□□□□ -0.8
CTL1YMR180C YBL029C-AQ3E756 94 aa10.06□□□□□ -0.8
CTL1YMR180C PTC3P34221 468 aaKnown RBP10.04□□□□□ -0.8
CTL1YMR180C UBP9P39967 754 aa10.04□□□□□ -0.8
CTL1YMR180C BUD31P25337 157 aaPredicted RBP10.02□□□□□ -0.81
CTL1YMR180C SAS10Q12136 610 aaPredicted RBP10.01□□□□□ -0.81
CTL1YMR180C YOL036WQ08206 761 aa10□□□□□ -0.81
CTL1YMR180C NOP53Q12080 455 aaKnown RBP10□□□□□ -0.81
CTL1YMR180C VNX1P42839 908 aa9.99□□□□□ -0.81
CTL1YMR180C SET4P42948 560 aa9.98□□□□□ -0.81
CTL1YMR180C GYP5Q12344 894 aa9.96□□□□□ -0.82
CTL1YMR180C YPR148CQ06523 435 aa9.95□□□□□ -0.82
CTL1YMR180C GRE2Q12068 342 aaKnown RBP9.94□□□□□ -0.82
CTL1YMR180C MSB4Q12317 492 aa9.92□□□□□ -0.82
CTL1YMR180C IFH1P39520 1085 aa9.91□□□□□ -0.82
CTL1YMR180C VPS70P47161 811 aa9.91□□□□□ -0.82
CTL1YMR180C ATH1P48016 1211 aa9.9□□□□□ -0.82
CTL1YMR180C GUT1P32190 709 aa9.89□□□□□ -0.83
CTL1YMR180C DCW1P36091 449 aa9.88□□□□□ -0.83
CTL1YMR180C SPP1Q03012 353 aa9.88□□□□□ -0.83
CTL1YMR180C TIF11P38912 153 aaKnown RBP9.87□□□□□ -0.83
CTL1YMR180C ULI1P43604 169 aa9.83□□□□□ -0.84
CTL1YMR180C ABP1P15891 592 aaKnown RBP9.82□□□□□ -0.84
CTL1YMR180C SOL3P38858 249 aa9.82□□□□□ -0.84
CTL1YMR180C TRP5P00931 707 aaKnown RBP9.81□□□□□ -0.84
CTL1YMR180C HTA1P04911 132 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms