RNA–Protein interactions for RNA: YLR119W

SRN2, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene SRN2, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRN2YLR119W MTC1P47018 478 aaKnown RBP22.42■■□□□ 1.18
SRN2YLR119W DRS1P32892 752 aaKnown RBP21.64■■□□□ 1.05
SRN2YLR119W FAP1P53971 965 aa19.41■□□□□ 0.7
SRN2YLR119W DIP2Q12220 943 aaPredicted RBP18.71■□□□□ 0.59
SRN2YLR119W PRI1P10363 409 aa18.5■□□□□ 0.55
SRN2YLR119W ISW2Q08773 1120 aa18.44■□□□□ 0.54
SRN2YLR119W BFR2Q06631 534 aaKnown RBP18.33■□□□□ 0.52
SRN2YLR119W AAD16Q02895 342 aa18.29■□□□□ 0.52
SRN2YLR119W AVT3P36062 692 aa18.23■□□□□ 0.51
SRN2YLR119W RPG1P38249 964 aaKnown RBP18.21■□□□□ 0.51
SRN2YLR119W PRY3P47033 881 aa18.21■□□□□ 0.51
SRN2YLR119W RSE1Q04693 1361 aaKnown RBP17.9■□□□□ 0.46
SRN2YLR119W TSR3Q12094 313 aaKnown RBP17.53■□□□□ 0.4
SRN2YLR119W RPL17AP05740 184 aaKnown RBP17.29■□□□□ 0.36
SRN2YLR119W RPL17BP46990 184 aaKnown RBP17.29■□□□□ 0.36
SRN2YLR119W YCK3P39962 524 aa17.19■□□□□ 0.34
SRN2YLR119W REB1P21538 810 aa17.16■□□□□ 0.34
SRN2YLR119W HAA1Q12753 694 aaKnown RBP17.1■□□□□ 0.33
SRN2YLR119W MRPL32P25348 183 aa16.83■□□□□ 0.28
SRN2YLR119W SPT21P35209 758 aa16.61■□□□□ 0.25
SRN2YLR119W TFA1P36100 482 aa16.61■□□□□ 0.25
SRN2YLR119W YKR023WP36119 530 aaKnown RBP16.24■□□□□ 0.19
SRN2YLR119W RIM101P33400 625 aa16.15■□□□□ 0.18
SRN2YLR119W CDC27P38042 758 aa16.13■□□□□ 0.17
SRN2YLR119W HOP09932 586 aa15.92■□□□□ 0.14
SRN2YLR119W YGL015CP33199 130 aa15.92■□□□□ 0.14
SRN2YLR119W TFC8Q12308 588 aa15.91■□□□□ 0.14
SRN2YLR119W DCD1P06773 312 aa15.85■□□□□ 0.13
SRN2YLR119W OXP1P28273 1286 aa15.62■□□□□ 0.09
SRN2YLR119W UBP10P53874 792 aaPredicted RBP15.59■□□□□ 0.09
SRN2YLR119W MAP2P38174 421 aaKnown RBP15.55■□□□□ 0.08
SRN2YLR119W BCH2P36122 765 aa15.41■□□□□ 0.06
SRN2YLR119W PTP3P40048 928 aa15.41■□□□□ 0.06
SRN2YLR119W YIL055CP40523 627 aaKnown RBP15.4■□□□□ 0.06
SRN2YLR119W SCY1P53009 804 aa15.37■□□□□ 0.05
SRN2YLR119W YAH1Q12184 172 aaKnown RBP15.3■□□□□ 0.04
SRN2YLR119W RSM7P47150 247 aa15.17■□□□□ 0.02
SRN2YLR119W SLX5P32828 619 aaKnown RBP15.13■□□□□ 0.01
SRN2YLR119W EPS1P40557 701 aa15.11■□□□□ 0.01
SRN2YLR119W YLR271WQ06152 274 aa15.05■□□□□ -0
SRN2YLR119W SSP1P38871 571 aa15.04■□□□□ -0
SRN2YLR119W BDF1P35817 686 aa15.01□□□□□ -0.01
SRN2YLR119W AI2P03876 854 aa14.99□□□□□ -0.01
SRN2YLR119W BBC1P47068 1157 aa14.96□□□□□ -0.01
SRN2YLR119W TIF4632P39936 914 aaKnown RBP14.94□□□□□ -0.02
SRN2YLR119W ARP8Q12386 881 aaKnown RBP RIP-Chip data14.9□□□□□ -0.02not detected
SRN2YLR119W TGL3P40308 642 aa14.83□□□□□ -0.04
SRN2YLR119W PSD2P53037 1138 aaKnown RBP14.77□□□□□ -0.05
SRN2YLR119W MGA2P40578 1113 aa14.61□□□□□ -0.07
SRN2YLR119W CST9Q06032 482 aa14.57□□□□□ -0.08
SRN2YLR119W MRM1P25270 412 aa14.5□□□□□ -0.09
SRN2YLR119W NSR1P27476 414 aaKnown RBP RIP-Chip data14.43□□□□□ -0.1not detected
SRN2YLR119W YAP5P40574 245 aa14.33□□□□□ -0.12
SRN2YLR119W YOR238WQ08634 303 aa14.31□□□□□ -0.12
SRN2YLR119W BUD31P25337 157 aaPredicted RBP14.3□□□□□ -0.12
SRN2YLR119W MST1P07236 462 aa14.28□□□□□ -0.12
SRN2YLR119W RTG3P38165 486 aa14.22□□□□□ -0.13
SRN2YLR119W UBP9P39967 754 aa14.18□□□□□ -0.14
SRN2YLR119W RCR1P38212 213 aa14.16□□□□□ -0.14
SRN2YLR119W VPS29P38759 282 aa14.13□□□□□ -0.15
SRN2YLR119W PIB1Q06651 286 aa14.1□□□□□ -0.15
SRN2YLR119W YMR1P47147 688 aaKnown RBP RIP-Chip data14.09□□□□□ -0.15not detected
SRN2YLR119W DBP1P24784 617 aaKnown RBP14□□□□□ -0.17
SRN2YLR119W STS1P38637 319 aa14□□□□□ -0.17
SRN2YLR119W GTT3P39996 337 aa14□□□□□ -0.17
SRN2YLR119W YBL029C-AQ3E756 94 aa14□□□□□ -0.17
SRN2YLR119W YFR006WP43590 535 aa13.99□□□□□ -0.17
SRN2YLR119W RAM2P29703 316 aa13.9□□□□□ -0.18
SRN2YLR119W WSC3Q12215 556 aa13.9□□□□□ -0.18
SRN2YLR119W VNX1P42839 908 aa13.85□□□□□ -0.19
SRN2YLR119W VMA1P17255 1071 aaKnown RBP13.82□□□□□ -0.2
SRN2YLR119W MAK11P20484 414 aaKnown RBP13.79□□□□□ -0.2
SRN2YLR119W SPP1Q03012 353 aa13.75□□□□□ -0.21
SRN2YLR119W YOL036WQ08206 761 aa13.7□□□□□ -0.22
SRN2YLR119W SIS1P25294 352 aaKnown RBP13.69□□□□□ -0.22
SRN2YLR119W SAM3Q08986 587 aa13.68□□□□□ -0.22
SRN2YLR119W TIF11P38912 153 aaKnown RBP13.67□□□□□ -0.22
SRN2YLR119W MSB4Q12317 492 aa13.67□□□□□ -0.22
SRN2YLR119W SET4P42948 560 aa13.66□□□□□ -0.22
SRN2YLR119W MIF2P35201 549 aa13.63□□□□□ -0.23
SRN2YLR119W COQ8P27697 501 aa13.59□□□□□ -0.23
SRN2YLR119W EDS1P38073 919 aa13.58□□□□□ -0.24
SRN2YLR119W ULI1P43604 169 aa13.57□□□□□ -0.24
SRN2YLR119W EAP1P36041 632 aaKnown RBP13.55□□□□□ -0.24
SRN2YLR119W GYP5Q12344 894 aa13.54□□□□□ -0.24
SRN2YLR119W PTC3P34221 468 aaKnown RBP13.49□□□□□ -0.25
SRN2YLR119W IOC2Q12072 812 aa13.49□□□□□ -0.25
SRN2YLR119W ABP1P15891 592 aaKnown RBP13.48□□□□□ -0.25
SRN2YLR119W TRP5P00931 707 aaKnown RBP13.47□□□□□ -0.25
SRN2YLR119W LDB19Q12502 818 aa13.47□□□□□ -0.25
SRN2YLR119W GRE2Q12068 342 aaKnown RBP13.46□□□□□ -0.25
SRN2YLR119W DCW1P36091 449 aa13.42□□□□□ -0.26
SRN2YLR119W HTA1P04911 132 aaKnown RBP13.4□□□□□ -0.26
SRN2YLR119W HTA2P04912 132 aa13.4□□□□□ -0.26
SRN2YLR119W SET1P38827 1080 aaKnown RBP13.4□□□□□ -0.26
SRN2YLR119W FKH1P40466 484 aa13.4□□□□□ -0.26
SRN2YLR119W ATH1P48016 1211 aa13.39□□□□□ -0.27
SRN2YLR119W NOP53Q12080 455 aaKnown RBP13.38□□□□□ -0.27
SRN2YLR119W GUT1P32190 709 aa13.35□□□□□ -0.27
SRN2YLR119W DMA1P38823 416 aa13.34□□□□□ -0.27
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms