RNA–Protein interactions for RNA: YDL004W

ATP16, Transcript of Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase, yeastyeast

Gene ATP16, Length 483 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATP16YDL004W MTC1P47018 478 aaKnown RBP14.58□□□□□ -0.08
ATP16YDL004W DRS1P32892 752 aaKnown RBP14.3□□□□□ -0.12
ATP16YDL004W FAP1P53971 965 aa12.49□□□□□ -0.41
ATP16YDL004W DIP2Q12220 943 aaPredicted RBP12.29□□□□□ -0.44
ATP16YDL004W BFR2Q06631 534 aaKnown RBP12.19□□□□□ -0.46
ATP16YDL004W AVT3P36062 692 aa11.99□□□□□ -0.49
ATP16YDL004W ISW2Q08773 1120 aa11.96□□□□□ -0.49
ATP16YDL004W PRI1P10363 409 aa11.94□□□□□ -0.5
ATP16YDL004W RPG1P38249 964 aaKnown RBP11.85□□□□□ -0.51
ATP16YDL004W AAD16Q02895 342 aa11.8□□□□□ -0.52
ATP16YDL004W PRY3P47033 881 aa11.71□□□□□ -0.53
ATP16YDL004W RSE1Q04693 1361 aaKnown RBP11.7□□□□□ -0.54
ATP16YDL004W TSR3Q12094 313 aaKnown RBP11.38□□□□□ -0.59
ATP16YDL004W RPL17AP05740 184 aaKnown RBP11.32□□□□□ -0.6
ATP16YDL004W RPL17BP46990 184 aaKnown RBP11.32□□□□□ -0.6
ATP16YDL004W REB1P21538 810 aa11.21□□□□□ -0.61
ATP16YDL004W TFA1P36100 482 aa11.14□□□□□ -0.63
ATP16YDL004W YCK3P39962 524 aa11.02□□□□□ -0.65
ATP16YDL004W HAA1Q12753 694 aaKnown RBP10.95□□□□□ -0.66
ATP16YDL004W MRPL32P25348 183 aa10.9□□□□□ -0.66
ATP16YDL004W SPT21P35209 758 aa10.82□□□□□ -0.68
ATP16YDL004W RIM101P33400 625 aa10.58□□□□□ -0.72
ATP16YDL004W YKR023WP36119 530 aaKnown RBP10.58□□□□□ -0.72
ATP16YDL004W CDC27P38042 758 aa10.48□□□□□ -0.73
ATP16YDL004W HOP09932 586 aa10.41□□□□□ -0.74
ATP16YDL004W DCD1P06773 312 aa10.36□□□□□ -0.75
ATP16YDL004W TFC8Q12308 588 aa10.36□□□□□ -0.75
ATP16YDL004W OXP1P28273 1286 aa10.28□□□□□ -0.76
ATP16YDL004W YGL015CP33199 130 aa10.24□□□□□ -0.77
ATP16YDL004W YIL055CP40523 627 aaKnown RBP10.14□□□□□ -0.79
ATP16YDL004W PTP3P40048 928 aa10.12□□□□□ -0.79
ATP16YDL004W YAH1Q12184 172 aaKnown RBP10.12□□□□□ -0.79
ATP16YDL004W MAP2P38174 421 aaKnown RBP10.08□□□□□ -0.8
ATP16YDL004W BCH2P36122 765 aa10.06□□□□□ -0.8
ATP16YDL004W UBP10P53874 792 aaPredicted RBP10.03□□□□□ -0.8
ATP16YDL004W SCY1P53009 804 aa10□□□□□ -0.81
ATP16YDL004W RSM7P47150 247 aa9.97□□□□□ -0.81
ATP16YDL004W SSP1P38871 571 aa9.95□□□□□ -0.82
ATP16YDL004W YLR271WQ06152 274 aa9.92□□□□□ -0.82
ATP16YDL004W EPS1P40557 701 aa9.86□□□□□ -0.83
ATP16YDL004W AI2P03876 854 aa9.83□□□□□ -0.84
ATP16YDL004W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.83□□□□□ -0.84not detected
ATP16YDL004W SLX5P32828 619 aaKnown RBP9.8□□□□□ -0.84
ATP16YDL004W BDF1P35817 686 aa9.79□□□□□ -0.84
ATP16YDL004W BBC1P47068 1157 aa9.79□□□□□ -0.84
ATP16YDL004W PSD2P53037 1138 aaKnown RBP9.68□□□□□ -0.86
ATP16YDL004W TIF4632P39936 914 aaKnown RBP9.64□□□□□ -0.87
ATP16YDL004W MGA2P40578 1113 aa9.63□□□□□ -0.87
ATP16YDL004W CST9Q06032 482 aa9.62□□□□□ -0.87
ATP16YDL004W TGL3P40308 642 aa9.56□□□□□ -0.88
ATP16YDL004W MRM1P25270 412 aa9.53□□□□□ -0.88
ATP16YDL004W RTG3P38165 486 aa9.34□□□□□ -0.91
ATP16YDL004W RCR1P38212 213 aa9.34□□□□□ -0.91
ATP16YDL004W YAP5P40574 245 aa9.3□□□□□ -0.92
ATP16YDL004W NSR1P27476 414 aaKnown RBP RIP-Chip data9.29□□□□□ -0.92 RIP-Chip
ATP16YDL004W YOR238WQ08634 303 aa9.28□□□□□ -0.92
ATP16YDL004W VPS29P38759 282 aa9.27□□□□□ -0.93
ATP16YDL004W PIB1Q06651 286 aa9.25□□□□□ -0.93
ATP16YDL004W YMR1P47147 688 aaKnown RBP RIP-Chip data9.22□□□□□ -0.93not detected
ATP16YDL004W MST1P07236 462 aa9.2□□□□□ -0.94
ATP16YDL004W YFR006WP43590 535 aa9.2□□□□□ -0.94
ATP16YDL004W DBP1P24784 617 aaKnown RBP9.19□□□□□ -0.94
ATP16YDL004W RAM2P29703 316 aa9.19□□□□□ -0.94
ATP16YDL004W STS1P38637 319 aa9.17□□□□□ -0.94
ATP16YDL004W GTT3P39996 337 aa9.11□□□□□ -0.95
ATP16YDL004W UBP9P39967 754 aa9.1□□□□□ -0.95
ATP16YDL004W BUD31P25337 157 aaPredicted RBP9.09□□□□□ -0.95
ATP16YDL004W DMA1P38823 416 aa9.08□□□□□ -0.96
ATP16YDL004W MAK11P20484 414 aaKnown RBP9.06□□□□□ -0.96
ATP16YDL004W WSC3Q12215 556 aa9.05□□□□□ -0.96
ATP16YDL004W YBL029C-AQ3E756 94 aa9.04□□□□□ -0.96
ATP16YDL004W VMA1P17255 1071 aaKnown RBP9.01□□□□□ -0.97
ATP16YDL004W MIF2P35201 549 aa8.99□□□□□ -0.97
ATP16YDL004W RQC2Q12532 1038 aaKnown RBP8.98□□□□□ -0.97
ATP16YDL004W COQ8P27697 501 aa8.96□□□□□ -0.98
ATP16YDL004W VNX1P42839 908 aa8.95□□□□□ -0.98
ATP16YDL004W EDS1P38073 919 aa8.94□□□□□ -0.98
ATP16YDL004W SET4P42948 560 aa8.91□□□□□ -0.98
ATP16YDL004W YOL036WQ08206 761 aa8.91□□□□□ -0.98
ATP16YDL004W SET1P38827 1080 aaKnown RBP8.9□□□□□ -0.98
ATP16YDL004W SAM3Q08986 587 aa8.9□□□□□ -0.98
ATP16YDL004W SPP1Q03012 353 aa8.89□□□□□ -0.99
ATP16YDL004W PTC3P34221 468 aaKnown RBP8.87□□□□□ -0.99
ATP16YDL004W GYP5Q12344 894 aa8.86□□□□□ -0.99
ATP16YDL004W TIF11P38912 153 aaKnown RBP8.84□□□□□ -0.99
ATP16YDL004W MSB4Q12317 492 aa8.84□□□□□ -0.99
ATP16YDL004W ULI1P43604 169 aa8.82□□□□□ -1
ATP16YDL004W GRE2Q12068 342 aaKnown RBP8.82□□□□□ -1
ATP16YDL004W DCW1P36091 449 aa8.8□□□□□ -1
ATP16YDL004W ATH1P48016 1211 aa8.79□□□□□ -1
ATP16YDL004W SIS1P25294 352 aaKnown RBP8.78□□□□□ -1
ATP16YDL004W EAP1P36041 632 aaKnown RBP8.77□□□□□ -1.01
ATP16YDL004W NOP53Q12080 455 aaKnown RBP8.77□□□□□ -1.01
ATP16YDL004W TRP5P00931 707 aaKnown RBP8.76□□□□□ -1.01
ATP16YDL004W GUT1P32190 709 aa8.74□□□□□ -1.01
ATP16YDL004W HTA1P04911 132 aaKnown RBP8.73□□□□□ -1.01
ATP16YDL004W HTA2P04912 132 aa8.73□□□□□ -1.01
ATP16YDL004W ABP1P15891 592 aaKnown RBP8.73□□□□□ -1.01
ATP16YDL004W IOC2Q12072 812 aa8.73□□□□□ -1.01
ATP16YDL004W LDB19Q12502 818 aa8.71□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms