RNA–Protein interactions for RNA: YBR279W

PAF1, Transcript of Component of the Paf1p complex involved in transcription elongation, yeastyeast

Gene PAF1, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAF1YBR279W DRS1P32892 752 aaKnown RBP16.11■□□□□ 0.17
PAF1YBR279W MTC1P47018 478 aaKnown RBP16.01■□□□□ 0.15
PAF1YBR279W BFR2Q06631 534 aaKnown RBP13.95□□□□□ -0.18
PAF1YBR279W DIP2Q12220 943 aaPredicted RBP13.71□□□□□ -0.21
PAF1YBR279W AVT3P36062 692 aa13.47□□□□□ -0.25
PAF1YBR279W FAP1P53971 965 aa13.22□□□□□ -0.29
PAF1YBR279W ISW2Q08773 1120 aa13.13□□□□□ -0.31
PAF1YBR279W TFA1P36100 482 aa13.09□□□□□ -0.31
PAF1YBR279W RSE1Q04693 1361 aaKnown RBP12.98□□□□□ -0.33
PAF1YBR279W RPG1P38249 964 aaKnown RBP12.87□□□□□ -0.35
PAF1YBR279W PRI1P10363 409 aa12.86□□□□□ -0.35
PAF1YBR279W AAD16Q02895 342 aa12.68□□□□□ -0.38
PAF1YBR279W RPL17AP05740 184 aaKnown RBP12.45□□□□□ -0.42
PAF1YBR279W RPL17BP46990 184 aaKnown RBP12.45□□□□□ -0.42
PAF1YBR279W REB1P21538 810 aa12.37□□□□□ -0.43
PAF1YBR279W PRY3P47033 881 aa12.33□□□□□ -0.44
PAF1YBR279W TSR3Q12094 313 aaKnown RBP12.2□□□□□ -0.46
PAF1YBR279W SPT21P35209 758 aa11.91□□□□□ -0.5
PAF1YBR279W MRPL32P25348 183 aa11.83□□□□□ -0.52
PAF1YBR279W RIM101P33400 625 aa11.8□□□□□ -0.52
PAF1YBR279W HAA1Q12753 694 aaKnown RBP11.69□□□□□ -0.54
PAF1YBR279W YKR023WP36119 530 aaKnown RBP11.53□□□□□ -0.56
PAF1YBR279W YCK3P39962 524 aa11.45□□□□□ -0.58
PAF1YBR279W PTP3P40048 928 aa11.41□□□□□ -0.58
PAF1YBR279W YIL055CP40523 627 aaKnown RBP11.39□□□□□ -0.59
PAF1YBR279W OXP1P28273 1286 aa11.37□□□□□ -0.59
PAF1YBR279W TFC8Q12308 588 aa11.34□□□□□ -0.59
PAF1YBR279W RQC2Q12532 1038 aaKnown RBP11.34□□□□□ -0.59
PAF1YBR279W HOP09932 586 aa11.33□□□□□ -0.6
PAF1YBR279W SSP1P38871 571 aa11.32□□□□□ -0.6
PAF1YBR279W YAH1Q12184 172 aaKnown RBP11.29□□□□□ -0.6
PAF1YBR279W CDC27P38042 758 aa11.28□□□□□ -0.6
PAF1YBR279W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.24□□□□□ -0.61not detected
PAF1YBR279W DCD1P06773 312 aa11.19□□□□□ -0.62
PAF1YBR279W RSM7P47150 247 aa11.14□□□□□ -0.63
PAF1YBR279W YLR271WQ06152 274 aa11.09□□□□□ -0.63
PAF1YBR279W YGL015CP33199 130 aa11.04□□□□□ -0.64
PAF1YBR279W BCH2P36122 765 aa11□□□□□ -0.65
PAF1YBR279W BBC1P47068 1157 aa10.97□□□□□ -0.65
PAF1YBR279W AI2P03876 854 aa10.94□□□□□ -0.66
PAF1YBR279W MGA2P40578 1113 aa10.94□□□□□ -0.66
PAF1YBR279W UBP10P53874 792 aaPredicted RBP10.94□□□□□ -0.66
PAF1YBR279W SCY1P53009 804 aa10.86□□□□□ -0.67
PAF1YBR279W MAP2P38174 421 aaKnown RBP10.84□□□□□ -0.67
PAF1YBR279W EPS1P40557 701 aa10.84□□□□□ -0.67
PAF1YBR279W PSD2P53037 1138 aaKnown RBP10.81□□□□□ -0.68
PAF1YBR279W DMA1P38823 416 aa10.77□□□□□ -0.69
PAF1YBR279W BDF1P35817 686 aa10.75□□□□□ -0.69
PAF1YBR279W CST9Q06032 482 aa10.74□□□□□ -0.69
PAF1YBR279W SLX5P32828 619 aaKnown RBP10.71□□□□□ -0.69
PAF1YBR279W MRM1P25270 412 aa10.59□□□□□ -0.71
PAF1YBR279W TIF4632P39936 914 aaKnown RBP10.57□□□□□ -0.72
PAF1YBR279W RTG3P38165 486 aa10.51□□□□□ -0.73
PAF1YBR279W TGL3P40308 642 aa10.43□□□□□ -0.74
PAF1YBR279W RAM2P29703 316 aa10.35□□□□□ -0.75
PAF1YBR279W RCR1P38212 213 aa10.34□□□□□ -0.75
PAF1YBR279W YMR1P47147 688 aaKnown RBP RIP-Chip data10.31□□□□□ -0.76not detected
PAF1YBR279W NSR1P27476 414 aaKnown RBP RIP-Chip data10.3□□□□□ -0.76not detected
PAF1YBR279W MAK11P20484 414 aaKnown RBP10.29□□□□□ -0.76
PAF1YBR279W VPS29P38759 282 aa10.29□□□□□ -0.76
PAF1YBR279W YAP5P40574 245 aa10.28□□□□□ -0.76
PAF1YBR279W YOR238WQ08634 303 aa10.24□□□□□ -0.77
PAF1YBR279W SET1P38827 1080 aaKnown RBP10.22□□□□□ -0.77
PAF1YBR279W DBP1P24784 617 aaKnown RBP10.2□□□□□ -0.78
PAF1YBR279W SAS10Q12136 610 aaPredicted RBP10.2□□□□□ -0.78
PAF1YBR279W IFH1P39520 1085 aa10.18□□□□□ -0.78
PAF1YBR279W STS1P38637 319 aa10.14□□□□□ -0.79
PAF1YBR279W YFR006WP43590 535 aa10.13□□□□□ -0.79
PAF1YBR279W COQ8P27697 501 aa10.11□□□□□ -0.79
PAF1YBR279W MIF2P35201 549 aa10.11□□□□□ -0.79
PAF1YBR279W NOP53Q12080 455 aaKnown RBP10.11□□□□□ -0.79
PAF1YBR279W PIB1Q06651 286 aa10.07□□□□□ -0.8
PAF1YBR279W MST1P07236 462 aa10.07□□□□□ -0.8
PAF1YBR279W GTT3P39996 337 aa10.06□□□□□ -0.8
PAF1YBR279W CKB1P43639 278 aa10.03□□□□□ -0.8
PAF1YBR279W YPR148CQ06523 435 aa10.03□□□□□ -0.8
PAF1YBR279W VPS70P47161 811 aa10.01□□□□□ -0.81
PAF1YBR279W VMA1P17255 1071 aaKnown RBP10□□□□□ -0.81
PAF1YBR279W EDS1P38073 919 aa9.97□□□□□ -0.81
PAF1YBR279W PTC3P34221 468 aaKnown RBP9.96□□□□□ -0.82
PAF1YBR279W SPB4P25808 606 aaPredicted RBP9.9□□□□□ -0.82
PAF1YBR279W ATH1P48016 1211 aa9.9□□□□□ -0.82
PAF1YBR279W SAM3Q08986 587 aa9.9□□□□□ -0.82
PAF1YBR279W GRE2Q12068 342 aaKnown RBP9.9□□□□□ -0.82
PAF1YBR279W LEU3P08638 886 aa9.89□□□□□ -0.83
PAF1YBR279W ABP1P15891 592 aaKnown RBP9.86□□□□□ -0.83
PAF1YBR279W GYP5Q12344 894 aa9.86□□□□□ -0.83
PAF1YBR279W GUT1P32190 709 aa9.85□□□□□ -0.83
PAF1YBR279W UBP9P39967 754 aa9.85□□□□□ -0.83
PAF1YBR279W MSB4Q12317 492 aa9.82□□□□□ -0.84
PAF1YBR279W LEO1P38439 464 aa9.82□□□□□ -0.84
PAF1YBR279W REF2P42073 533 aaPredicted RBP9.82□□□□□ -0.84
PAF1YBR279W YOL036WQ08206 761 aa9.81□□□□□ -0.84
PAF1YBR279W WSC3Q12215 556 aa9.8□□□□□ -0.84
PAF1YBR279W PBS2P08018 668 aa9.79□□□□□ -0.84
PAF1YBR279W SET4P42948 560 aa9.79□□□□□ -0.84
PAF1YBR279W EAP1P36041 632 aaKnown RBP9.77□□□□□ -0.85
PAF1YBR279W HTA1P04911 132 aaKnown RBP9.75□□□□□ -0.85
PAF1YBR279W HTA2P04912 132 aa9.75□□□□□ -0.85
PAF1YBR279W MAK21Q12176 1025 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms