RNA–Protein interactions for RNA: YDR255C

RMD5, Transcript of Component of GID Complex that confers ubiquitin ligase (U3) activity, yeastyeast

Gene RMD5, Length 1,266 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RMD5YDR255C MTC1P47018 478 aaKnown RBP17.73■□□□□ 0.43
RMD5YDR255C DRS1P32892 752 aaKnown RBP16.95■□□□□ 0.3
RMD5YDR255C FAP1P53971 965 aa15.71■□□□□ 0.11
RMD5YDR255C PRI1P10363 409 aa14.77□□□□□ -0.05
RMD5YDR255C DIP2Q12220 943 aaPredicted RBP14.74□□□□□ -0.05
RMD5YDR255C PRY3P47033 881 aa14.73□□□□□ -0.05
RMD5YDR255C AAD16Q02895 342 aa14.66□□□□□ -0.06
RMD5YDR255C ISW2Q08773 1120 aa14.65□□□□□ -0.06
RMD5YDR255C RPG1P38249 964 aaKnown RBP14.53□□□□□ -0.08
RMD5YDR255C BFR2Q06631 534 aaKnown RBP14.26□□□□□ -0.13
RMD5YDR255C AVT3P36062 692 aa14.24□□□□□ -0.13
RMD5YDR255C RSE1Q04693 1361 aaKnown RBP14.13□□□□□ -0.15
RMD5YDR255C TSR3Q12094 313 aaKnown RBP14.05□□□□□ -0.16
RMD5YDR255C YCK3P39962 524 aa13.84□□□□□ -0.19
RMD5YDR255C HAA1Q12753 694 aaKnown RBP13.77□□□□□ -0.21
RMD5YDR255C RPL17AP05740 184 aaKnown RBP13.7□□□□□ -0.22
RMD5YDR255C RPL17BP46990 184 aaKnown RBP13.7□□□□□ -0.22
RMD5YDR255C REB1P21538 810 aa13.62□□□□□ -0.23
RMD5YDR255C MRPL32P25348 183 aa13.48□□□□□ -0.25
RMD5YDR255C TFA1P36100 482 aa13.25□□□□□ -0.29
RMD5YDR255C SPT21P35209 758 aa13.04□□□□□ -0.32
RMD5YDR255C YKR023WP36119 530 aaKnown RBP12.87□□□□□ -0.35
RMD5YDR255C CDC27P38042 758 aa12.84□□□□□ -0.35
RMD5YDR255C YGL015CP33199 130 aa12.81□□□□□ -0.36
RMD5YDR255C RIM101P33400 625 aa12.69□□□□□ -0.38
RMD5YDR255C HOP09932 586 aa12.67□□□□□ -0.38
RMD5YDR255C DCD1P06773 312 aa12.62□□□□□ -0.39
RMD5YDR255C TFC8Q12308 588 aa12.6□□□□□ -0.39
RMD5YDR255C MAP2P38174 421 aaKnown RBP12.41□□□□□ -0.42
RMD5YDR255C UBP10P53874 792 aaPredicted RBP12.36□□□□□ -0.43
RMD5YDR255C OXP1P28273 1286 aa12.3□□□□□ -0.44
RMD5YDR255C SCY1P53009 804 aa12.24□□□□□ -0.45
RMD5YDR255C BCH2P36122 765 aa12.23□□□□□ -0.45
RMD5YDR255C YIL055CP40523 627 aaKnown RBP12.17□□□□□ -0.46
RMD5YDR255C PTP3P40048 928 aa12.14□□□□□ -0.47
RMD5YDR255C YAH1Q12184 172 aaKnown RBP12.06□□□□□ -0.48
RMD5YDR255C SLX5P32828 619 aaKnown RBP12.04□□□□□ -0.48
RMD5YDR255C EPS1P40557 701 aa11.94□□□□□ -0.5
RMD5YDR255C RSM7P47150 247 aa11.94□□□□□ -0.5
RMD5YDR255C TIF4632P39936 914 aaKnown RBP11.9□□□□□ -0.5
RMD5YDR255C BDF1P35817 686 aa11.89□□□□□ -0.51
RMD5YDR255C TGL3P40308 642 aa11.83□□□□□ -0.52
RMD5YDR255C AI2P03876 854 aa11.82□□□□□ -0.52
RMD5YDR255C YLR271WQ06152 274 aa11.8□□□□□ -0.52
RMD5YDR255C BBC1P47068 1157 aa11.79□□□□□ -0.52
RMD5YDR255C SSP1P38871 571 aa11.73□□□□□ -0.53
RMD5YDR255C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.62□□□□□ -0.55not detected
RMD5YDR255C BUD31P25337 157 aaPredicted RBP11.55□□□□□ -0.56
RMD5YDR255C PSD2P53037 1138 aaKnown RBP11.54□□□□□ -0.56
RMD5YDR255C MRM1P25270 412 aa11.43□□□□□ -0.58
RMD5YDR255C CST9Q06032 482 aa11.41□□□□□ -0.58
RMD5YDR255C MGA2P40578 1113 aa11.4□□□□□ -0.58
RMD5YDR255C UBP9P39967 754 aa11.39□□□□□ -0.59
RMD5YDR255C YOR238WQ08634 303 aa11.38□□□□□ -0.59
RMD5YDR255C YAP5P40574 245 aa11.34□□□□□ -0.59
RMD5YDR255C MST1P07236 462 aa11.33□□□□□ -0.6
RMD5YDR255C NSR1P27476 414 aaKnown RBP RIP-Chip data11.31□□□□□ -0.6not detected
RMD5YDR255C RQC2Q12532 1038 aaKnown RBP11.24□□□□□ -0.61
RMD5YDR255C PIB1Q06651 286 aa11.21□□□□□ -0.61
RMD5YDR255C RTG3P38165 486 aa11.18□□□□□ -0.62
RMD5YDR255C YBL029C-AQ3E756 94 aa11.18□□□□□ -0.62
RMD5YDR255C VPS29P38759 282 aa11.12□□□□□ -0.63
RMD5YDR255C WSC3Q12215 556 aa11.12□□□□□ -0.63
RMD5YDR255C RCR1P38212 213 aa11.11□□□□□ -0.63
RMD5YDR255C GTT3P39996 337 aa11.11□□□□□ -0.63
RMD5YDR255C SIS1P25294 352 aaKnown RBP11.1□□□□□ -0.63
RMD5YDR255C YMR1P47147 688 aaKnown RBP RIP-Chip data11.08□□□□□ -0.64not detected
RMD5YDR255C YFR006WP43590 535 aa11.07□□□□□ -0.64
RMD5YDR255C DBP1P24784 617 aaKnown RBP11.06□□□□□ -0.64
RMD5YDR255C VNX1P42839 908 aa11.06□□□□□ -0.64
RMD5YDR255C STS1P38637 319 aa10.99□□□□□ -0.65
RMD5YDR255C SPP1Q03012 353 aa10.99□□□□□ -0.65
RMD5YDR255C TIF11P38912 153 aaKnown RBP10.88□□□□□ -0.67
RMD5YDR255C VMA1P17255 1071 aaKnown RBP10.87□□□□□ -0.67
RMD5YDR255C RAM2P29703 316 aa10.84□□□□□ -0.67
RMD5YDR255C SET4P42948 560 aa10.84□□□□□ -0.67
RMD5YDR255C DMA1P38823 416 aa10.81□□□□□ -0.68
RMD5YDR255C ULI1P43604 169 aa10.81□□□□□ -0.68
RMD5YDR255C YOL036WQ08206 761 aa10.81□□□□□ -0.68
RMD5YDR255C MSB4Q12317 492 aa10.77□□□□□ -0.69
RMD5YDR255C SAM3Q08986 587 aa10.75□□□□□ -0.69
RMD5YDR255C MAK11P20484 414 aaKnown RBP10.74□□□□□ -0.69
RMD5YDR255C MIF2P35201 549 aa10.73□□□□□ -0.69
RMD5YDR255C IOC2Q12072 812 aa10.73□□□□□ -0.69
RMD5YDR255C LDB19Q12502 818 aa10.73□□□□□ -0.69
RMD5YDR255C EAP1P36041 632 aaKnown RBP10.72□□□□□ -0.69
RMD5YDR255C TRP5P00931 707 aaKnown RBP10.69□□□□□ -0.7
RMD5YDR255C GYP5Q12344 894 aa10.69□□□□□ -0.7
RMD5YDR255C DCW1P36091 449 aa10.63□□□□□ -0.71
RMD5YDR255C AIR2Q12476 344 aaKnown RBP10.63□□□□□ -0.71
RMD5YDR255C COQ8P27697 501 aa10.62□□□□□ -0.71
RMD5YDR255C EDS1P38073 919 aa10.62□□□□□ -0.71
RMD5YDR255C FKH1P40466 484 aa10.62□□□□□ -0.71
RMD5YDR255C RTG1P32607 177 aa10.59□□□□□ -0.71
RMD5YDR255C PTC3P34221 468 aaKnown RBP10.57□□□□□ -0.72
RMD5YDR255C YJL171CP46992 396 aa10.57□□□□□ -0.72
RMD5YDR255C GRE2Q12068 342 aaKnown RBP10.57□□□□□ -0.72
RMD5YDR255C HTA1P04911 132 aaKnown RBP10.56□□□□□ -0.72
RMD5YDR255C HTA2P04912 132 aa10.56□□□□□ -0.72
RMD5YDR255C ABP1P15891 592 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms