Protein–RNA interactions for Protein: Q03691

ROT1, Protein ROT1, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ROT1Q03691 YDR250CYDR250C 276 nt3.4□□□□□ -1.87
ROT1Q03691 RFC3YNL290W 1023 nt3.4□□□□□ -1.87
ROT1Q03691 VHS3YOR054C 2025 nt3.4□□□□□ -1.87
ROT1Q03691 ISU1YPL135W 498 nt3.4□□□□□ -1.87
ROT1Q03691 PRK1YIL095W 2433 nt3.4□□□□□ -1.87
ROT1Q03691 FAA1YOR317W 2103 nt3.4□□□□□ -1.87
ROT1Q03691 YHR078WYHR078W 1659 nt3.39□□□□□ -1.87
ROT1Q03691 CCT7YJL111W 1653 nt3.39□□□□□ -1.87
ROT1Q03691 HCS1YKL017C 2052 nt3.39□□□□□ -1.87
ROT1Q03691 RPL35AYDL191W 363 nt3.39□□□□□ -1.87
ROT1Q03691 tT(UGU)Q1tT(UGU)Q1 76 nt3.39□□□□□ -1.87
ROT1Q03691 RPL23AYBL087C 414 nt3.39□□□□□ -1.87
ROT1Q03691 YNL338WYNL338W 159 nt3.39□□□□□ -1.87
ROT1Q03691 IES4YOR189W 351 nt3.39□□□□□ -1.87
ROT1Q03691 COX1Q0045 1605 nt3.39□□□□□ -1.87
ROT1Q03691 SRO7YPR032W 3102 nt3.39□□□□□ -1.87
ROT1Q03691 TCO89YPL180W 2400 nt3.38□□□□□ -1.87
ROT1Q03691 YDR089WYDR089W 2610 nt3.38□□□□□ -1.87
ROT1Q03691 YDL011CYDL011C 324 nt3.38□□□□□ -1.87
ROT1Q03691 GPI14YJR013W 1212 nt3.38□□□□□ -1.87
ROT1Q03691 SRL3YKR091W 741 nt3.38□□□□□ -1.87
ROT1Q03691 YNL205CYNL205C 423 nt3.38□□□□□ -1.87
ROT1Q03691 YOR008C-AYOR008C-A 225 nt3.38□□□□□ -1.87
ROT1Q03691 YOR050CYOR050C 348 nt3.38□□□□□ -1.87
ROT1Q03691 RED1YLR263W 2484 nt3.38□□□□□ -1.87
ROT1Q03691 RAD2YGR258C 3096 nt3.38□□□□□ -1.87
ROT1Q03691 CWC22YGR278W 1734 nt3.38□□□□□ -1.87
ROT1Q03691 FUN12YAL035W 3009 nt3.37□□□□□ -1.87
ROT1Q03691 DAD4YDR320C-A 219 nt3.37□□□□□ -1.87
ROT1Q03691 TSA2YDR453C 591 nt3.37□□□□□ -1.87
ROT1Q03691 MZM1YDR493W 372 nt3.37□□□□□ -1.87
ROT1Q03691 RPL22AYLR061W 366 nt3.37□□□□□ -1.87
ROT1Q03691 YBR137WYBR137W 540 nt3.37□□□□□ -1.87
ROT1Q03691 SGO1YOR073W 1773 nt3.36□□□□□ -1.87
ROT1Q03691 RPL14BYHL001W 417 nt3.36□□□□□ -1.87
ROT1Q03691 MGR1YCL044C 1254 nt3.36□□□□□ -1.87
ROT1Q03691 ZDS1YMR273C 2748 nt3.36□□□□□ -1.87
ROT1Q03691 YKL050CYKL050C 2769 nt3.36□□□□□ -1.87
ROT1Q03691 YLL032CYLL032C 2478 nt3.35□□□□□ -1.87
ROT1Q03691 FAA2YER015W 2235 nt3.35□□□□□ -1.87
ROT1Q03691 VID27YNL212W 2349 nt3.35□□□□□ -1.87
ROT1Q03691 YDL062WYDL062W 426 nt3.35□□□□□ -1.87
ROT1Q03691 SMT3YDR510W 306 nt3.35□□□□□ -1.87
ROT1Q03691 TIM8YJR135W-A 264 nt3.35□□□□□ -1.87
ROT1Q03691 YMR230W-AYMR230W-A 189 nt3.35□□□□□ -1.87
ROT1Q03691 URB2YJR041C 3525 nt3.35□□□□□ -1.87
ROT1Q03691 SHQ1YIL104C 1524 nt3.34□□□□□ -1.87
ROT1Q03691 NAN1YPL126W 2691 nt3.34□□□□□ -1.87
ROT1Q03691 YGL074CYGL074C 327 nt3.34□□□□□ -1.87
ROT1Q03691 TMA22YJR014W 597 nt3.34□□□□□ -1.87
ROT1Q03691 YOR072W-AYOR072W-A 249 nt3.34□□□□□ -1.87
ROT1Q03691 SNF2YOR290C 5112 nt3.34□□□□□ -1.87
ROT1Q03691 RNR1YER070W 2667 nt3.34□□□□□ -1.88
ROT1Q03691 RSF2YJR127C 4143 nt3.34□□□□□ -1.88
ROT1Q03691 MUS81YDR386W 1899 nt3.33□□□□□ -1.88
ROT1Q03691 GRS2YPR081C 1857 nt3.33□□□□□ -1.88
ROT1Q03691 RAD61YDR014W 1944 nt3.33□□□□□ -1.88
ROT1Q03691 RSC1YGR056W 2787 nt3.33□□□□□ -1.88
ROT1Q03691 VPS41YDR080W 2979 nt3.33□□□□□ -1.88
ROT1Q03691 GLC3YEL011W 2115 nt3.33□□□□□ -1.88
ROT1Q03691 HPA3YEL066W 540 nt3.33□□□□□ -1.88
ROT1Q03691 YGR174W-AYGR174W-A 87 nt3.33□□□□□ -1.88
ROT1Q03691 YOL019W-AYOL019W-A 153 nt3.33□□□□□ -1.88
ROT1Q03691 YBR141W-AYBR141W-A 96 nt3.33□□□□□ -1.88
ROT1Q03691 SPT23YKL020C 3249 nt3.33□□□□□ -1.88
ROT1Q03691 NUP133YKR082W 3474 nt3.33□□□□□ -1.88
ROT1Q03691 KHA1YJL094C 2622 nt3.33□□□□□ -1.88
ROT1Q03691 TRS65YGR166W 1683 nt3.33□□□□□ -1.88
ROT1Q03691 YJL016WYJL016W 1686 nt3.33□□□□□ -1.88
ROT1Q03691 SSM4YIL030C 3960 nt3.33□□□□□ -1.88
ROT1Q03691 RAD1YPL022W 3303 nt3.32□□□□□ -1.88
ROT1Q03691 LCB5YLR260W 2064 nt3.32□□□□□ -1.88
ROT1Q03691 BCK2YER167W 2556 nt3.32□□□□□ -1.88
ROT1Q03691 POG1YIL122W 1056 nt3.32□□□□□ -1.88
ROT1Q03691 HHF1YBR009C 312 nt3.32□□□□□ -1.88
ROT1Q03691 YBR064WYBR064W 429 nt3.32□□□□□ -1.88
ROT1Q03691 ECM22YLR228C 2445 nt3.32□□□□□ -1.88
ROT1Q03691 TPS2YDR074W 2691 nt3.32□□□□□ -1.88
ROT1Q03691 TAF7YMR227C 1773 nt3.31□□□□□ -1.88
ROT1Q03691 CSN9YDR179C 489 nt3.31□□□□□ -1.88
ROT1Q03691 FRQ1YDR373W 573 nt3.31□□□□□ -1.88
ROT1Q03691 AIM11YER093C-A 414 nt3.31□□□□□ -1.88
ROT1Q03691 RPL40AYIL148W 387 nt3.31□□□□□ -1.88
ROT1Q03691 MF(ALPHA)1YPL187W 498 nt3.31□□□□□ -1.88
ROT1Q03691 21S_rRNA21S_rRNA 3296 nt3.31□□□□□ -1.88
ROT1Q03691 ULS1YOR191W 4860 nt3.31□□□□□ -1.88
ROT1Q03691 SNT1YCR033W 3681 nt3.3□□□□□ -1.88
ROT1Q03691 YDL185C-AYDL185C-A 228 nt3.3□□□□□ -1.88
ROT1Q03691 snR85snR85 171 nt3.3□□□□□ -1.88
ROT1Q03691 PHS1YJL097W 654 nt3.3□□□□□ -1.88
ROT1Q03691 HSK3YKL138C-A 210 nt3.3□□□□□ -1.88
ROT1Q03691 HTB2YBL002W 396 nt3.3□□□□□ -1.88
ROT1Q03691 YLR342W-AYLR342W-A 174 nt3.3□□□□□ -1.88
ROT1Q03691 HEM4YOR278W 828 nt3.3□□□□□ -1.88
ROT1Q03691 RPL36BYPL249C-A 303 nt3.3□□□□□ -1.88
ROT1Q03691 PDC2YDR081C 2778 nt3.3□□□□□ -1.88
ROT1Q03691 SSY1YDR160W 2559 nt3.3□□□□□ -1.88
ROT1Q03691 SEA4YBL104C 3117 nt3.3□□□□□ -1.88
ROT1Q03691 REV1YOR346W 2958 nt3.3□□□□□ -1.88
ROT1Q03691 SDH6YDR379C-A 240 nt3.29□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 17.9 ms