Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 RPS22AYJL190C 393 nt2.91□□□□□ -1.94
RPN11P43588 CYR1YJL005W 6081 nt2.91□□□□□ -1.94
RPN11P43588 ATP22YDR350C 2055 nt2.91□□□□□ -1.94
RPN11P43588 GDS1YOR355W 1569 nt2.91□□□□□ -1.94
RPN11P43588 SDC25YLL016W 3147 nt2.9□□□□□ -1.94
RPN11P43588 snR56snR56 88 nt2.9□□□□□ -1.95
RPN11P43588 USE1YGL098W 738 nt2.9□□□□□ -1.95
RPN11P43588 RPL14BYHL001W 417 nt2.9□□□□□ -1.95
RPN11P43588 YAP3YHL009C 993 nt2.9□□□□□ -1.95
RPN11P43588 CTK3YML112W 891 nt2.9□□□□□ -1.95
RPN11P43588 YNL179CYNL179C 438 nt2.9□□□□□ -1.95
RPN11P43588 YNR021WYNR021W 1215 nt2.9□□□□□ -1.95
RPN11P43588 YOL150CYOL150C 312 nt2.9□□□□□ -1.95
RPN11P43588 NET1YJL076W 3570 nt2.9□□□□□ -1.95
RPN11P43588 KSP1YHR082C 3090 nt2.9□□□□□ -1.95
RPN11P43588 PSY2YNL201C 2577 nt2.9□□□□□ -1.95
RPN11P43588 UBP14YBR058C 2346 nt2.9□□□□□ -1.95
RPN11P43588 NUP100YKL068W 2880 nt2.89□□□□□ -1.95
RPN11P43588 DAD4YDR320C-A 219 nt2.89□□□□□ -1.95
RPN11P43588 RPI1YIL119C 1224 nt2.89□□□□□ -1.95
RPN11P43588 YLR171WYLR171W 390 nt2.89□□□□□ -1.95
RPN11P43588 YLR230WYLR230W 306 nt2.89□□□□□ -1.95
RPN11P43588 HHT2YNL031C 411 nt2.89□□□□□ -1.95
RPN11P43588 YNL043CYNL043C 321 nt2.89□□□□□ -1.95
RPN11P43588 OST2YOR103C 393 nt2.89□□□□□ -1.95
RPN11P43588 CDH1YGL003C 1701 nt2.88□□□□□ -1.95
RPN11P43588 BI2Q0110 1272 nt2.88□□□□□ -1.95
RPN11P43588 RPS26BYER131W 360 nt2.88□□□□□ -1.95
RPN11P43588 YHR130CYHR130C 336 nt2.88□□□□□ -1.95
RPN11P43588 YKL068W-AYKL068W-A 237 nt2.88□□□□□ -1.95
RPN11P43588 AIM29YKR074W 468 nt2.88□□□□□ -1.95
RPN11P43588 LSM2YBL026W 288 nt2.88□□□□□ -1.95
RPN11P43588 YMR141CYMR141C 309 nt2.88□□□□□ -1.95
RPN11P43588 AIM36YMR157C 768 nt2.88□□□□□ -1.95
RPN11P43588 RIO2YNL207W 1278 nt2.88□□□□□ -1.95
RPN11P43588 SWR1YDR334W 4545 nt2.88□□□□□ -1.95
RPN11P43588 URB2YJR041C 3525 nt2.88□□□□□ -1.95
RPN11P43588 MES1YGR264C 2256 nt2.88□□□□□ -1.95
RPN11P43588 PEX8YGR077C 1770 nt2.87□□□□□ -1.95
RPN11P43588 TRZ1YKR079C 2517 nt2.87□□□□□ -1.95
RPN11P43588 BFR1YOR198C 1413 nt2.87□□□□□ -1.95
RPN11P43588 HFM1YGL251C 3564 nt2.87□□□□□ -1.95
RPN11P43588 YER039C-AYER039C-A 219 nt2.87□□□□□ -1.95
RPN11P43588 ARV1YLR242C 966 nt2.87□□□□□ -1.95
RPN11P43588 YMR052C-AYMR052C-A 366 nt2.87□□□□□ -1.95
RPN11P43588 IRC16YPR038W 360 nt2.87□□□□□ -1.95
RPN11P43588 AI2Q0055 2565 nt2.87□□□□□ -1.95
RPN11P43588 YER038W-AYER038W-A 381 nt2.86□□□□□ -1.95
RPN11P43588 MRP49YKL167C 414 nt2.86□□□□□ -1.95
RPN11P43588 RPS22BYLR367W 393 nt2.86□□□□□ -1.95
RPN11P43588 YNL324WYNL324W 396 nt2.86□□□□□ -1.95
RPN11P43588 SWM2YNR004W 441 nt2.86□□□□□ -1.95
RPN11P43588 TFC1YBR123C 1950 nt2.86□□□□□ -1.95
RPN11P43588 BOI1YBL085W 2943 nt2.86□□□□□ -1.95
RPN11P43588 RIX1YHR197W 2292 nt2.86□□□□□ -1.95
RPN11P43588 MUD2YKL074C 1584 nt2.86□□□□□ -1.95
RPN11P43588 GCV2YMR189W 3105 nt2.86□□□□□ -1.95
RPN11P43588 SEC7YDR170C 6030 nt2.85□□□□□ -1.95
RPN11P43588 TFB1YDR311W 1929 nt2.85□□□□□ -1.95
RPN11P43588 EXO84YBR102C 2262 nt2.85□□□□□ -1.95
RPN11P43588 ECM29YHL030W 5607 nt2.85□□□□□ -1.95
RPN11P43588 BTT1YDR252W 450 nt2.85□□□□□ -1.95
RPN11P43588 PKR1YMR123W 369 nt2.85□□□□□ -1.95
RPN11P43588 PRM3YPL192C 402 nt2.85□□□□□ -1.95
RPN11P43588 SAP190YKR028W 3102 nt2.85□□□□□ -1.95
RPN11P43588 YJR098CYJR098C 1971 nt2.85□□□□□ -1.95
RPN11P43588 YER119C-AYER119C-A 372 nt2.84□□□□□ -1.95
RPN11P43588 YMR153C-AYMR153C-A 336 nt2.84□□□□□ -1.95
RPN11P43588 TIF11YMR260C 462 nt2.84□□□□□ -1.95
RPN11P43588 NOP15YNL110C 663 nt2.84□□□□□ -1.95
RPN11P43588 SNF12YNR023W 1701 nt2.84□□□□□ -1.96
RPN11P43588 YCR064CYCR064C 411 nt2.83□□□□□ -1.96
RPN11P43588 RTR2YDR066C 591 nt2.83□□□□□ -1.96
RPN11P43588 YDR114CYDR114C 303 nt2.83□□□□□ -1.96
RPN11P43588 Q0142Q0142 177 nt2.83□□□□□ -1.96
RPN11P43588 RNR4YGR180C 1038 nt2.83□□□□□ -1.96
RPN11P43588 VPH2YKL119C 648 nt2.83□□□□□ -1.96
RPN11P43588 SAS2YMR127C 1017 nt2.83□□□□□ -1.96
RPN11P43588 KEL2YGR238C 2649 nt2.83□□□□□ -1.96
RPN11P43588 HSH155YMR288W 2916 nt2.82□□□□□ -1.96
RPN11P43588 PDS5YMR076C 3834 nt2.82□□□□□ -1.96
RPN11P43588 TOM70YNL121C 1854 nt2.82□□□□□ -1.96
RPN11P43588 ECL1YGR146C 636 nt2.82□□□□□ -1.96
RPN11P43588 YIL030W-AYIL030W-A 339 nt2.82□□□□□ -1.96
RPN11P43588 YHC1YLR298C 696 nt2.82□□□□□ -1.96
RPN11P43588 FYV12YOR183W 390 nt2.82□□□□□ -1.96
RPN11P43588 DUF1YOL087C 3351 nt2.81□□□□□ -1.96
RPN11P43588 FAR1YJL157C 2493 nt2.81□□□□□ -1.96
RPN11P43588 RAD6YGL058W 519 nt2.81□□□□□ -1.96
RPN11P43588 snR191snR191 274 nt2.81□□□□□ -1.96
RPN11P43588 YKL100CYKL100C 1764 nt2.81□□□□□ -1.96
RPN11P43588 YKR078WYKR078W 1758 nt2.81□□□□□ -1.96
RPN11P43588 RPN1YHR027C 2982 nt2.8□□□□□ -1.96
RPN11P43588 SSE1YPL106C 2082 nt2.8□□□□□ -1.96
RPN11P43588 TIF35YDR429C 825 nt2.8□□□□□ -1.96
RPN11P43588 GCN4YEL009C 846 nt2.8□□□□□ -1.96
RPN11P43588 HUR1YGL168W 333 nt2.8□□□□□ -1.96
RPN11P43588 YHR175W-AYHR175W-A 150 nt2.8□□□□□ -1.96
RPN11P43588 BAT1YHR208W 1182 nt2.8□□□□□ -1.96
RPN11P43588 YLR269CYLR269C 351 nt2.8□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 57 ms