RNA–Protein interactions for RNA: YHL030W

ECM29, Transcript of Scaffold protein, yeastyeast

Gene ECM29, Length 5,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM29YHL030W DRS1P32892 752 aaKnown RBP4.02□□□□□ -1.77
ECM29YHL030W SAS10Q12136 610 aaPredicted RBP3.84□□□□□ -1.79
ECM29YHL030W SGS1P35187 1447 aa3.84□□□□□ -1.8
ECM29YHL030W TAF7Q05021 590 aa3.83□□□□□ -1.8
ECM29YHL030W RQC2Q12532 1038 aaKnown RBP3.76□□□□□ -1.81
ECM29YHL030W NOP2P40991 618 aaKnown RBP3.76□□□□□ -1.81
ECM29YHL030W TFA1P36100 482 aa3.76□□□□□ -1.81
ECM29YHL030W MNN4P36044 1178 aa3.75□□□□□ -1.81
ECM29YHL030W SPA2P23201 1466 aaKnown RBP3.71□□□□□ -1.82
ECM29YHL030W IFH1P39520 1085 aa3.7□□□□□ -1.82
ECM29YHL030W POL5P39985 1022 aaKnown RBP3.7□□□□□ -1.82
ECM29YHL030W FPR3P38911 411 aaKnown RBP3.65□□□□□ -1.82
ECM29YHL030W SCT1P32784 759 aa3.65□□□□□ -1.82
ECM29YHL030W LEU3P08638 886 aa3.64□□□□□ -1.83
ECM29YHL030W MTC1P47018 478 aaKnown RBP3.64□□□□□ -1.83
ECM29YHL030W SSN2P38931 1420 aa3.64□□□□□ -1.83
ECM29YHL030W NOP7P53261 605 aaKnown RBP3.64□□□□□ -1.83
ECM29YHL030W PAF1P38351 445 aa3.64□□□□□ -1.83
ECM29YHL030W RTT106P40161 455 aa3.62□□□□□ -1.83
ECM29YHL030W INO80P53115 1489 aa3.61□□□□□ -1.83
ECM29YHL030W CAB3P36076 571 aa3.6□□□□□ -1.83
ECM29YHL030W EAF7P53911 425 aaKnown RBP3.6□□□□□ -1.83
ECM29YHL030W ENP1P38333 483 aaKnown RBP3.6□□□□□ -1.83
ECM29YHL030W ORC1P54784 914 aaPredicted RBP3.59□□□□□ -1.83
ECM29YHL030W TAF2P23255 1407 aa3.59□□□□□ -1.83
ECM29YHL030W SEC3P33332 1336 aaKnown RBP3.56□□□□□ -1.84
ECM29YHL030W AIM44Q99299 758 aa3.55□□□□□ -1.84
ECM29YHL030W BFR2Q06631 534 aaKnown RBP3.54□□□□□ -1.84
ECM29YHL030W NAP1P25293 417 aaKnown RBP3.53□□□□□ -1.84
ECM29YHL030W CKB1P43639 278 aa3.53□□□□□ -1.84
ECM29YHL030W SKI3P17883 1432 aaKnown RBP3.51□□□□□ -1.85
ECM29YHL030W YTA7P40340 1379 aa3.51□□□□□ -1.85
ECM29YHL030W TCB3Q03640 1545 aaKnown RBP3.51□□□□□ -1.85
ECM29YHL030W RSE1Q04693 1361 aaKnown RBP3.5□□□□□ -1.85
ECM29YHL030W BUD21Q08492 214 aaPredicted RBP3.5□□□□□ -1.85
ECM29YHL030W NSR1P27476 414 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
ECM29YHL030W STH1P32597 1359 aa3.48□□□□□ -1.85
ECM29YHL030W SMC4Q12267 1418 aa3.48□□□□□ -1.85
ECM29YHL030W YFR016CP43597 1233 aaKnown RBP3.47□□□□□ -1.85
ECM29YHL030W BUD4P47136 1447 aa3.47□□□□□ -1.85
ECM29YHL030W PAN1P32521 1480 aa3.47□□□□□ -1.85
ECM29YHL030W SPT7P35177 1332 aa3.45□□□□□ -1.86
ECM29YHL030W IKI3Q06706 1349 aaKnown RBP3.45□□□□□ -1.86
ECM29YHL030W QCR6P00127 147 aa3.45□□□□□ -1.86
ECM29YHL030W LEO1P38439 464 aa3.45□□□□□ -1.86
ECM29YHL030W COG8Q04632 607 aa3.44□□□□□ -1.86
ECM29YHL030W SPT6P23615 1451 aaKnown RBP3.43□□□□□ -1.86
ECM29YHL030W XRN1P22147 1528 aaKnown RBP3.43□□□□□ -1.86
ECM29YHL030W RPC31P17890 251 aa3.43□□□□□ -1.86
ECM29YHL030W YRB30P53107 440 aaPredicted RBP3.43□□□□□ -1.86
ECM29YHL030W PAP2P53632 584 aaKnown RBP3.42□□□□□ -1.86
ECM29YHL030W SIS2P36024 562 aa3.41□□□□□ -1.86
ECM29YHL030W RNA1P11745 407 aaKnown RBP3.41□□□□□ -1.86
ECM29YHL030W PDS5Q04264 1277 aa3.41□□□□□ -1.86
ECM29YHL030W RAD2P07276 1031 aa3.41□□□□□ -1.86
ECM29YHL030W ESC2Q06340 456 aa3.4□□□□□ -1.86
ECM29YHL030W KRI1P42846 591 aaKnown RBP3.4□□□□□ -1.86
ECM29YHL030W EBP2P36049 427 aaKnown RBP3.4□□□□□ -1.87
ECM29YHL030W TAF5P38129 798 aa3.4□□□□□ -1.87
ECM29YHL030W CLC1P17891 233 aa3.4□□□□□ -1.87
ECM29YHL030W FUN12P39730 1002 aaKnown RBP3.38□□□□□ -1.87
ECM29YHL030W PSD2P53037 1138 aaKnown RBP3.38□□□□□ -1.87
ECM29YHL030W CDC45Q08032 650 aa3.38□□□□□ -1.87
ECM29YHL030W NOP8Q08287 484 aaPredicted RBP3.38□□□□□ -1.87
ECM29YHL030W MMS22Q06164 1454 aa3.38□□□□□ -1.87
ECM29YHL030W SPP41P38904 1435 aa3.38□□□□□ -1.87
ECM29YHL030W URN1Q06525 465 aaKnown RBP3.38□□□□□ -1.87
ECM29YHL030W ASF1P32447 279 aa3.37□□□□□ -1.87
ECM29YHL030W KIP3P53086 805 aaKnown RBP3.37□□□□□ -1.87
ECM29YHL030W ESL2P36168 1195 aa3.37□□□□□ -1.87
ECM29YHL030W MRX12P47084 519 aa3.37□□□□□ -1.87
ECM29YHL030W SWR1Q05471 1514 aa3.36□□□□□ -1.87
ECM29YHL030W KAR2P16474 682 aaKnown RBP3.35□□□□□ -1.87
ECM29YHL030W VPS27P40343 622 aaKnown RBP3.35□□□□□ -1.87
ECM29YHL030W MAK21Q12176 1025 aaKnown RBP3.35□□□□□ -1.87
ECM29YHL030W STU1P38198 1513 aa3.35□□□□□ -1.87
ECM29YHL030W RTF1P53064 558 aa3.34□□□□□ -1.87
ECM29YHL030W YDL144CQ07589 356 aa3.34□□□□□ -1.87
ECM29YHL030W YGL081WP53156 320 aa3.34□□□□□ -1.87
ECM29YHL030W MHP1P43638 1398 aa3.34□□□□□ -1.88
ECM29YHL030W RTR1P40084 226 aaPredicted RBP3.34□□□□□ -1.88
ECM29YHL030W VPS24P36095 224 aaKnown RBP3.33□□□□□ -1.88
ECM29YHL030W BUD27P43573 796 aaKnown RBP RIP-Chip data3.33□□□□□ -1.88not detected
ECM29YHL030W YPR148CQ06523 435 aa3.33□□□□□ -1.88
ECM29YHL030W ECM16Q04217 1267 aaKnown RBP3.32□□□□□ -1.88
ECM29YHL030W SSM4P40318 1319 aa3.32□□□□□ -1.88
ECM29YHL030W MET10P39692 1035 aa3.32□□□□□ -1.88
ECM29YHL030W ECM5Q03214 1411 aa3.32□□□□□ -1.88
ECM29YHL030W CHZ1P40019 153 aaPredicted RBP3.32□□□□□ -1.88
ECM29YHL030W NOP58Q12499 511 aaKnown RBP3.31□□□□□ -1.88
ECM29YHL030W JIP3O13555 125 aa3.31□□□□□ -1.88
ECM29YHL030W SPE2P21182 396 aa3.31□□□□□ -1.88
ECM29YHL030W MYO2P19524 1574 aaKnown RBP3.3□□□□□ -1.88
ECM29YHL030W RPP0P05317 312 aaKnown RBP3.3□□□□□ -1.88
ECM29YHL030W MIC60P36112 540 aa3.3□□□□□ -1.88
ECM29YHL030W DAL5P15365 543 aa3.3□□□□□ -1.88
ECM29YHL030W PRS1P32895 427 aaKnown RBP3.3□□□□□ -1.88
ECM29YHL030W HSL1P34244 1518 aa3.3□□□□□ -1.88
ECM29YHL030W TPM1P17536 199 aaKnown RBP3.29□□□□□ -1.88
ECM29YHL030W BDP1P46678 594 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms