Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 MOG1YJR074W 657 nt4.51□□□□□ -1.69
TY1A-PR2P0CX60 YML037CYML037C 1023 nt4.51□□□□□ -1.69
TY1A-PR2P0CX60 YML057C-AYML057C-A 390 nt4.51□□□□□ -1.69
TY1A-PR2P0CX60 RIM15YFL033C 5313 nt4.51□□□□□ -1.69
TY1A-PR2P0CX60 LCB5YLR260W 2064 nt4.5□□□□□ -1.69
TY1A-PR2P0CX60 SSE1YPL106C 2082 nt4.5□□□□□ -1.69
TY1A-PR2P0CX60 PRM15YMR278W 1869 nt4.5□□□□□ -1.69
TY1A-PR2P0CX60 TRM44YPL030W 1704 nt4.5□□□□□ -1.69
TY1A-PR2P0CX60 GDH2YDL215C 3279 nt4.5□□□□□ -1.69
TY1A-PR2P0CX60 SEC39YLR440C 2130 nt4.5□□□□□ -1.69
TY1A-PR2P0CX60 YNL285WYNL285W 372 nt4.5□□□□□ -1.69
TY1A-PR2P0CX60 YBR182C-AYBR182C-A 195 nt4.5□□□□□ -1.69
TY1A-PR2P0CX60 JJJ2YJL162C 1752 nt4.5□□□□□ -1.69
TY1A-PR2P0CX60 GYP7YDL234C 2241 nt4.49□□□□□ -1.69
TY1A-PR2P0CX60 GRC3YLL035W 1899 nt4.49□□□□□ -1.69
TY1A-PR2P0CX60 BLM10YFL007W 6432 nt4.49□□□□□ -1.69
TY1A-PR2P0CX60 APC4YDR118W 1959 nt4.49□□□□□ -1.69
TY1A-PR2P0CX60 PGM2YMR105C 1710 nt4.49□□□□□ -1.69
TY1A-PR2P0CX60 JHD2YJR119C 2187 nt4.48□□□□□ -1.69
TY1A-PR2P0CX60 YMR102CYMR102C 2505 nt4.48□□□□□ -1.69
TY1A-PR2P0CX60 SLP1YOR154W 1764 nt4.48□□□□□ -1.69
TY1A-PR2P0CX60 TRK2YKR050W 2670 nt4.48□□□□□ -1.69
TY1A-PR2P0CX60 NPC2YDL046W 522 nt4.48□□□□□ -1.69
TY1A-PR2P0CX60 YHR210CYHR210C 1026 nt4.48□□□□□ -1.69
TY1A-PR2P0CX60 YLR012CYLR012C 300 nt4.48□□□□□ -1.69
TY1A-PR2P0CX60 SAR1YPL218W 573 nt4.48□□□□□ -1.69
TY1A-PR2P0CX60 FRE8YLR047C 2061 nt4.48□□□□□ -1.69
TY1A-PR2P0CX60 FZO1YBR179C 2568 nt4.48□□□□□ -1.69
TY1A-PR2P0CX60 RRP9YPR137W 1722 nt4.47□□□□□ -1.69
TY1A-PR2P0CX60 RPS18BYML026C 441 nt4.47□□□□□ -1.69
TY1A-PR2P0CX60 YNL097C-BYNL097C-B 123 nt4.47□□□□□ -1.69
TY1A-PR2P0CX60 ADP1YCR011C 3150 nt4.47□□□□□ -1.69
TY1A-PR2P0CX60 SEC5YDR166C 2916 nt4.47□□□□□ -1.69
TY1A-PR2P0CX60 YIL166CYIL166C 1629 nt4.46□□□□□ -1.69
TY1A-PR2P0CX60 YSH1YLR277C 2340 nt4.46□□□□□ -1.69
TY1A-PR2P0CX60 KAP114YGL241W 3015 nt4.46□□□□□ -1.69
TY1A-PR2P0CX60 PDC2YDR081C 2778 nt4.46□□□□□ -1.7
TY1A-PR2P0CX60 MPS1YDL028C 2295 nt4.46□□□□□ -1.7
TY1A-PR2P0CX60 THI21YPL258C 1656 nt4.46□□□□□ -1.7
TY1A-PR2P0CX60 YBR184WYBR184W 1572 nt4.46□□□□□ -1.7
TY1A-PR2P0CX60 CIN4YMR138W 576 nt4.46□□□□□ -1.7
TY1A-PR2P0CX60 ATH1YPR026W 3636 nt4.46□□□□□ -1.7
TY1A-PR2P0CX60 NAT1YDL040C 2565 nt4.46□□□□□ -1.7
TY1A-PR2P0CX60 YHL005CYHL005C 393 nt4.45□□□□□ -1.7
TY1A-PR2P0CX60 PAU13YHL046C 363 nt4.45□□□□□ -1.7
TY1A-PR2P0CX60 YPR002C-AYPR002C-A 198 nt4.45□□□□□ -1.7
TY1A-PR2P0CX60 YCL001W-BYCL001W-B 255 nt4.45□□□□□ -1.7
TY1A-PR2P0CX60 HIR2YOR038C 2628 nt4.45□□□□□ -1.7
TY1A-PR2P0CX60 YDR015CYDR015C 240 nt4.44□□□□□ -1.7
TY1A-PR2P0CX60 SPI1YER150W 447 nt4.44□□□□□ -1.7
TY1A-PR2P0CX60 SRL3YKR091W 741 nt4.44□□□□□ -1.7
TY1A-PR2P0CX60 APC9YLR102C 798 nt4.44□□□□□ -1.7
TY1A-PR2P0CX60 DAL82YNL314W 768 nt4.44□□□□□ -1.7
TY1A-PR2P0CX60 RPL21BYPL079W 483 nt4.44□□□□□ -1.7
TY1A-PR2P0CX60 SWA2YDR320C 2007 nt4.44□□□□□ -1.7
TY1A-PR2P0CX60 DPH6YLR143W 2058 nt4.44□□□□□ -1.7
TY1A-PR2P0CX60 SEG2YKL105C 3399 nt4.44□□□□□ -1.7
TY1A-PR2P0CX60 PDR10YOR328W 4695 nt4.43□□□□□ -1.7
TY1A-PR2P0CX60 OSW2YLR054C 2175 nt4.43□□□□□ -1.7
TY1A-PR2P0CX60 YDR003W-AYDR003W-A 123 nt4.43□□□□□ -1.7
TY1A-PR2P0CX60 YOR015WYOR015W 360 nt4.43□□□□□ -1.7
TY1A-PR2P0CX60 ISM1YPL040C 3009 nt4.43□□□□□ -1.7
TY1A-PR2P0CX60 PDE2YOR360C 1581 nt4.43□□□□□ -1.7
TY1A-PR2P0CX60 CRT10YOL063C 2874 nt4.43□□□□□ -1.7
TY1A-PR2P0CX60 HDA3YPR179C 1968 nt4.42□□□□□ -1.7
TY1A-PR2P0CX60 SBE2YDR351W 2595 nt4.42□□□□□ -1.7
TY1A-PR2P0CX60 GLT1YDL171C 6438 nt4.42□□□□□ -1.7
TY1A-PR2P0CX60 SHE10YGL228W 1734 nt4.42□□□□□ -1.7
TY1A-PR2P0CX60 YGL239CYGL239C 315 nt4.42□□□□□ -1.7
TY1A-PR2P0CX60 KAR2YJL034W 2049 nt4.42□□□□□ -1.7
TY1A-PR2P0CX60 LDS2YOL047C 1071 nt4.42□□□□□ -1.7
TY1A-PR2P0CX60 KIP3YGL216W 2418 nt4.42□□□□□ -1.7
TY1A-PR2P0CX60 LCD1YDR499W 2244 nt4.41□□□□□ -1.7
TY1A-PR2P0CX60 YDL041WYDL041W 354 nt4.41□□□□□ -1.7
TY1A-PR2P0CX60 SBH1YER087C-B 249 nt4.41□□□□□ -1.7
TY1A-PR2P0CX60 YJL222W-BYJL222W-B 138 nt4.41□□□□□ -1.7
TY1A-PR2P0CX60 NDC1YML031W 1968 nt4.41□□□□□ -1.7
TY1A-PR2P0CX60 ROD1YOR018W 2514 nt4.41□□□□□ -1.7
TY1A-PR2P0CX60 RPS27AYKL156W 249 nt4.4□□□□□ -1.71
TY1A-PR2P0CX60 YNR042WYNR042W 429 nt4.4□□□□□ -1.71
TY1A-PR2P0CX60 YOR314W-AYOR314W-A 111 nt4.4□□□□□ -1.71
TY1A-PR2P0CX60 YBR131C-AYBR131C-A 90 nt4.4□□□□□ -1.71
TY1A-PR2P0CX60 GEP3YOR205C 1671 nt4.4□□□□□ -1.71
TY1A-PR2P0CX60 TFB1YDR311W 1929 nt4.4□□□□□ -1.71
TY1A-PR2P0CX60 SNT2YGL131C 4212 nt4.39□□□□□ -1.71
TY1A-PR2P0CX60 MIM2YLR099W-A 264 nt4.39□□□□□ -1.71
TY1A-PR2P0CX60 UBC4YBR082C 447 nt4.39□□□□□ -1.71
TY1A-PR2P0CX60 GDB1YPR184W 4611 nt4.39□□□□□ -1.71
TY1A-PR2P0CX60 ALO1YML086C 1581 nt4.39□□□□□ -1.71
TY1A-PR2P0CX60 FAA2YER015W 2235 nt4.38□□□□□ -1.71
TY1A-PR2P0CX60 YEL073CYEL073C 324 nt4.38□□□□□ -1.71
TY1A-PR2P0CX60 YHR213W-AYHR213W-A 234 nt4.38□□□□□ -1.71
TY1A-PR2P0CX60 NCE101YJL205C 162 nt4.38□□□□□ -1.71
TY1A-PR2P0CX60 VID28YIL017C 2766 nt4.38□□□□□ -1.71
TY1A-PR2P0CX60 NUP85YJR042W 2235 nt4.38□□□□□ -1.71
TY1A-PR2P0CX60 YDR261C-DYDR261C-D 4815 nt4.38□□□□□ -1.71
TY1A-PR2P0CX60 GPI1YGR216C 1830 nt4.37□□□□□ -1.71
TY1A-PR2P0CX60 YRA1YDR381W 681 nt4.37□□□□□ -1.71
TY1A-PR2P0CX60 GOT1YMR292W 417 nt4.37□□□□□ -1.71
TY1A-PR2P0CX60 YNL103W-AYNL103W-A 90 nt4.37□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 27.8 ms