RNA–Protein interactions for RNA: YPL030W

TRM44, Transcript of tRNA(Ser) Um(44) 2'-O-methyltransferase, yeastyeast

Gene TRM44, Length 1,704 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM44YPL030W MTC1P47018 478 aaKnown RBP8.34□□□□□ -1.07
TRM44YPL030W DRS1P32892 752 aaKnown RBP8.13□□□□□ -1.11
TRM44YPL030W RQC2Q12532 1038 aaKnown RBP7.33□□□□□ -1.24
TRM44YPL030W FAP1P53971 965 aa7.23□□□□□ -1.25
TRM44YPL030W BFR2Q06631 534 aaKnown RBP7.12□□□□□ -1.27
TRM44YPL030W DIP2Q12220 943 aaPredicted RBP7□□□□□ -1.29
TRM44YPL030W TFA1P36100 482 aa6.89□□□□□ -1.31
TRM44YPL030W ISW2Q08773 1120 aa6.87□□□□□ -1.31
TRM44YPL030W PRI1P10363 409 aa6.84□□□□□ -1.31
TRM44YPL030W AVT3P36062 692 aa6.84□□□□□ -1.31
TRM44YPL030W PRY3P47033 881 aa6.82□□□□□ -1.32
TRM44YPL030W AAD16Q02895 342 aa6.76□□□□□ -1.33
TRM44YPL030W RPG1P38249 964 aaKnown RBP6.75□□□□□ -1.33
TRM44YPL030W TAF7Q05021 590 aa6.7□□□□□ -1.34
TRM44YPL030W RSE1Q04693 1361 aaKnown RBP6.7□□□□□ -1.34
TRM44YPL030W URN1Q06525 465 aaKnown RBP6.5□□□□□ -1.37
TRM44YPL030W TSR3Q12094 313 aaKnown RBP6.46□□□□□ -1.38
TRM44YPL030W RPL17AP05740 184 aaKnown RBP6.44□□□□□ -1.38
TRM44YPL030W RPL17BP46990 184 aaKnown RBP6.44□□□□□ -1.38
TRM44YPL030W REB1P21538 810 aa6.4□□□□□ -1.38
TRM44YPL030W HAA1Q12753 694 aaKnown RBP6.4□□□□□ -1.38
TRM44YPL030W CAB3P36076 571 aa6.39□□□□□ -1.39
TRM44YPL030W EBP2P36049 427 aaKnown RBP6.35□□□□□ -1.39
TRM44YPL030W NOP2P40991 618 aaKnown RBP6.33□□□□□ -1.4
TRM44YPL030W YCK3P39962 524 aa6.3□□□□□ -1.4
TRM44YPL030W SIS2P36024 562 aa6.29□□□□□ -1.4
TRM44YPL030W MRPL32P25348 183 aa6.25□□□□□ -1.41
TRM44YPL030W SPT21P35209 758 aa6.18□□□□□ -1.42
TRM44YPL030W YRB30P53107 440 aaPredicted RBP6.13□□□□□ -1.43
TRM44YPL030W YFR016CP43597 1233 aaKnown RBP6.07□□□□□ -1.44
TRM44YPL030W RPS0BP46654 252 aaKnown RBP6.07□□□□□ -1.44
TRM44YPL030W RIM101P33400 625 aa6.05□□□□□ -1.44
TRM44YPL030W YKR023WP36119 530 aaKnown RBP6.02□□□□□ -1.45
TRM44YPL030W MNN4P36044 1178 aa5.97□□□□□ -1.45
TRM44YPL030W CDC27P38042 758 aa5.95□□□□□ -1.46
TRM44YPL030W AIM44Q99299 758 aa5.95□□□□□ -1.46
TRM44YPL030W NAP1P25293 417 aaKnown RBP5.93□□□□□ -1.46
TRM44YPL030W TFC8Q12308 588 aa5.91□□□□□ -1.46
TRM44YPL030W YGL015CP33199 130 aa5.9□□□□□ -1.47
TRM44YPL030W HOP09932 586 aa5.89□□□□□ -1.47
TRM44YPL030W KRI1P42846 591 aaKnown RBP5.89□□□□□ -1.47
TRM44YPL030W NSR1P27476 414 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
TRM44YPL030W DCD1P06773 312 aa5.84□□□□□ -1.47
TRM44YPL030W OXP1P28273 1286 aa5.83□□□□□ -1.48
TRM44YPL030W YPR148CQ06523 435 aa5.83□□□□□ -1.48
TRM44YPL030W TCB2P48231 1178 aa5.82□□□□□ -1.48
TRM44YPL030W DEF1P35732 738 aaKnown RBP5.81□□□□□ -1.48
TRM44YPL030W LEO1P38439 464 aa5.79□□□□□ -1.48
TRM44YPL030W YIL055CP40523 627 aaKnown RBP5.79□□□□□ -1.48
TRM44YPL030W UBP10P53874 792 aaPredicted RBP5.79□□□□□ -1.48
TRM44YPL030W RLF2Q12495 606 aa5.79□□□□□ -1.48
TRM44YPL030W QCR6P00127 147 aa5.78□□□□□ -1.48
TRM44YPL030W DMA1P38823 416 aa5.77□□□□□ -1.49
TRM44YPL030W PTP3P40048 928 aa5.76□□□□□ -1.49
TRM44YPL030W IOC4Q04213 475 aa5.76□□□□□ -1.49
TRM44YPL030W BUD31P25337 157 aaPredicted RBP5.74□□□□□ -1.49
TRM44YPL030W MAP2P38174 421 aaKnown RBP5.74□□□□□ -1.49
TRM44YPL030W CWC22P53333 577 aaKnown RBP5.74□□□□□ -1.49
TRM44YPL030W NOP53Q12080 455 aaKnown RBP5.74□□□□□ -1.49
TRM44YPL030W SKI3P17883 1432 aaKnown RBP5.73□□□□□ -1.49
TRM44YPL030W RIX1P38883 763 aaPredicted RBP5.73□□□□□ -1.49
TRM44YPL030W BCH2P36122 765 aa5.72□□□□□ -1.49
TRM44YPL030W PLP2Q12017 286 aa5.72□□□□□ -1.49
TRM44YPL030W YAH1Q12184 172 aaKnown RBP5.72□□□□□ -1.49
TRM44YPL030W HSP82P02829 709 aaKnown RBP5.71□□□□□ -1.49
TRM44YPL030W TOP1P04786 769 aa5.7□□□□□ -1.5
TRM44YPL030W FPR3P38911 411 aaKnown RBP5.7□□□□□ -1.5
TRM44YPL030W NUG1P40010 520 aaKnown RBP5.7□□□□□ -1.5
TRM44YPL030W RSM7P47150 247 aa5.69□□□□□ -1.5
TRM44YPL030W SCY1P53009 804 aa5.69□□□□□ -1.5
TRM44YPL030W SSP1P38871 571 aa5.68□□□□□ -1.5
TRM44YPL030W SNU71P53207 620 aaKnown RBP5.67□□□□□ -1.5
TRM44YPL030W SPT2P06843 333 aaPredicted RBP5.65□□□□□ -1.51
TRM44YPL030W PSH1Q12161 406 aa5.65□□□□□ -1.51
TRM44YPL030W ENP1P38333 483 aaKnown RBP5.64□□□□□ -1.51
TRM44YPL030W ENV11P53246 860 aa5.64□□□□□ -1.51
TRM44YPL030W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
TRM44YPL030W YLR271WQ06152 274 aa5.63□□□□□ -1.51
TRM44YPL030W SAS10Q12136 610 aaPredicted RBP5.63□□□□□ -1.51
TRM44YPL030W SLX5P32828 619 aaKnown RBP5.62□□□□□ -1.51
TRM44YPL030W EPS1P40557 701 aa5.62□□□□□ -1.51
TRM44YPL030W FUN12P39730 1002 aaKnown RBP5.62□□□□□ -1.51
TRM44YPL030W BBC1P47068 1157 aa5.62□□□□□ -1.51
TRM44YPL030W AI2P03876 854 aa5.6□□□□□ -1.51
TRM44YPL030W RNA1P11745 407 aaKnown RBP5.6□□□□□ -1.51
TRM44YPL030W RPS0AP32905 252 aaKnown RBP5.6□□□□□ -1.51
TRM44YPL030W BDF1P35817 686 aa5.58□□□□□ -1.52
TRM44YPL030W RPN1P38764 993 aaKnown RBP5.58□□□□□ -1.52
TRM44YPL030W YGR130CP53278 816 aa5.58□□□□□ -1.52
TRM44YPL030W TIF4632P39936 914 aaKnown RBP5.57□□□□□ -1.52
TRM44YPL030W FPR4Q06205 392 aaPredicted RBP5.56□□□□□ -1.52
TRM44YPL030W RLP24Q07915 199 aaKnown RBP5.56□□□□□ -1.52
TRM44YPL030W NMD2P38798 1089 aaKnown RBP5.55□□□□□ -1.52
TRM44YPL030W SPT7P35177 1332 aa5.55□□□□□ -1.52
TRM44YPL030W TCB3Q03640 1545 aaKnown RBP5.54□□□□□ -1.52
TRM44YPL030W CLC1P17891 233 aa5.54□□□□□ -1.52
TRM44YPL030W MDG1P53885 366 aa5.54□□□□□ -1.52
TRM44YPL030W INO80P53115 1489 aa5.53□□□□□ -1.52
TRM44YPL030W PIL1P53252 339 aaKnown RBP5.53□□□□□ -1.52
TRM44YPL030W YTA7P40340 1379 aa5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms