RNA–Protein interactions for RNA: YPR184W

GDB1, Transcript of Glycogen debranching enzyme, yeastyeast

Gene GDB1, Length 4,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDB1YPR184W MTC1P47018 478 aaKnown RBP7.59□□□□□ -1.19
GDB1YPR184W DRS1P32892 752 aaKnown RBP7.48□□□□□ -1.21
GDB1YPR184W SPA2P23201 1466 aaKnown RBP7.48□□□□□ -1.21
GDB1YPR184W RQC2Q12532 1038 aaKnown RBP7.42□□□□□ -1.22
GDB1YPR184W TY1B-DR4Q07793 1604 aa7.31□□□□□ -1.24
GDB1YPR184W SCT1P32784 759 aa7.24□□□□□ -1.25
GDB1YPR184W TAF7Q05021 590 aa7.21□□□□□ -1.25
GDB1YPR184W SSN2P38931 1420 aa7.19□□□□□ -1.26
GDB1YPR184W INO80P53115 1489 aa7.18□□□□□ -1.26
GDB1YPR184W SAS10Q12136 610 aaPredicted RBP7.09□□□□□ -1.27
GDB1YPR184W TFA1P36100 482 aa7.08□□□□□ -1.28
GDB1YPR184W SGS1P35187 1447 aa7.06□□□□□ -1.28
GDB1YPR184W RTT106P40161 455 aa7.06□□□□□ -1.28
GDB1YPR184W NAP1P25293 417 aaKnown RBP7.03□□□□□ -1.28
GDB1YPR184W PAF1P38351 445 aa7.01□□□□□ -1.29
GDB1YPR184W MON2P48563 1636 aaPredicted RBP7.01□□□□□ -1.29
GDB1YPR184W NUP170P38181 1502 aa6.98□□□□□ -1.29
GDB1YPR184W RSE1Q04693 1361 aaKnown RBP6.97□□□□□ -1.29
GDB1YPR184W CHD1P32657 1468 aa6.94□□□□□ -1.3
GDB1YPR184W IFH1P39520 1085 aa6.92□□□□□ -1.3
GDB1YPR184W TY1B-DR3Q99231 1755 aa6.89□□□□□ -1.31
GDB1YPR184W NOP7P53261 605 aaKnown RBP6.89□□□□□ -1.31
GDB1YPR184W SIN3P22579 1536 aa6.87□□□□□ -1.31
GDB1YPR184W SKI3P17883 1432 aaKnown RBP6.84□□□□□ -1.31
GDB1YPR184W URN1Q06525 465 aaKnown RBP6.83□□□□□ -1.32
GDB1YPR184W TY2B-LR1P0C2J3 1770 aa6.81□□□□□ -1.32
GDB1YPR184W TY2B-FP0CX63 1770 aa6.81□□□□□ -1.32
GDB1YPR184W TY2B-GR2P0CX64 1770 aa6.81□□□□□ -1.32
GDB1YPR184W TY2B-CP25384 1770 aa6.81□□□□□ -1.32
GDB1YPR184W TY2B-DR2Q03494 1770 aa6.81□□□□□ -1.32
GDB1YPR184W TY1B-DR1Q03855 1755 aa6.81□□□□□ -1.32
GDB1YPR184W TY2B-DR3Q07791 1770 aaKnown RBP6.81□□□□□ -1.32
GDB1YPR184W TY2B-OR1Q12113 1770 aa6.81□□□□□ -1.32
GDB1YPR184W TY2B-DR1Q12472 1770 aa6.81□□□□□ -1.32
GDB1YPR184W TY2B-OR2Q12501 1770 aa6.81□□□□□ -1.32
GDB1YPR184W HSL1P34244 1518 aa6.79□□□□□ -1.32
GDB1YPR184W SSK2P53599 1579 aa6.79□□□□□ -1.32
GDB1YPR184W TAF2P23255 1407 aa6.78□□□□□ -1.32
GDB1YPR184W TCB3Q03640 1545 aaKnown RBP6.76□□□□□ -1.33
GDB1YPR184W TY2B-BQ12491 1770 aa6.76□□□□□ -1.33
GDB1YPR184W MLP2P40457 1679 aa6.74□□□□□ -1.33
GDB1YPR184W ESC1Q03661 1658 aaKnown RBP6.74□□□□□ -1.33
GDB1YPR184W POL5P39985 1022 aaKnown RBP6.73□□□□□ -1.33
GDB1YPR184W ESP1Q03018 1630 aa6.73□□□□□ -1.33
GDB1YPR184W HIR3P47171 1648 aa6.72□□□□□ -1.33
GDB1YPR184W BFR2Q06631 534 aaKnown RBP6.71□□□□□ -1.33
GDB1YPR184W XRN1P22147 1528 aaKnown RBP6.7□□□□□ -1.34
GDB1YPR184W CKB1P43639 278 aa6.7□□□□□ -1.34
GDB1YPR184W FPR3P38911 411 aaKnown RBP6.69□□□□□ -1.34
GDB1YPR184W TY1B-HO13535 1793 aa6.68□□□□□ -1.34
GDB1YPR184W TY1B-DR5P0C2I2 1755 aa6.68□□□□□ -1.34
GDB1YPR184W TY1B-DR6P0C2I3 1755 aa6.68□□□□□ -1.34
GDB1YPR184W TY1B-LR2P0C2I5 1755 aa6.68□□□□□ -1.34
GDB1YPR184W TY1B-LR3P0C2I6 1755 aaKnown RBP6.68□□□□□ -1.34
GDB1YPR184W TY1B-PR1P0C2I9 1755 aaKnown RBP6.68□□□□□ -1.34
GDB1YPR184W TY1B-PR2P0C2J0 1756 aa6.68□□□□□ -1.34
GDB1YPR184W TY1B-PR3P0C2J1 1755 aaKnown RBP6.68□□□□□ -1.34
GDB1YPR184W TY1B-JR1P47098 1755 aa6.68□□□□□ -1.34
GDB1YPR184W TY1B-ML2Q03434 1755 aaKnown RBP6.68□□□□□ -1.34
GDB1YPR184W TY1B-ER1Q03612 1755 aa6.68□□□□□ -1.34
GDB1YPR184W TY1B-ML1Q04711 1755 aaKnown RBP6.68□□□□□ -1.34
GDB1YPR184W TY1B-GR2Q12269 1755 aa6.68□□□□□ -1.34
GDB1YPR184W TY1B-OLQ12273 1755 aa6.68□□□□□ -1.34
GDB1YPR184W TY1B-PLQ12414 1755 aaKnown RBP6.68□□□□□ -1.34
GDB1YPR184W UFD4P33202 1483 aa6.68□□□□□ -1.34
GDB1YPR184W BUD21Q08492 214 aaPredicted RBP6.65□□□□□ -1.34
GDB1YPR184W THO2P53552 1597 aaKnown RBP6.65□□□□□ -1.35
GDB1YPR184W BUD4P47136 1447 aa6.64□□□□□ -1.35
GDB1YPR184W MRX12P47084 519 aa6.64□□□□□ -1.35
GDB1YPR184W TY1B-BRQ12193 1756 aa6.64□□□□□ -1.35
GDB1YPR184W TY1B-GR3Q12316 1755 aa6.64□□□□□ -1.35
GDB1YPR184W TY1B-ORQ92393 1755 aa6.64□□□□□ -1.35
GDB1YPR184W SIS2P36024 562 aa6.62□□□□□ -1.35
GDB1YPR184W STH1P32597 1359 aa6.62□□□□□ -1.35
GDB1YPR184W ENP1P38333 483 aaKnown RBP6.61□□□□□ -1.35
GDB1YPR184W ATG2P53855 1592 aa6.61□□□□□ -1.35
GDB1YPR184W YTA7P40340 1379 aa6.61□□□□□ -1.35
GDB1YPR184W MMS22Q06164 1454 aa6.61□□□□□ -1.35
GDB1YPR184W TY3B-GQ99315 1547 aa6.59□□□□□ -1.35
GDB1YPR184W ABP1P15891 592 aaKnown RBP6.59□□□□□ -1.36
GDB1YPR184W MNN4P36044 1178 aa6.59□□□□□ -1.36
GDB1YPR184W PEP1P32319 1579 aa6.59□□□□□ -1.36
GDB1YPR184W ULS1Q08562 1619 aa6.57□□□□□ -1.36
GDB1YPR184W YBT1P32386 1661 aa6.56□□□□□ -1.36
GDB1YPR184W LEU3P08638 886 aa6.56□□□□□ -1.36
GDB1YPR184W TY1B-JR2P47100 1755 aaKnown RBP6.55□□□□□ -1.36
GDB1YPR184W TY1B-ER2Q03619 1755 aa6.55□□□□□ -1.36
GDB1YPR184W TY1B-MR1Q04214 1755 aa6.55□□□□□ -1.36
GDB1YPR184W TY1B-MR2Q04670 1755 aaKnown RBP6.55□□□□□ -1.36
GDB1YPR184W TY1B-LR1Q12088 1755 aaKnown RBP6.55□□□□□ -1.36
GDB1YPR184W TY1B-NL1Q12112 1755 aa6.55□□□□□ -1.36
GDB1YPR184W TY1B-GR1Q12141 1755 aa6.55□□□□□ -1.36
GDB1YPR184W TY1B-BLQ12490 1755 aa6.55□□□□□ -1.36
GDB1YPR184W SMC4Q12267 1418 aa6.54□□□□□ -1.36
GDB1YPR184W ECM5Q03214 1411 aa6.54□□□□□ -1.36
GDB1YPR184W SPT6P23615 1451 aaKnown RBP6.53□□□□□ -1.36
GDB1YPR184W REV3P14284 1504 aa6.53□□□□□ -1.36
GDB1YPR184W STU1P38198 1513 aa6.49□□□□□ -1.37
GDB1YPR184W MYO2P19524 1574 aaKnown RBP6.48□□□□□ -1.37
GDB1YPR184W YJL181WP46987 611 aa6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms