Protein–RNA interactions for Protein: Q9BWW7

SCRT1, Transcriptional repressor scratch 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1Q9BWW7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCRT1Q9BWW7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 AC005082.1-201ENST00000413042 2259 ntBASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 OR2I1P-207ENST00000453522 948 ntBASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 AC125437.2-201ENST00000625180 2167 ntBASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 AC068587.7-201ENST00000641602 218 ntBASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCRT1Q9BWW7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 AC087239.1-201ENST00000622671 572 ntBASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCRT1Q9BWW7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 AC007225.1-201ENST00000566331 1836 ntBASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 SRD5A1P1-201ENST00000442297 786 ntBASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 MIR3621-201ENST00000580529 85 ntBASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SCRT1Q9BWW7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms